Wall clock time and date at job start Sat Mar 6 2021 20:17:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17398 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47409 * 300.44671 * 3 2 1 5 5 C 1.53006 * 109.46868 * 60.44602 * 3 2 1 6 6 C 1.52999 * 109.46626 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47592 * 300.00035 * 6 5 3 8 8 H 1.09000 * 109.47140 * 300.00346 * 7 6 5 9 9 N 1.46500 * 109.47204 * 180.02562 * 7 6 5 10 10 C 1.34773 * 119.99955 * 85.00142 * 9 7 6 11 11 O 1.21282 * 120.00161 * 359.97438 * 10 9 7 12 12 C 1.50702 * 120.00155 * 180.02562 * 10 9 7 13 13 O 1.42892 * 109.47632 * 179.97438 * 12 10 9 14 14 C 1.35895 * 117.00327 * 179.97438 * 13 12 10 15 15 C 1.38755 * 120.02780 * 179.97438 * 14 13 12 16 16 C 1.50698 * 119.97275 * 359.96337 * 15 14 13 17 17 O 1.42900 * 109.47138 * 284.99359 * 16 15 14 18 18 Si 1.86302 * 109.47241 * 164.99719 * 16 15 14 19 19 C 1.38201 * 120.05401 * 179.97438 * 15 14 13 20 20 C 1.38155 * 120.10755 * 359.97438 * 19 15 14 21 21 C 1.38789 * 120.05777 * 0.02562 * 20 19 15 22 22 O 1.35900 * 120.02934 * 180.02562 * 21 20 19 23 23 C 1.42893 * 116.99696 * 359.97438 * 22 21 20 24 24 C 1.38619 * 119.94494 * 359.74521 * 21 20 19 25 25 C 1.52996 * 109.47165 * 60.00300 * 7 6 5 26 26 C 1.52997 * 109.47101 * 180.44486 * 3 2 1 27 27 H 4.18748 * 15.03933 * 359.97438 * 4 2 1 28 28 H 1.08993 * 109.46955 * 300.00020 * 5 3 2 29 29 H 1.09000 * 109.47050 * 59.99849 * 5 3 2 30 30 H 1.09000 * 109.47160 * 60.00369 * 6 5 3 31 31 H 1.09002 * 109.46719 * 180.02562 * 6 5 3 32 32 H 0.97001 * 119.99882 * 265.00024 * 9 7 6 33 33 H 1.09006 * 109.47112 * 300.00094 * 12 10 9 34 34 H 1.08999 * 109.47140 * 59.99539 * 12 10 9 35 35 H 1.08996 * 109.47316 * 44.99702 * 16 15 14 36 36 H 0.96700 * 114.00494 * 179.97438 * 17 16 15 37 37 H 1.48500 * 109.99942 * 59.99691 * 18 16 15 38 38 H 1.48496 * 110.00348 * 181.31746 * 18 16 15 39 39 H 1.07999 * 119.94246 * 180.02562 * 19 15 14 40 40 H 1.07999 * 119.97061 * 180.02562 * 20 19 15 41 41 H 1.09004 * 109.47155 * 299.99684 * 23 22 21 42 42 H 1.08997 * 109.47635 * 60.00281 * 23 22 21 43 43 H 1.09005 * 109.46948 * 180.02562 * 23 22 21 44 44 H 1.07996 * 120.05511 * 180.25126 * 24 21 20 45 45 H 1.08992 * 109.47534 * 180.02562 * 25 7 6 46 46 H 1.08996 * 109.47134 * 59.99508 * 25 7 6 47 47 H 1.09000 * 109.47140 * 300.00349 * 26 3 2 48 48 H 1.09001 * 109.47230 * 59.99493 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0096 -0.5199 0.8859 5 6 3.1563 -0.7107 -1.2549 6 6 4.6863 -0.7094 -1.2552 7 6 5.1952 0.7334 -1.2442 8 1 4.8312 1.2538 -2.1302 9 7 6.6602 0.7346 -1.2451 10 6 7.3334 0.6424 -2.4090 11 8 6.7265 0.5581 -3.4556 12 6 8.8404 0.6430 -2.4099 13 8 9.3161 0.5360 -3.7530 14 6 10.6632 0.5229 -3.9313 15 6 11.1935 0.4205 -5.2095 16 6 10.2749 0.3231 -6.4001 17 8 9.7102 -0.9882 -6.4600 18 14 11.2406 0.6550 -7.9584 19 6 12.5634 0.4077 -5.3915 20 6 13.4082 0.4972 -4.3019 21 6 12.8827 0.5997 -3.0215 22 8 13.7141 0.6882 -1.9501 23 6 15.1181 0.6692 -2.2154 24 6 11.5090 0.6176 -2.8367 25 6 4.6849 1.4447 0.0106 26 6 3.1553 1.4433 0.0112 27 1 -1.0501 0.0001 0.0007 28 1 2.7934 -1.7384 -1.2628 29 1 2.7927 -0.1901 -2.1408 30 1 5.0502 -1.2297 -0.3692 31 1 5.0498 -1.2157 -2.1494 32 1 7.1456 0.8016 -0.4080 33 1 9.2037 1.5711 -1.9683 34 1 9.2044 -0.2033 -1.8274 35 1 9.4763 1.0586 -6.3040 36 1 9.1067 -1.1231 -7.2034 37 1 12.3326 -0.3412 -8.1010 38 1 10.3396 0.5932 -9.1372 39 1 12.9742 0.3284 -6.3871 40 1 14.4784 0.4873 -4.4467 41 1 15.3811 -0.2638 -2.7139 42 1 15.3780 1.5103 -2.8580 43 1 15.6663 0.7460 -1.2764 44 1 11.0981 0.7014 -1.8414 45 1 5.0471 2.4727 0.0182 46 1 5.0488 0.9243 0.8965 47 1 2.7917 1.9639 -0.8747 48 1 2.7917 1.9501 0.9051 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_4974312.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:17:47 Heat of formation + Delta-G solvation = -59.986792 kcal Electronic energy + Delta-G solvation = -29857.383511 eV Core-core repulsion = 25653.235574 eV Total energy + Delta-G solvation = -4204.147937 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.76730 -41.08497 -40.05282 -39.23770 -38.07947 -36.95611 -35.83989 -33.58383 -32.33169 -31.93351 -31.51161 -30.53790 -28.83424 -28.41775 -25.97578 -24.43159 -23.85623 -23.31625 -22.29767 -21.54588 -21.14948 -19.85566 -19.06687 -18.48081 -18.33516 -17.80022 -17.43013 -17.37600 -16.93114 -16.79053 -16.70271 -16.11803 -15.72898 -15.59501 -15.49930 -15.26777 -15.18581 -15.05948 -14.61114 -14.10622 -13.98838 -13.85740 -13.69325 -13.53645 -13.33539 -13.32760 -13.20819 -12.79739 -12.55800 -12.40755 -12.34493 -12.24743 -11.94825 -11.89310 -11.68915 -11.66221 -11.53975 -10.99117 -10.91796 -10.79672 -10.22969 -10.13445 -9.63529 -9.01744 -4.88575 0.27745 0.39410 1.39988 1.45020 1.53385 1.66660 1.92853 1.96013 2.02238 2.19485 2.57076 2.62200 3.33062 3.48890 3.55970 3.60346 3.65719 3.73417 3.84818 3.94231 4.00038 4.02195 4.04431 4.07064 4.11788 4.15830 4.18408 4.32057 4.33677 4.35045 4.37447 4.40889 4.43437 4.56245 4.61084 4.64401 4.70615 4.91070 4.97288 5.02902 5.08025 5.08441 5.17239 5.22697 5.28559 5.30634 5.36929 5.41860 5.51283 6.15150 6.33663 6.41488 6.68079 6.74350 7.13263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.186 4.186 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.108 4.108 6 C -0.130 4.130 7 C 0.146 3.854 8 H 0.092 0.908 9 N -0.725 5.725 10 C 0.518 3.482 11 O -0.510 6.510 12 C 0.036 3.964 13 O -0.274 6.274 14 C 0.192 3.808 15 C -0.136 4.136 16 C -0.060 4.060 17 O -0.531 6.531 18 Si 0.682 3.318 19 C -0.037 4.037 20 C -0.239 4.239 21 C 0.174 3.826 22 O -0.315 6.315 23 C 0.025 3.975 24 C -0.247 4.247 25 C -0.126 4.126 26 C -0.107 4.107 27 H 0.217 0.783 28 H 0.072 0.928 29 H 0.070 0.930 30 H 0.068 0.932 31 H 0.073 0.927 32 H 0.402 0.598 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.076 0.924 36 H 0.377 0.623 37 H -0.256 1.256 38 H -0.261 1.261 39 H 0.138 0.862 40 H 0.135 0.865 41 H 0.058 0.942 42 H 0.060 0.940 43 H 0.103 0.897 44 H 0.138 0.862 45 H 0.076 0.924 46 H 0.073 0.927 47 H 0.071 0.929 48 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.028 3.094 4.081 5.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.186 4.186 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.146 4.146 6 C -0.169 4.169 7 C 0.042 3.958 8 H 0.110 0.890 9 N -0.379 5.379 10 C 0.302 3.698 11 O -0.383 6.383 12 C -0.043 4.043 13 O -0.185 6.185 14 C 0.145 3.855 15 C -0.137 4.137 16 C -0.170 4.170 17 O -0.338 6.338 18 Si 0.584 3.416 19 C -0.055 4.055 20 C -0.258 4.258 21 C 0.128 3.872 22 O -0.228 6.228 23 C -0.070 4.070 24 C -0.266 4.266 25 C -0.164 4.164 26 C -0.145 4.145 27 H 0.234 0.766 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.087 0.913 31 H 0.092 0.908 32 H 0.236 0.764 33 H 0.114 0.886 34 H 0.113 0.887 35 H 0.094 0.906 36 H 0.224 0.776 37 H -0.181 1.181 38 H -0.186 1.186 39 H 0.155 0.845 40 H 0.153 0.847 41 H 0.077 0.923 42 H 0.078 0.922 43 H 0.121 0.879 44 H 0.156 0.844 45 H 0.094 0.906 46 H 0.092 0.908 47 H 0.090 0.910 48 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 3.025 2.659 3.109 5.088 hybrid contribution -0.594 -0.866 0.485 1.157 sum 2.431 1.793 3.594 4.695 Atomic orbital electron populations 1.24983 0.96013 1.00356 1.00627 1.22988 0.94229 1.00768 1.00656 1.18372 0.84508 0.97209 0.99735 0.88907 1.21515 0.94720 1.01177 0.97179 1.21945 0.95315 0.96478 1.03131 1.21061 0.78308 0.96610 0.99823 0.88975 1.45893 1.07411 1.75981 1.08580 1.20001 0.88671 0.76854 0.84265 1.90783 1.69612 1.46776 1.31128 1.22529 0.92959 1.04109 0.84655 1.86230 1.18402 1.87428 1.26426 1.18384 0.81725 0.92743 0.92651 1.18465 0.93077 1.10674 0.91511 1.24560 1.00480 0.87588 1.04377 1.86605 1.64576 1.30264 1.52359 0.95297 0.80938 0.89847 0.75498 1.20722 0.91317 0.94350 0.99115 1.21100 1.00750 1.12417 0.91505 1.18675 0.89680 0.92702 0.86169 1.86069 1.17878 1.87661 1.31168 1.23144 0.78238 1.01806 1.03772 1.20357 0.91211 1.16008 0.99070 1.21810 0.95983 1.01323 0.97264 1.21489 0.94203 0.95366 1.03431 0.76615 0.90978 0.91084 0.91313 0.90785 0.76380 0.88586 0.88663 0.90597 0.77577 1.18087 1.18649 0.84461 0.84702 0.92304 0.92154 0.87910 0.84377 0.90575 0.90846 0.90995 0.90710 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.24 19.25 29.55 0.57 0.33 16 2 C -0.19 -0.30 12.56 -37.12 -0.47 -0.76 16 3 C 0.02 -0.01 2.57 -93.40 -0.24 -0.25 16 4 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 5 C -0.11 0.02 5.16 -26.73 -0.14 -0.11 16 6 C -0.13 0.06 5.49 -26.73 -0.15 -0.08 16 7 C 0.15 -0.14 2.45 -67.93 -0.17 -0.30 16 8 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 9 N -0.73 1.18 5.08 -53.81 -0.27 0.90 16 10 C 0.52 0.84 7.87 -10.99 -0.09 0.76 16 11 O -0.51 -3.26 16.16 -14.35 -0.23 -3.49 16 12 C 0.04 0.00 5.22 36.01 0.19 0.18 16 13 O -0.27 -1.03 8.99 -39.32 -0.35 -1.38 16 14 C 0.19 0.62 6.66 -39.24 -0.26 0.35 16 15 C -0.14 -0.43 5.31 -104.45 -0.55 -0.98 16 16 C -0.06 -0.16 2.37 36.00 0.09 -0.07 16 17 O -0.53 -2.22 12.86 -35.23 -0.45 -2.67 16 18 Si 0.68 0.33 30.20 -169.99 -5.13 -4.80 16 19 C -0.04 -0.06 8.65 -39.63 -0.34 -0.40 16 20 C -0.24 -0.24 9.04 -39.41 -0.36 -0.60 16 21 C 0.17 0.33 6.68 -39.24 -0.26 0.06 16 22 O -0.31 -0.42 10.49 -19.43 -0.20 -0.62 16 23 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 24 C -0.25 -0.45 8.97 -39.29 -0.35 -0.80 16 25 C -0.13 0.35 5.39 -26.75 -0.14 0.21 16 26 C -0.11 0.17 5.16 -26.75 -0.14 0.03 16 27 H 0.22 -0.37 7.80 -54.09 -0.42 -0.79 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 30 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 31 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 32 H 0.40 -1.92 8.60 -40.82 -0.35 -2.27 16 33 H 0.10 -0.27 7.65 -51.93 -0.40 -0.67 16 34 H 0.10 -0.20 7.67 -51.93 -0.40 -0.60 16 35 H 0.08 0.19 7.82 -51.93 -0.41 -0.21 16 36 H 0.38 0.17 8.74 45.56 0.40 0.56 16 37 H -0.26 -0.68 6.75 56.52 0.38 -0.30 16 38 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 39 H 0.14 0.00 4.89 -52.49 -0.26 -0.26 16 40 H 0.14 -0.18 6.29 -52.49 -0.33 -0.51 16 41 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 42 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 43 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 44 H 0.14 -0.05 6.30 -52.49 -0.33 -0.38 16 45 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 46 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 47 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 48 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 396.32 15.07 5.97 5.97 Total: 0.00 -10.46 396.32 -9.63 -20.08 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -7.13 Total: -12.48 kcal Atomic # 6 Polarization: 0.31 SS G_CDS: -1.82 Total: -1.51 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -0.27 Total: 0.90 kcal Atomic # 8 Polarization: -6.92 SS G_CDS: -1.24 Total: -8.16 kcal Atomic # 14 Polarization: 0.33 SS G_CDS: -5.13 Total: -4.80 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -10.46 -9.63 -20.08 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_4974312.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.904 kcal (2) G-P(sol) polarization free energy of solvation -10.457 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.083 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds