Wall clock time and date at job start Sun Mar 7 2021 00:24:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86296 * 109.47224 * 2 1 4 4 C 1.50701 * 109.47424 * 239.99984 * 2 1 3 5 5 C 1.38240 * 119.97190 * 119.99723 * 4 2 1 6 6 C 1.38291 * 120.10777 * 179.97438 * 5 4 2 7 7 C 1.38121 * 120.05640 * 0.05364 * 6 5 4 8 8 C 1.38748 * 119.94691 * 359.97291 * 7 6 5 9 9 O 1.35903 * 120.05573 * 180.02562 * 8 7 6 10 10 C 1.42893 * 116.99999 * 0.02562 * 9 8 7 11 11 C 1.53003 * 109.46794 * 180.02562 * 10 9 8 12 12 C 1.50706 * 109.46816 * 179.97438 * 11 10 9 13 13 O 1.21284 * 119.99975 * 359.97438 * 12 11 10 14 14 N 1.34780 * 119.99897 * 179.97438 * 12 11 10 15 15 C 1.46503 * 119.99703 * 180.02562 * 14 12 11 16 16 C 1.53003 * 109.46622 * 180.02562 * 15 14 12 17 17 H 1.09006 * 112.85187 * 316.19344 * 16 15 14 18 18 C 1.53779 * 113.69268 * 87.46383 * 16 15 14 19 19 C 1.53784 * 87.08045 * 139.99100 * 18 16 15 20 20 H 1.09004 * 113.61451 * 220.02152 * 19 18 16 21 21 O 1.42896 * 113.61566 * 89.11454 * 19 18 16 22 22 C 1.53779 * 113.61005 * 185.00145 * 16 15 14 23 23 C 1.38168 * 119.96867 * 300.30339 * 4 2 1 24 24 H 0.96696 * 114.00084 * 59.99984 * 1 2 3 25 25 H 1.09005 * 109.47339 * 120.00131 * 2 1 3 26 26 H 1.48496 * 110.00016 * 298.67971 * 3 2 1 27 27 H 1.48501 * 110.00146 * 60.00251 * 3 2 1 28 28 H 1.07995 * 119.94420 * 0.02562 * 5 4 2 29 29 H 1.07999 * 119.97003 * 180.02562 * 6 5 4 30 30 H 1.07998 * 120.02386 * 179.97438 * 7 6 5 31 31 H 1.08996 * 109.47410 * 59.99941 * 10 9 8 32 32 H 1.09004 * 109.47197 * 299.99574 * 10 9 8 33 33 H 1.08996 * 109.47332 * 59.99719 * 11 10 9 34 34 H 1.08996 * 109.47070 * 299.99102 * 11 10 9 35 35 H 0.96996 * 119.99832 * 0.02562 * 14 12 11 36 36 H 1.08996 * 109.47333 * 60.00428 * 15 14 12 37 37 H 1.08996 * 109.46828 * 299.99959 * 15 14 12 38 38 H 1.09002 * 113.61557 * 25.44212 * 18 16 15 39 39 H 1.09004 * 113.61501 * 254.53633 * 18 16 15 40 40 H 0.96699 * 113.99840 * 82.49889 * 21 19 18 41 41 H 1.08997 * 113.61646 * 105.38661 * 22 16 15 42 42 H 1.08998 * 113.69354 * 334.48969 * 22 16 15 43 43 H 1.07997 * 120.03054 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7261 -0.0380 -2.1400 6 6 3.1891 -0.6873 -3.2698 7 6 2.8575 -2.0095 -3.4926 8 6 2.0595 -2.6864 -2.5815 9 8 1.7323 -3.9875 -2.7982 10 6 2.2451 -4.5964 -3.9849 11 6 1.7740 -6.0503 -4.0565 12 6 2.3143 -6.6923 -5.3083 13 8 3.0076 -6.0501 -6.0686 14 7 2.0272 -7.9802 -5.5831 15 6 2.5530 -8.6045 -6.7997 16 6 2.0817 -10.0583 -6.8714 17 1 2.1638 -10.5775 -5.9164 18 6 0.7133 -10.2316 -7.5511 19 6 1.2939 -11.4871 -8.2229 20 1 0.9924 -11.6044 -9.2639 21 8 1.1191 -12.6798 -7.4554 22 6 2.6794 -10.8420 -8.0519 23 6 1.5921 -2.0314 -1.4516 24 1 -0.3933 0.4417 -0.7650 25 1 1.7923 -0.5139 0.8900 26 1 1.5879 2.4585 -1.2242 27 1 1.5615 2.4679 1.2085 28 1 2.9864 0.9958 -1.9676 29 1 3.8102 -0.1600 -3.9787 30 1 3.2190 -2.5159 -4.3753 31 1 3.3346 -4.5676 -3.9664 32 1 1.8820 -4.0538 -4.8578 33 1 0.6846 -6.0788 -4.0752 34 1 2.1368 -6.5932 -3.1838 35 1 1.4725 -8.4937 -4.9752 36 1 3.6424 -8.5758 -6.7812 37 1 2.1900 -8.0617 -7.6725 38 1 0.4702 -9.4337 -8.2529 39 1 -0.0969 -10.4446 -6.8537 40 1 0.2496 -13.0901 -7.5588 41 1 3.4564 -11.5479 -7.7587 42 1 2.9744 -10.2122 -8.8912 43 1 0.9675 -2.5549 -0.7430 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_4549614.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:07 Heat of formation + Delta-G solvation = -103.781746 kcal Electronic energy + Delta-G solvation = -24052.845467 eV Core-core repulsion = 20258.788338 eV Total energy + Delta-G solvation = -3794.057129 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.38511 -41.00180 -40.23148 -39.08931 -37.32796 -36.58801 -34.98505 -33.35660 -32.42669 -30.89338 -29.03733 -26.97688 -26.87406 -25.31534 -23.64063 -23.47253 -22.05983 -21.53524 -20.62058 -19.34254 -18.42508 -18.00080 -17.67948 -17.52456 -17.22569 -17.07030 -16.75581 -16.55996 -16.20044 -16.03472 -15.65913 -15.44746 -14.90621 -14.73194 -14.65201 -14.37389 -14.04326 -14.03215 -13.76994 -13.54627 -13.19628 -13.09654 -12.88209 -12.83341 -12.37573 -12.26484 -12.01171 -11.91315 -11.80182 -11.53117 -11.33756 -11.07700 -10.77119 -10.63135 -10.17270 -9.87499 -9.20144 -4.92843 0.25841 0.45569 1.29230 1.52643 1.63130 1.70137 1.98611 2.46860 2.71920 2.94153 3.38315 3.40463 3.44565 3.52131 3.58914 3.66529 3.79765 3.82212 3.85936 3.93752 4.09248 4.16101 4.24754 4.29536 4.34231 4.37252 4.53655 4.56499 4.56815 4.60915 4.61911 4.69068 4.72677 4.73629 4.89078 5.01688 5.02097 5.17337 5.31296 5.35537 5.42529 5.48646 5.72812 6.32911 6.41665 6.42143 6.55046 7.08573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.689 3.311 4 C -0.081 4.081 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.075 3.925 11 C -0.142 4.142 12 C 0.519 3.481 13 O -0.540 6.540 14 N -0.727 5.727 15 C 0.127 3.873 16 C -0.118 4.118 17 H 0.101 0.899 18 C -0.168 4.168 19 C 0.077 3.923 20 H 0.071 0.929 21 O -0.552 6.552 22 C -0.125 4.125 23 C -0.126 4.126 24 H 0.376 0.624 25 H 0.120 0.880 26 H -0.260 1.260 27 H -0.257 1.257 28 H 0.129 0.871 29 H 0.131 0.869 30 H 0.132 0.868 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.107 0.893 34 H 0.108 0.892 35 H 0.404 0.596 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.091 0.909 39 H 0.074 0.926 40 H 0.383 0.617 41 H 0.081 0.919 42 H 0.098 0.902 43 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.278 -2.574 -1.592 3.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.305 3.695 13 O -0.417 6.417 14 N -0.379 5.379 15 C 0.004 3.996 16 C -0.137 4.137 17 H 0.119 0.881 18 C -0.206 4.206 19 C 0.017 3.983 20 H 0.088 0.912 21 O -0.358 6.358 22 C -0.163 4.163 23 C -0.145 4.145 24 H 0.224 0.776 25 H 0.138 0.862 26 H -0.185 1.185 27 H -0.182 1.182 28 H 0.146 0.854 29 H 0.148 0.852 30 H 0.150 0.850 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.125 0.875 34 H 0.126 0.874 35 H 0.238 0.762 36 H 0.090 0.910 37 H 0.089 0.911 38 H 0.109 0.891 39 H 0.093 0.907 40 H 0.231 0.769 41 H 0.100 0.900 42 H 0.117 0.883 43 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 0.599 -1.589 -1.310 2.145 hybrid contribution -1.805 -0.632 -0.675 2.029 sum -1.206 -2.221 -1.986 3.214 Atomic orbital electron populations 1.86601 1.17581 1.80005 1.49310 1.25079 0.84060 1.11099 0.98321 0.94882 0.91758 0.74189 0.80175 1.20071 0.97674 0.93860 0.96530 1.20925 1.00850 0.99998 0.95469 1.20929 0.97822 0.93690 0.96677 1.21399 1.03102 0.96497 1.01076 1.18961 0.94634 0.83197 0.94504 1.85976 1.71137 1.22746 1.43168 1.22414 0.99358 0.92079 0.86238 1.21469 1.03878 0.95418 0.97391 1.20299 0.80310 0.81856 0.87024 1.90754 1.38090 1.62670 1.50146 1.45955 1.53978 1.12174 1.25797 1.21445 0.99280 0.91868 0.87032 1.22756 0.96862 0.94364 0.99696 0.88089 1.23759 0.97105 0.99119 1.00598 1.22675 0.97330 0.84300 0.93948 0.91156 1.86463 1.39367 1.39965 1.69958 1.23026 0.96509 0.98444 0.98273 1.20239 1.03093 0.93999 0.97126 0.77603 0.86201 1.18503 1.18233 0.85397 0.85150 0.84971 0.90860 0.90969 0.87494 0.87424 0.76199 0.91027 0.91082 0.89060 0.90694 0.76893 0.90017 0.88311 0.84823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.94 12.76 -35.23 -0.45 -1.39 16 2 C -0.08 -0.03 2.82 36.01 0.10 0.07 16 3 Si 0.69 -0.40 29.79 -169.99 -5.06 -5.47 16 4 C -0.08 -0.09 5.39 -104.65 -0.56 -0.65 16 5 C -0.15 -0.06 8.67 -39.56 -0.34 -0.40 16 6 C -0.07 -0.04 10.04 -39.60 -0.40 -0.44 16 7 C -0.20 -0.30 9.04 -39.44 -0.36 -0.66 16 8 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 9 O -0.32 -0.69 10.14 -19.44 -0.20 -0.88 16 10 C 0.07 0.04 4.03 37.16 0.15 0.19 16 11 C -0.14 0.20 6.07 -27.88 -0.17 0.03 16 12 C 0.52 0.33 7.83 -10.98 -0.09 0.24 16 13 O -0.54 -2.51 15.98 5.55 0.09 -2.42 16 14 N -0.73 1.10 5.56 -60.29 -0.33 0.76 16 15 C 0.13 -0.13 5.52 -4.04 -0.02 -0.16 16 16 C -0.12 0.24 3.68 -89.81 -0.33 -0.09 16 17 H 0.10 -0.16 8.14 -51.93 -0.42 -0.59 16 18 C -0.17 0.42 7.47 -25.92 -0.19 0.23 16 19 C 0.08 -0.13 5.28 -25.91 -0.14 -0.27 16 20 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 21 O -0.55 0.30 13.59 -35.23 -0.48 -0.18 16 22 C -0.12 0.21 7.47 -25.92 -0.19 0.01 16 23 C -0.13 -0.28 9.55 -39.43 -0.38 -0.66 16 24 H 0.38 -0.38 8.70 45.56 0.40 0.02 16 25 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 26 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 27 H -0.26 -0.68 7.11 56.52 0.40 -0.27 16 28 H 0.13 -0.19 4.87 -52.49 -0.26 -0.45 16 29 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 30 H 0.13 0.07 6.30 -52.49 -0.33 -0.26 16 31 H 0.07 0.07 7.62 -51.93 -0.40 -0.33 16 32 H 0.07 0.07 7.62 -51.93 -0.40 -0.33 16 33 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 34 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 35 H 0.40 -1.59 8.47 -40.82 -0.35 -1.93 16 36 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 37 H 0.07 -0.02 7.85 -51.93 -0.41 -0.43 16 38 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 39 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 40 H 0.38 -1.70 9.12 45.56 0.42 -1.29 16 41 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 43 H 0.13 0.29 8.06 -52.49 -0.42 -0.14 16 LS Contribution 359.18 15.07 5.41 5.41 Total: 0.00 -8.82 359.18 -9.77 -18.59 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -5.57 Total: -11.95 kcal Atomic # 6 Polarization: 0.71 SS G_CDS: -3.18 Total: -2.47 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -0.33 Total: 0.76 kcal Atomic # 8 Polarization: -3.84 SS G_CDS: -1.04 Total: -4.87 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: -5.06 Total: -5.47 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -8.82 -9.77 -18.59 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_4549614.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.191 kcal (2) G-P(sol) polarization free energy of solvation -8.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.013 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.591 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds