Wall clock time and date at job start Sun Mar 7 2021 00:24:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36546 * 126.64567 * 2 1 4 4 C 1.46660 * 125.98582 * 0.02562 * 3 2 1 5 5 O 1.21691 * 120.00382 * 359.97438 * 4 3 2 6 6 N 1.34783 * 119.99751 * 180.02562 * 4 3 2 7 7 C 1.46500 * 119.99743 * 179.97438 * 6 4 3 8 8 C 1.53004 * 109.46811 * 179.97438 * 7 6 4 9 9 H 1.08999 * 112.85006 * 316.19565 * 8 7 6 10 10 C 1.53774 * 113.61238 * 87.50152 * 8 7 6 11 11 C 1.53785 * 87.07929 * 139.98145 * 10 8 7 12 12 H 1.09007 * 113.68828 * 220.00958 * 11 10 8 13 13 O 1.42901 * 113.61544 * 89.11749 * 11 10 8 14 14 C 1.53777 * 113.61150 * 184.99996 * 8 7 6 15 15 O 1.34907 * 108.02708 * 180.02562 * 3 2 1 16 16 C 1.33937 * 109.38189 * 359.97438 * 15 3 2 17 17 C 1.50700 * 125.61751 * 179.97438 * 16 15 3 18 18 O 1.42904 * 109.47010 * 270.03114 * 17 16 15 19 19 C 1.35897 * 117.00004 * 180.02562 * 18 17 16 20 20 C 1.38732 * 120.05687 * 179.97438 * 19 18 17 21 21 C 1.38147 * 119.94607 * 180.02562 * 20 19 18 22 22 C 1.38261 * 120.05350 * 0.02562 * 21 20 19 23 23 C 1.50698 * 119.94321 * 179.97438 * 22 21 20 24 24 O 1.42895 * 109.47614 * 64.99728 * 23 22 21 25 25 Si 1.86300 * 109.47338 * 184.99728 * 23 22 21 26 26 C 1.38268 * 120.11255 * 0.24426 * 22 21 20 27 27 C 1.38144 * 120.05801 * 359.45872 * 26 22 21 28 28 C 1.35125 * 108.76826 * 0.24325 * 16 15 3 29 29 H 1.09003 * 109.47035 * 89.99542 * 1 2 3 30 30 H 1.08992 * 109.47403 * 210.00148 * 1 2 3 31 31 H 1.08999 * 109.46954 * 330.00222 * 1 2 3 32 32 H 0.96995 * 119.99695 * 359.97438 * 6 4 3 33 33 H 1.08994 * 109.47121 * 299.99655 * 7 6 4 34 34 H 1.08999 * 109.47081 * 60.00312 * 7 6 4 35 35 H 1.08997 * 113.61705 * 254.52356 * 10 8 7 36 36 H 1.09001 * 113.62224 * 25.43661 * 10 8 7 37 37 H 0.96693 * 114.00037 * 82.50697 * 13 11 10 38 38 H 1.09001 * 113.61700 * 334.56781 * 14 8 7 39 39 H 1.09002 * 113.61704 * 105.38920 * 14 8 7 40 40 H 1.08994 * 109.47350 * 150.02573 * 17 16 15 41 41 H 1.09000 * 109.47068 * 30.02342 * 17 16 15 42 42 H 1.08003 * 120.02744 * 359.97438 * 20 19 18 43 43 H 1.07997 * 119.97386 * 179.97438 * 21 20 19 44 44 H 1.09001 * 109.47122 * 304.99803 * 23 22 21 45 45 H 0.96698 * 114.00355 * 180.02562 * 24 23 22 46 46 H 1.48506 * 110.00048 * 300.00058 * 25 23 22 47 47 H 1.48502 * 109.99996 * 61.31383 * 25 23 22 48 48 H 1.08005 * 119.97117 * 179.70203 * 26 22 21 49 49 H 1.07993 * 120.03030 * 180.24634 * 27 26 22 50 50 H 1.08001 * 126.44781 * 179.72302 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3220 1.0956 0.0000 4 6 1.8842 2.4953 0.0005 5 8 0.6968 2.7615 0.0006 6 7 2.7971 3.4869 -0.0001 7 6 2.3598 4.8851 -0.0001 8 6 3.5844 5.8024 -0.0002 9 1 4.3578 5.4760 0.6951 10 6 4.1141 6.1225 -1.4078 11 6 4.3458 7.5584 -0.9085 12 1 4.0887 8.3237 -1.6411 13 8 5.6341 7.7604 -0.3240 14 6 3.2358 7.2951 0.1226 15 8 3.6005 0.6649 -0.0006 16 6 3.6183 -0.6744 -0.0004 17 6 4.8550 -1.5356 -0.0014 18 8 5.2450 -1.8075 -1.3491 19 6 6.3502 -2.5778 -1.5281 20 6 6.7852 -2.8817 -2.8099 21 6 7.9086 -3.6654 -2.9892 22 6 8.5989 -4.1473 -1.8925 23 6 9.8238 -5.0025 -2.0910 24 8 10.8484 -4.2289 -2.7183 25 14 10.4300 -5.6122 -0.4383 26 6 8.1642 -3.8505 -0.6139 27 6 7.0450 -3.0621 -0.4292 28 6 2.3449 -1.1262 -0.0051 29 1 -0.3633 0.0001 -1.0277 30 1 -0.3634 -0.8899 0.5138 31 1 -0.3633 0.8900 0.5138 32 1 3.7436 3.2747 -0.0005 33 1 1.7606 5.0783 -0.8898 34 1 1.7614 5.0786 0.8901 35 1 5.0337 5.5939 -1.6590 36 1 3.3557 6.0483 -2.1872 37 1 6.3363 7.9265 -0.9675 38 1 2.2372 7.5414 -0.2383 39 1 3.4449 7.7128 1.1075 40 1 4.6449 -2.4737 0.5123 41 1 5.6621 -1.0130 0.5119 42 1 6.2455 -2.5065 -3.6669 43 1 8.2474 -3.9025 -3.9869 44 1 9.5735 -5.8545 -2.7231 45 1 11.6679 -4.7168 -2.8776 46 1 10.7747 -4.4599 0.4329 47 1 9.3853 -6.4446 0.2104 48 1 8.7025 -4.2321 0.2412 49 1 6.7081 -2.8273 0.5696 50 1 2.0306 -2.1594 -0.0104 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12857620_4549632.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:18 Heat of formation + Delta-G solvation = -77.567364 kcal Electronic energy + Delta-G solvation = -32612.062846 eV Core-core repulsion = 27960.244225 eV Total energy + Delta-G solvation = -4651.818621 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -43.87929 -41.36105 -40.94642 -40.03025 -39.19784 -37.29209 -36.63240 -35.41749 -34.72562 -33.28129 -32.15217 -31.68752 -29.71203 -28.82267 -27.56416 -26.82964 -26.19087 -24.31550 -23.72289 -22.74885 -22.34246 -22.14470 -21.06673 -20.48424 -19.56522 -19.24328 -18.44479 -18.09907 -17.76292 -17.42735 -17.24598 -16.91804 -16.77317 -16.54342 -16.44583 -16.00020 -15.79684 -15.57283 -15.39169 -15.15714 -14.73104 -14.54659 -14.39620 -14.32739 -14.00402 -13.98982 -13.89432 -13.88061 -13.72093 -13.61836 -13.49269 -13.34924 -13.02710 -12.77403 -12.49184 -12.25156 -12.22545 -11.97410 -11.96720 -11.88494 -11.30432 -11.18595 -10.77658 -10.73939 -10.35363 -10.23480 -10.11184 -9.63567 -9.28790 -5.01973 -0.16756 0.20608 0.23246 1.00677 1.24061 1.39770 1.58914 1.91673 2.02193 2.12480 2.32241 2.55861 2.98167 3.24266 3.38009 3.43748 3.48459 3.58138 3.60665 3.66850 3.68599 3.73224 3.83047 3.84271 3.90800 3.94709 4.17614 4.19721 4.30591 4.33043 4.35612 4.39776 4.47534 4.57437 4.58809 4.61466 4.64206 4.73938 4.76077 4.80641 4.85758 4.92677 4.99122 5.04487 5.08371 5.10840 5.16555 5.19158 5.32565 5.43779 5.44754 5.60028 5.73587 6.18906 6.37611 6.59065 6.59079 7.02071 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C -0.084 4.084 3 C -0.073 4.073 4 C 0.604 3.396 5 O -0.513 6.513 6 N -0.718 5.718 7 C 0.127 3.873 8 C -0.119 4.119 9 H 0.101 0.899 10 C -0.169 4.169 11 C 0.077 3.923 12 H 0.071 0.929 13 O -0.552 6.552 14 C -0.123 4.123 15 O -0.156 6.156 16 C 0.010 3.990 17 C 0.139 3.861 18 O -0.307 6.307 19 C 0.135 3.865 20 C -0.145 4.145 21 C -0.048 4.048 22 C -0.111 4.111 23 C -0.067 4.067 24 O -0.546 6.546 25 Si 0.681 3.319 26 C -0.081 4.081 27 C -0.203 4.203 28 C -0.182 4.182 29 H 0.077 0.923 30 H 0.070 0.930 31 H 0.088 0.912 32 H 0.406 0.594 33 H 0.075 0.925 34 H 0.075 0.925 35 H 0.074 0.926 36 H 0.092 0.908 37 H 0.383 0.617 38 H 0.099 0.901 39 H 0.081 0.919 40 H 0.102 0.898 41 H 0.086 0.914 42 H 0.137 0.863 43 H 0.136 0.864 44 H 0.074 0.926 45 H 0.382 0.618 46 H -0.251 1.251 47 H -0.255 1.255 48 H 0.122 0.878 49 H 0.133 0.867 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.265 -2.817 -1.056 5.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.087 4.087 3 C -0.126 4.126 4 C 0.390 3.610 5 O -0.391 6.391 6 N -0.370 5.370 7 C 0.004 3.996 8 C -0.138 4.138 9 H 0.119 0.881 10 C -0.206 4.206 11 C 0.018 3.982 12 H 0.089 0.911 13 O -0.358 6.358 14 C -0.161 4.161 15 O -0.052 6.052 16 C -0.042 4.042 17 C 0.064 3.936 18 O -0.221 6.221 19 C 0.090 3.910 20 C -0.163 4.163 21 C -0.066 4.066 22 C -0.111 4.111 23 C -0.178 4.178 24 O -0.353 6.353 25 Si 0.582 3.418 26 C -0.099 4.099 27 C -0.222 4.222 28 C -0.201 4.201 29 H 0.096 0.904 30 H 0.089 0.911 31 H 0.107 0.893 32 H 0.241 0.759 33 H 0.093 0.907 34 H 0.093 0.907 35 H 0.093 0.907 36 H 0.110 0.890 37 H 0.231 0.769 38 H 0.118 0.882 39 H 0.100 0.900 40 H 0.120 0.880 41 H 0.104 0.896 42 H 0.155 0.845 43 H 0.154 0.846 44 H 0.092 0.908 45 H 0.230 0.770 46 H -0.176 1.176 47 H -0.180 1.180 48 H 0.139 0.861 49 H 0.150 0.850 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 2.591 -1.933 0.269 3.244 hybrid contribution 0.405 -0.060 -0.628 0.750 sum 2.996 -1.993 -0.359 3.616 Atomic orbital electron populations 1.20475 0.87637 1.03953 1.03283 1.20687 0.97955 0.90648 0.99390 1.21890 0.81147 0.94887 1.14643 1.16477 0.85746 0.81723 0.77010 1.90879 1.15576 1.82223 1.50375 1.45898 1.10031 1.06285 1.74741 1.21513 0.96478 0.78615 1.02959 1.22761 0.97415 0.95055 0.98528 0.88079 1.23763 1.02280 0.97860 0.96715 1.22673 0.84538 0.95426 0.95554 0.91116 1.86460 1.17612 1.94064 1.37637 1.23022 0.97993 0.94446 1.00671 1.83976 1.28545 1.21754 1.70921 1.21879 0.95900 0.80649 1.05727 1.20946 0.92130 0.97146 0.83355 1.86151 1.41996 1.66165 1.27760 1.18954 0.86362 0.91393 0.94263 1.20533 0.98638 1.02224 0.94950 1.20851 0.92546 0.94198 0.99034 1.19266 0.96902 1.01717 0.93229 1.24607 0.88827 0.95744 1.08581 1.86496 1.25441 1.40732 1.82583 0.95301 0.87829 0.82664 0.75958 1.20681 0.96126 0.96971 0.96103 1.21137 0.98915 1.03813 0.98297 1.21603 0.91107 1.00624 1.06789 0.90429 0.91068 0.89307 0.75890 0.90712 0.90693 0.90691 0.88977 0.76897 0.88245 0.89991 0.88037 0.89590 0.84510 0.84573 0.90813 0.77041 1.17611 1.18006 0.86107 0.84956 0.82071 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.17 9.82 36.01 0.35 0.18 16 2 C -0.08 -0.24 6.20 -104.43 -0.65 -0.89 16 3 C -0.07 -0.25 7.13 -36.79 -0.26 -0.51 16 4 C 0.60 2.21 7.79 -12.86 -0.10 2.11 16 5 O -0.51 -3.10 14.74 5.20 0.08 -3.03 16 6 N -0.72 -0.77 5.55 -61.62 -0.34 -1.11 16 7 C 0.13 0.01 5.51 -4.04 -0.02 -0.01 16 8 C -0.12 0.11 3.69 -89.81 -0.33 -0.22 16 9 H 0.10 -0.03 8.14 -51.93 -0.42 -0.45 16 10 C -0.17 0.23 7.46 -25.92 -0.19 0.04 16 11 C 0.08 -0.07 5.28 -25.92 -0.14 -0.21 16 12 H 0.07 -0.14 8.14 -51.92 -0.42 -0.56 16 13 O -0.55 -0.13 13.59 -35.23 -0.48 -0.61 16 14 C -0.12 0.12 7.47 -25.92 -0.19 -0.07 16 15 O -0.16 -0.42 10.40 5.00 0.05 -0.37 16 16 C 0.01 0.02 6.94 -35.42 -0.25 -0.23 16 17 C 0.14 -0.04 5.27 36.01 0.19 0.14 16 18 O -0.31 -0.65 10.12 -19.42 -0.20 -0.85 16 19 C 0.14 0.28 6.69 -39.21 -0.26 0.02 16 20 C -0.14 -0.27 9.99 -39.43 -0.39 -0.67 16 21 C -0.05 -0.08 9.68 -39.61 -0.38 -0.46 16 22 C -0.11 -0.22 5.39 -104.60 -0.56 -0.79 16 23 C -0.07 0.02 2.79 36.00 0.10 0.12 16 24 O -0.55 0.00 12.81 -35.23 -0.45 -0.45 16 25 Si 0.68 -0.88 29.84 -169.99 -5.07 -5.95 16 26 C -0.08 -0.16 8.66 -39.60 -0.34 -0.51 16 27 C -0.20 -0.26 9.04 -39.43 -0.36 -0.62 16 28 C -0.18 -0.26 10.73 -39.89 -0.43 -0.69 16 29 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 30 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 31 H 0.09 0.28 6.44 -51.93 -0.33 -0.06 16 32 H 0.41 -0.13 8.23 -40.82 -0.34 -0.47 16 33 H 0.07 0.03 7.84 -51.93 -0.41 -0.38 16 34 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 35 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 37 H 0.38 -1.40 9.12 45.56 0.42 -0.99 16 38 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 39 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 40 H 0.10 -0.27 7.66 -51.93 -0.40 -0.67 16 41 H 0.09 -0.14 7.66 -51.93 -0.40 -0.53 16 42 H 0.14 0.09 8.06 -52.48 -0.42 -0.33 16 43 H 0.14 0.01 8.06 -52.49 -0.42 -0.41 16 44 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 45 H 0.38 -1.92 8.74 45.56 0.40 -1.52 16 46 H -0.25 -0.46 7.05 56.52 0.40 -0.06 16 47 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 48 H 0.12 0.16 4.86 -52.48 -0.26 -0.10 16 49 H 0.13 -0.15 6.30 -52.49 -0.33 -0.48 16 50 H 0.16 -0.14 8.06 -52.49 -0.42 -0.56 16 LS Contribution 418.69 15.07 6.31 6.31 Total: 0.00 -9.93 418.69 -10.64 -20.57 By element: Atomic # 1 Polarization: -4.95 SS G_CDS: -6.32 Total: -11.27 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -4.22 Total: -3.25 kcal Atomic # 7 Polarization: -0.77 SS G_CDS: -0.34 Total: -1.11 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -1.00 Total: -5.30 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.07 Total: -5.95 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -9.93 -10.64 -20.57 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_4549632.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.994 kcal (2) G-P(sol) polarization free energy of solvation -9.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.640 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.567 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds