Wall clock time and date at job start Sat Mar 6 2021 21:16:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34237 * 116.99834 * 2 1 4 4 O 1.20829 * 119.99648 * 0.02562 * 3 2 1 5 5 C 1.50693 * 119.99951 * 179.97438 * 3 2 1 6 6 N 1.46502 * 112.85323 * 35.51772 * 5 3 2 7 7 C 1.34777 * 120.00027 * 66.98428 * 6 5 3 8 8 O 1.21268 * 120.00125 * 354.96170 * 7 6 5 9 9 C 1.50698 * 119.99478 * 174.95563 * 7 6 5 10 10 O 1.42905 * 109.46799 * 180.02562 * 9 7 6 11 11 C 1.35996 * 116.99941 * 180.02562 * 10 9 7 12 12 C 1.39156 * 120.07602 * 180.25379 * 11 10 9 13 13 O 1.35994 * 120.07062 * 359.97438 * 12 11 10 14 14 C 1.42900 * 117.00115 * 180.30436 * 13 12 11 15 15 C 1.38562 * 119.85632 * 180.27404 * 12 11 10 16 16 C 1.38247 * 119.99737 * 359.71831 * 15 12 11 17 17 C 1.50697 * 119.92451 * 180.02562 * 16 15 12 18 18 O 1.42903 * 109.47093 * 65.02381 * 17 16 15 19 19 Si 1.86293 * 109.47183 * 185.02320 * 17 16 15 20 20 C 1.38246 * 120.14756 * 0.02562 * 16 15 12 21 21 C 1.38244 * 120.14967 * 359.97438 * 20 16 15 22 22 C 1.53777 * 113.69345 * 264.24033 * 5 3 2 23 23 C 1.53772 * 87.08736 * 220.01163 * 22 5 3 24 24 H 1.08990 * 113.61862 * 139.98219 * 23 22 5 25 25 O 1.42902 * 113.61668 * 270.88534 * 23 22 5 26 26 C 1.53779 * 87.07874 * 25.43236 * 23 22 5 27 27 H 1.08996 * 109.47112 * 60.00406 * 1 2 3 28 28 H 1.09006 * 109.46474 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47124 * 299.99765 * 1 2 3 30 30 H 0.97009 * 119.99469 * 246.99562 * 6 5 3 31 31 H 1.09004 * 109.47652 * 60.00739 * 9 7 6 32 32 H 1.09000 * 109.47592 * 300.00233 * 9 7 6 33 33 H 1.08993 * 109.47252 * 59.99517 * 14 13 12 34 34 H 1.08997 * 109.46894 * 180.02562 * 14 13 12 35 35 H 1.08996 * 109.46530 * 299.99421 * 14 13 12 36 36 H 1.08000 * 120.00227 * 179.70086 * 15 12 11 37 37 H 1.08998 * 109.47104 * 305.02530 * 17 16 15 38 38 H 0.96697 * 113.99928 * 59.99741 * 18 17 16 39 39 H 1.48503 * 110.00321 * 180.02562 * 19 17 16 40 40 H 1.48500 * 110.00129 * 301.32033 * 19 17 16 41 41 H 1.07996 * 119.92652 * 179.97438 * 20 16 15 42 42 H 1.07998 * 120.00575 * 179.97438 * 21 20 16 43 43 H 1.08998 * 113.61517 * 334.56783 * 22 5 3 44 44 H 1.09011 * 113.61082 * 105.45870 * 22 5 3 45 45 H 0.96695 * 114.00116 * 277.49812 * 25 23 22 46 46 H 1.09006 * 113.61699 * 220.01680 * 26 23 22 47 47 H 1.09000 * 113.69219 * 89.13043 * 26 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2750 0.0006 6 7 4.1923 0.2073 -0.7832 7 6 4.0356 0.1731 -2.1214 8 8 3.3030 0.9710 -2.6667 9 6 4.7709 -0.8565 -2.9400 10 8 4.4433 -0.6896 -4.3210 11 6 5.0267 -1.5460 -5.2018 12 6 4.7570 -1.4375 -6.5626 13 8 3.9090 -0.4752 -7.0147 14 6 3.6738 -0.4273 -8.4234 15 6 5.3494 -2.3161 -7.4554 16 6 6.2108 -3.2941 -6.9942 17 6 6.8546 -4.2484 -7.9666 18 8 7.7301 -3.5255 -8.8345 19 14 7.8291 -5.5286 -7.0275 20 6 6.4829 -3.3985 -5.6428 21 6 5.8952 -2.5251 -4.7467 22 6 4.1754 1.4487 1.4018 23 6 5.1713 2.4299 0.7615 24 1 5.3786 3.3053 1.3767 25 8 6.3573 1.8023 0.2697 26 6 4.1097 2.6766 -0.3234 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3632 -1.0278 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 4.7195 -0.4752 -0.3390 31 1 4.4788 -1.8552 -2.6152 32 1 5.8449 -0.7298 -2.8038 33 1 3.2449 -1.3737 -8.7525 34 1 2.9815 0.3837 -8.6488 35 1 4.6162 -0.2551 -8.9433 36 1 5.1380 -2.2372 -8.5116 37 1 6.0824 -4.7409 -8.5576 38 1 8.4434 -3.0612 -8.3757 39 1 8.4696 -6.4756 -7.9753 40 1 8.8646 -4.8676 -6.1933 41 1 7.1561 -4.1641 -5.2863 42 1 6.1091 -2.6091 -3.6914 43 1 3.4992 1.9173 2.1168 44 1 4.6425 0.5436 1.7902 45 1 7.0287 1.6445 0.9473 46 1 4.5239 2.7629 -1.3280 47 1 3.4150 3.4809 -0.0815 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12808048_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:16:56 Heat of formation + Delta-G solvation = -198.431246 kcal Electronic energy + Delta-G solvation = -34266.604341 eV Core-core repulsion = 29384.170185 eV Total energy + Delta-G solvation = -4882.434156 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.149 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.54147 -41.76781 -40.79366 -39.95483 -39.15105 -38.87911 -37.64315 -37.02836 -36.18526 -34.15817 -32.04659 -31.46727 -29.92030 -29.06929 -28.46102 -27.15695 -26.58215 -26.10843 -23.72542 -22.82149 -22.53877 -21.87505 -20.57667 -19.82997 -19.27356 -18.77159 -18.46064 -18.33385 -18.07348 -17.70683 -17.52592 -17.39002 -17.11694 -16.81158 -16.65933 -16.13569 -15.95283 -15.80357 -15.64805 -15.51068 -15.20135 -14.96048 -14.68729 -14.44867 -14.33126 -13.91446 -13.80136 -13.59091 -13.53816 -13.39535 -13.35616 -13.17212 -12.63598 -12.59842 -12.44941 -12.19026 -12.14434 -12.12638 -12.00598 -11.94174 -11.63251 -11.56518 -11.09341 -11.01547 -10.60493 -10.31593 -9.79126 -8.93078 -4.87255 0.16427 0.27666 0.85372 1.25277 1.34220 1.39226 1.64397 1.67980 2.00556 2.29946 2.45173 2.55163 2.93683 3.11741 3.33107 3.40956 3.42642 3.53016 3.65929 3.76734 3.85500 3.90734 4.03380 4.09996 4.13147 4.16319 4.18921 4.26170 4.28281 4.28750 4.34968 4.52335 4.57122 4.58107 4.63883 4.64925 4.66780 4.73068 4.76702 4.82845 5.00603 5.12448 5.20472 5.21881 5.36782 5.59127 5.94454 6.30451 6.49951 6.51200 6.52290 6.94221 7.03182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.356 6.356 3 C 0.464 3.536 4 O -0.533 6.533 5 C 0.154 3.846 6 N -0.670 5.670 7 C 0.516 3.484 8 O -0.566 6.566 9 C 0.041 3.959 10 O -0.315 6.315 11 C 0.085 3.915 12 C 0.076 3.924 13 O -0.336 6.336 14 C 0.021 3.979 15 C -0.152 4.152 16 C -0.115 4.115 17 C -0.086 4.086 18 O -0.551 6.551 19 Si 0.778 3.222 20 C -0.110 4.110 21 C -0.158 4.158 22 C -0.136 4.136 23 C 0.102 3.898 24 H 0.106 0.894 25 O -0.558 6.558 26 C -0.133 4.133 27 H 0.046 0.954 28 H 0.133 0.867 29 H 0.069 0.931 30 H 0.431 0.569 31 H 0.133 0.867 32 H 0.129 0.871 33 H 0.067 0.933 34 H 0.109 0.891 35 H 0.062 0.938 36 H 0.141 0.859 37 H 0.121 0.879 38 H 0.386 0.614 39 H -0.307 1.307 40 H -0.272 1.272 41 H 0.159 0.841 42 H 0.176 0.824 43 H 0.118 0.882 44 H 0.128 0.872 45 H 0.405 0.595 46 H 0.063 0.937 47 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.059 -6.893 8.504 12.059 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.272 6.272 3 C 0.306 3.694 4 O -0.421 6.421 5 C 0.064 3.936 6 N -0.327 5.327 7 C 0.303 3.697 8 O -0.443 6.443 9 C -0.037 4.037 10 O -0.229 6.229 11 C 0.039 3.961 12 C 0.031 3.969 13 O -0.251 6.251 14 C -0.074 4.074 15 C -0.170 4.170 16 C -0.116 4.116 17 C -0.194 4.194 18 O -0.359 6.359 19 Si 0.683 3.317 20 C -0.128 4.128 21 C -0.177 4.177 22 C -0.174 4.174 23 C 0.043 3.957 24 H 0.124 0.876 25 O -0.367 6.367 26 C -0.171 4.171 27 H 0.065 0.935 28 H 0.151 0.849 29 H 0.088 0.912 30 H 0.271 0.729 31 H 0.150 0.850 32 H 0.147 0.853 33 H 0.085 0.915 34 H 0.127 0.873 35 H 0.081 0.919 36 H 0.159 0.841 37 H 0.139 0.861 38 H 0.236 0.764 39 H -0.236 1.236 40 H -0.198 1.198 41 H 0.176 0.824 42 H 0.194 0.806 43 H 0.137 0.863 44 H 0.146 0.854 45 H 0.257 0.743 46 H 0.082 0.918 47 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges 4.123 -6.286 7.315 10.489 hybrid contribution 0.353 1.042 -0.481 1.201 sum 4.476 -5.244 6.833 9.707 Atomic orbital electron populations 1.23522 0.75227 1.05705 1.02125 1.86496 1.24604 1.32810 1.83255 1.24452 0.92620 0.81412 0.70893 1.90653 1.67298 1.37570 1.46628 1.21336 0.83006 0.91119 0.98090 1.45015 1.53400 1.29279 1.04994 1.20697 0.81170 0.84910 0.82920 1.90798 1.38916 1.42479 1.72142 1.22699 1.01851 0.99714 0.79434 1.86218 1.66426 1.53796 1.16470 1.18610 0.97231 0.93308 0.86907 1.18683 0.95083 0.92142 0.91038 1.86192 1.61278 1.50763 1.26855 1.23275 1.02338 1.03981 0.77779 1.21020 0.99945 0.96540 0.99536 1.20120 0.98682 0.97744 0.95023 1.25331 0.97989 0.99131 0.96950 1.86571 1.44077 1.68543 1.36697 0.93958 0.81341 0.77218 0.79233 1.21048 1.00532 0.99517 0.91670 1.21387 0.98255 0.95350 1.02683 1.24020 0.98723 1.03591 0.91017 1.22454 0.84594 0.95347 0.93326 0.87649 1.86465 1.27585 1.82001 1.40615 1.23473 0.97913 0.94526 1.01231 0.93533 0.84923 0.91196 0.72896 0.84992 0.85315 0.91482 0.87259 0.91918 0.84122 0.86088 0.76450 1.23592 1.19837 0.82384 0.80627 0.86344 0.85365 0.74335 0.91817 0.87294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.09 10.56 113.37 1.20 1.28 16 2 O -0.36 -2.44 10.42 -51.48 -0.54 -2.98 16 3 C 0.46 4.32 6.42 71.23 0.46 4.78 16 4 O -0.53 -8.44 15.66 21.95 0.34 -8.09 16 5 C 0.15 0.29 1.00 3.38 0.00 0.30 16 6 N -0.67 0.99 4.53 -423.95 -1.92 -0.93 16 7 C 0.52 3.15 7.39 87.66 0.65 3.80 16 8 O -0.57 -10.62 15.22 16.05 0.24 -10.38 16 9 C 0.04 -0.03 5.22 71.24 0.37 0.34 16 10 O -0.32 -3.13 9.46 -67.09 -0.63 -3.76 16 11 C 0.08 0.54 6.70 22.57 0.15 0.69 16 12 C 0.08 0.68 6.70 22.57 0.15 0.83 16 13 O -0.34 -4.17 10.28 -79.62 -0.82 -4.98 16 14 C 0.02 0.07 9.81 113.37 1.11 1.19 16 15 C -0.15 -0.65 8.67 22.35 0.19 -0.46 16 16 C -0.11 -0.03 5.35 -19.86 -0.11 -0.14 16 17 C -0.09 0.11 2.80 71.23 0.20 0.30 16 18 O -0.55 -1.27 12.83 -148.98 -1.91 -3.18 16 19 Si 0.78 -3.20 29.88 68.60 2.05 -1.15 16 20 C -0.11 0.33 8.66 22.27 0.19 0.53 16 21 C -0.16 0.34 9.04 22.35 0.20 0.54 16 22 C -0.14 1.03 7.20 31.12 0.22 1.26 16 23 C 0.10 -0.60 5.28 31.12 0.16 -0.44 16 24 H 0.11 -1.00 8.14 -2.39 -0.02 -1.02 16 25 O -0.56 3.99 13.09 -148.98 -1.95 2.04 16 26 C -0.13 -0.54 6.67 31.12 0.21 -0.34 16 27 H 0.05 0.32 8.13 -2.39 -0.02 0.30 16 28 H 0.13 -0.47 8.14 -2.38 -0.02 -0.49 16 29 H 0.07 0.13 8.13 -2.39 -0.02 0.11 16 30 H 0.43 -4.47 8.67 -92.70 -0.80 -5.28 16 31 H 0.13 -1.14 7.66 -2.38 -0.02 -1.16 16 32 H 0.13 -0.98 7.66 -2.39 -0.02 -1.00 16 33 H 0.07 0.04 7.66 -2.39 -0.02 0.03 16 34 H 0.11 0.13 8.14 -2.39 -0.02 0.11 16 35 H 0.06 0.09 7.66 -2.39 -0.02 0.08 16 36 H 0.14 0.40 6.30 -2.91 -0.02 0.38 16 37 H 0.12 -0.28 7.96 -2.39 -0.02 -0.30 16 38 H 0.39 -1.29 8.70 -74.06 -0.64 -1.94 16 39 H -0.31 -1.33 7.11 99.48 0.71 -0.62 16 40 H -0.27 0.51 7.00 99.48 0.70 1.20 16 41 H 0.16 -1.35 4.83 -2.91 -0.01 -1.37 16 42 H 0.18 -1.84 6.30 -2.91 -0.02 -1.85 16 43 H 0.12 -0.96 8.10 -2.39 -0.02 -0.98 16 44 H 0.13 -1.77 8.10 -2.38 -0.02 -1.79 16 45 H 0.40 -6.73 9.12 -74.06 -0.68 -7.41 16 46 H 0.06 0.66 7.41 -2.38 -0.02 0.64 16 47 H 0.11 0.65 7.35 -2.39 -0.02 0.63 16 Total: 0.00 -39.89 397.10 -0.80 -40.68 By element: Atomic # 1 Polarization: -20.69 SS G_CDS: -1.03 Total: -21.73 kcal Atomic # 6 Polarization: 9.09 SS G_CDS: 5.37 Total: 14.46 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -1.92 Total: -0.93 kcal Atomic # 8 Polarization: -26.07 SS G_CDS: -5.26 Total: -31.33 kcal Atomic # 14 Polarization: -3.20 SS G_CDS: 2.05 Total: -1.15 kcal Total: -39.89 -0.80 -40.68 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12808048_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.747 kcal (2) G-P(sol) polarization free energy of solvation -39.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -197.636 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds