Wall clock time and date at job start Sun Mar 7 2021 00:24:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35985 * 116.99979 * 2 1 4 4 C 1.38682 * 120.00036 * 180.02562 * 3 2 1 5 5 C 1.38149 * 119.99798 * 179.97438 * 4 3 2 6 6 C 1.50705 * 120.00055 * 179.97438 * 5 4 3 7 7 O 1.42908 * 109.46603 * 255.00069 * 6 5 4 8 8 Si 1.86298 * 109.46780 * 14.99368 * 6 5 4 9 9 C 1.38684 * 120.00226 * 0.25280 * 5 4 3 10 10 O 1.35982 * 120.00111 * 179.72562 * 9 5 4 11 11 C 1.42891 * 116.99888 * 180.02562 * 10 9 5 12 12 C 1.50701 * 109.47119 * 179.97438 * 11 10 9 13 13 O 1.21287 * 119.99921 * 359.97438 * 12 11 10 14 14 N 1.34776 * 120.00296 * 179.97438 * 12 11 10 15 15 C 1.46499 * 120.00278 * 179.97438 * 14 12 11 16 16 C 1.53001 * 109.47159 * 179.97438 * 15 14 12 17 17 H 1.09000 * 112.85173 * 43.80674 * 16 15 14 18 18 C 1.53788 * 113.61244 * 175.00213 * 16 15 14 19 19 C 1.53776 * 87.07817 * 139.98171 * 18 16 15 20 20 H 1.09000 * 113.61439 * 219.93183 * 19 18 16 21 21 O 1.42902 * 113.61657 * 89.11830 * 19 18 16 22 22 C 1.53773 * 87.08499 * 334.56849 * 19 18 16 23 23 C 1.38716 * 119.99704 * 359.53743 * 9 5 4 24 24 C 1.38111 * 120.00096 * 0.41800 * 23 9 5 25 25 H 1.09000 * 109.47211 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47103 * 299.99630 * 1 2 3 27 27 H 1.09004 * 109.47576 * 59.99598 * 1 2 3 28 28 H 1.07995 * 120.00037 * 0.02562 * 4 3 2 29 29 H 1.08991 * 109.47403 * 134.99585 * 6 5 4 30 30 H 0.96700 * 113.99903 * 299.99099 * 7 6 5 31 31 H 1.48506 * 109.99834 * 60.00830 * 8 6 5 32 32 H 1.48502 * 110.00011 * 181.32094 * 8 6 5 33 33 H 1.08992 * 109.47314 * 299.99623 * 11 10 9 34 34 H 1.09002 * 109.47266 * 60.00167 * 11 10 9 35 35 H 0.97002 * 119.99699 * 0.02562 * 14 12 11 36 36 H 1.09002 * 109.47065 * 300.00091 * 15 14 12 37 37 H 1.08996 * 109.46979 * 59.99958 * 15 14 12 38 38 H 1.08998 * 113.61041 * 254.52947 * 18 16 15 39 39 H 1.09001 * 113.61484 * 25.34700 * 18 16 15 40 40 H 0.96692 * 114.00291 * 180.02562 * 21 19 18 41 41 H 1.09001 * 113.61415 * 270.88828 * 22 19 18 42 42 H 1.09002 * 113.62019 * 139.98413 * 22 19 18 43 43 H 1.07995 * 119.99888 * 180.23091 * 23 9 5 44 44 H 1.07996 * 119.99841 * 179.81194 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0583 2.5152 -0.0011 6 6 5.5633 2.5941 -0.0011 7 8 6.0206 2.9679 1.3003 8 14 6.2723 0.9321 -0.4547 9 6 3.3030 3.6783 0.0042 10 8 3.9204 4.8899 0.0093 11 6 3.0804 6.0458 0.0152 12 6 3.9346 7.2874 0.0209 13 8 5.1437 7.1916 0.0205 14 7 3.3550 8.5041 0.0265 15 6 4.1853 9.7111 0.0326 16 6 3.2860 10.9489 0.0375 17 1 2.4502 10.8621 0.7317 18 6 4.0595 12.2718 0.1668 19 6 3.0773 12.8555 -0.8624 20 1 3.5493 13.5141 -1.5915 21 8 1.9056 13.4259 -0.2761 22 6 2.8753 11.4175 -1.3684 23 6 1.9178 3.6056 0.0004 24 6 1.2908 2.3750 0.0000 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 4.0194 0.3785 -0.0014 29 1 5.8881 3.3384 -0.7280 30 1 5.6900 3.8250 1.6022 31 1 5.8042 0.5320 -1.8061 32 1 7.7560 0.9882 -0.4273 33 1 2.4506 6.0419 -0.8743 34 1 2.4518 6.0337 0.9056 35 1 2.3880 8.5807 0.0272 36 1 4.8142 9.7149 0.9229 37 1 4.8150 9.7234 -0.8570 38 1 3.9809 12.7287 1.1533 39 1 5.0870 12.2137 -0.1922 40 1 1.2839 13.7944 -0.9185 41 1 3.5787 11.1263 -2.1485 42 1 1.8410 11.1848 -1.6214 43 1 1.3296 4.5113 0.0007 44 1 0.2123 2.3185 0.0000 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12857620_4974302.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:24:42 Heat of formation + Delta-G solvation = -134.482940 kcal Electronic energy + Delta-G solvation = -27074.329490 eV Core-core repulsion = 22960.258866 eV Total energy + Delta-G solvation = -4114.070625 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -41.84766 -41.06925 -40.33944 -39.72715 -38.14824 -36.96108 -36.52116 -35.01033 -32.83331 -31.29516 -30.17064 -28.24052 -27.76403 -26.72109 -26.60273 -24.04237 -23.26560 -22.42512 -21.80888 -20.55067 -19.55075 -18.81941 -18.72359 -18.11374 -17.87350 -17.57404 -17.39805 -16.99446 -16.65183 -16.41231 -16.13340 -15.85936 -15.62266 -15.54192 -15.43715 -15.10505 -14.50289 -14.47428 -14.14831 -14.12025 -13.87612 -13.54872 -13.44364 -13.38885 -13.05785 -12.97977 -12.52533 -12.31039 -12.20294 -12.03671 -11.87273 -11.45849 -11.32405 -11.26410 -11.20223 -11.07024 -10.65774 -10.24285 -10.10890 -8.83488 -4.94141 0.05290 0.32069 1.32725 1.39556 1.43171 1.57448 1.90798 2.34187 2.52936 2.56337 3.14105 3.40803 3.51575 3.57973 3.61845 3.71937 3.74409 3.84299 3.92579 3.95302 4.03885 4.08118 4.11969 4.20093 4.23819 4.26787 4.44494 4.44972 4.47213 4.61075 4.69244 4.74292 4.79321 4.80049 4.84876 4.96335 5.02348 5.11164 5.12807 5.19613 5.24474 5.40046 5.42546 6.10876 6.37910 6.44472 6.50100 6.85297 7.06469 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.119 4.119 6 C -0.083 4.083 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.089 3.911 10 O -0.317 6.317 11 C 0.039 3.961 12 C 0.511 3.489 13 O -0.573 6.573 14 N -0.708 5.708 15 C 0.131 3.869 16 C -0.107 4.107 17 H 0.103 0.897 18 C -0.133 4.133 19 C 0.074 3.926 20 H 0.079 0.921 21 O -0.572 6.572 22 C -0.159 4.159 23 C -0.160 4.160 24 C -0.161 4.161 25 H 0.114 0.886 26 H 0.067 0.933 27 H 0.066 0.934 28 H 0.153 0.847 29 H 0.061 0.939 30 H 0.371 0.629 31 H -0.263 1.263 32 H -0.294 1.294 33 H 0.123 0.877 34 H 0.126 0.874 35 H 0.420 0.580 36 H 0.058 0.942 37 H 0.063 0.937 38 H 0.070 0.930 39 H 0.105 0.895 40 H 0.398 0.602 41 H 0.094 0.906 42 H 0.082 0.918 43 H 0.167 0.833 44 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.398 2.663 -1.582 10.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.120 4.120 6 C -0.190 4.190 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.231 6.231 11 C -0.039 4.039 12 C 0.297 3.703 13 O -0.452 6.452 14 N -0.362 5.362 15 C 0.008 3.992 16 C -0.126 4.126 17 H 0.121 0.879 18 C -0.170 4.170 19 C 0.015 3.985 20 H 0.097 0.903 21 O -0.380 6.380 22 C -0.197 4.197 23 C -0.178 4.178 24 C -0.180 4.180 25 H 0.133 0.867 26 H 0.086 0.914 27 H 0.085 0.915 28 H 0.170 0.830 29 H 0.079 0.921 30 H 0.220 0.780 31 H -0.189 1.189 32 H -0.222 1.222 33 H 0.141 0.859 34 H 0.143 0.857 35 H 0.257 0.743 36 H 0.076 0.924 37 H 0.081 0.919 38 H 0.088 0.912 39 H 0.123 0.877 40 H 0.249 0.751 41 H 0.112 0.888 42 H 0.101 0.899 43 H 0.184 0.816 44 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -8.187 1.278 -1.635 8.446 hybrid contribution -1.062 2.251 -0.811 2.618 sum -9.249 3.529 -2.446 10.198 Atomic orbital electron populations 1.23357 0.76376 1.05625 1.02364 1.86088 1.23396 1.26279 1.88920 1.18978 0.91930 0.85363 0.99153 1.20182 0.92439 0.96765 1.04227 1.19461 0.96014 0.91010 1.05510 1.25538 0.92868 1.12580 0.87980 1.86660 1.74225 1.42203 1.32037 0.92212 0.76224 0.78964 0.81286 1.18809 0.91761 0.84223 1.00817 1.86081 1.35561 1.11952 1.89458 1.22700 0.92583 0.81836 1.06793 1.20556 0.88324 0.85512 0.75932 1.90773 1.16733 1.87439 1.50217 1.45691 1.11562 1.04293 1.74675 1.21394 0.93361 0.82691 1.01758 1.22661 0.98712 0.92233 0.99001 0.87902 1.23109 0.98687 0.94886 1.00361 1.22721 0.86976 0.93393 0.95450 0.90345 1.86418 1.33240 1.79343 1.39045 1.23699 1.03181 0.96563 0.96225 1.21370 0.92036 1.00045 1.04351 1.21422 1.01609 0.90909 1.04049 0.86728 0.91412 0.91542 0.83017 0.92109 0.78022 1.18901 1.22173 0.85946 0.85676 0.74267 0.92364 0.91867 0.91153 0.87693 0.75145 0.88779 0.89914 0.81562 0.82089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.73 10.50 -93.38 -0.98 -1.71 16 3 C 0.09 0.25 6.69 22.49 0.15 0.40 16 4 C -0.12 -0.55 8.59 22.35 0.19 -0.35 16 5 C -0.12 -0.76 5.28 -19.78 -0.10 -0.86 16 6 C -0.08 -0.71 2.33 71.24 0.17 -0.54 16 7 O -0.55 -5.71 12.65 -148.98 -1.89 -7.60 16 8 Si 0.81 4.54 30.17 68.60 2.07 6.61 16 9 C 0.09 0.34 6.61 22.49 0.15 0.49 16 10 O -0.32 -1.61 8.54 -74.31 -0.63 -2.25 16 11 C 0.04 -0.14 5.22 71.24 0.37 0.23 16 12 C 0.51 1.29 7.91 87.66 0.69 1.99 16 13 O -0.57 -8.14 16.50 15.99 0.26 -7.88 16 14 N -0.71 2.84 5.56 -463.06 -2.57 0.27 16 15 C 0.13 -0.23 5.51 86.38 0.48 0.24 16 16 C -0.11 0.53 3.69 -10.27 -0.04 0.49 16 17 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 18 C -0.13 0.42 7.47 31.12 0.23 0.66 16 19 C 0.07 -0.31 5.28 31.12 0.16 -0.15 16 20 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 21 O -0.57 1.20 13.59 -148.98 -2.02 -0.83 16 22 C -0.16 1.02 7.46 31.12 0.23 1.25 16 23 C -0.16 0.33 9.03 22.35 0.20 0.54 16 24 C -0.16 0.28 9.03 22.35 0.20 0.48 16 25 H 0.11 -0.97 8.14 -2.39 -0.02 -0.98 16 26 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 27 H 0.07 -0.53 7.66 -2.38 -0.02 -0.55 16 28 H 0.15 0.27 5.13 -2.91 -0.01 0.26 16 29 H 0.06 0.68 7.83 -2.39 -0.02 0.66 16 30 H 0.37 3.02 8.56 -74.06 -0.63 2.39 16 31 H -0.26 -1.95 7.11 99.48 0.71 -1.24 16 32 H -0.29 -3.50 7.11 99.48 0.71 -2.79 16 33 H 0.12 -1.19 7.65 -2.39 -0.02 -1.21 16 34 H 0.13 -1.25 7.67 -2.39 -0.02 -1.27 16 35 H 0.42 -4.67 8.47 -92.71 -0.79 -5.45 16 36 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.06 0.03 7.84 -2.39 -0.02 0.01 16 38 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 39 H 0.10 -0.50 8.10 -2.39 -0.02 -0.51 16 40 H 0.40 -4.01 9.12 -74.06 -0.68 -4.69 16 41 H 0.09 -0.62 7.89 -2.39 -0.02 -0.64 16 42 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 43 H 0.17 -1.62 6.29 -2.91 -0.02 -1.63 16 44 H 0.16 -1.22 6.29 -2.91 -0.02 -1.24 16 Total: 0.00 -26.07 366.65 -2.56 -28.63 By element: Atomic # 1 Polarization: -20.13 SS G_CDS: -1.00 Total: -21.13 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: 4.20 Total: 5.87 kcal Atomic # 7 Polarization: 2.84 SS G_CDS: -2.57 Total: 0.27 kcal Atomic # 8 Polarization: -15.00 SS G_CDS: -5.26 Total: -20.26 kcal Atomic # 14 Polarization: 4.54 SS G_CDS: 2.07 Total: 6.61 kcal Total: -26.07 -2.56 -28.63 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12857620_4974302.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.854 kcal (2) G-P(sol) polarization free energy of solvation -26.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.922 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.561 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.629 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds