Wall clock time and date at job start Sat Mar 6 2021 20:17:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 H 1.09003 * 109.47064 * 262.73626 * 3 2 1 5 5 C 1.53002 * 109.47255 * 22.73934 * 3 2 1 6 6 C 1.53000 * 109.47040 * 179.97438 * 5 3 2 7 7 C 1.53000 * 109.47244 * 300.00074 * 6 5 3 8 8 H 1.08997 * 109.47393 * 300.00066 * 7 6 5 9 9 N 1.46497 * 109.47203 * 179.97438 * 7 6 5 10 10 C 1.34782 * 120.00257 * 155.00095 * 9 7 6 11 11 O 1.21287 * 119.99282 * 359.97438 * 10 9 7 12 12 C 1.50692 * 120.00156 * 180.02562 * 10 9 7 13 13 O 1.42905 * 109.47280 * 179.97438 * 12 10 9 14 14 C 1.35990 * 117.00366 * 179.97438 * 13 12 10 15 15 C 1.39152 * 120.07342 * 179.97438 * 14 13 12 16 16 O 1.35992 * 120.07406 * 0.02562 * 15 14 13 17 17 C 1.42904 * 116.99956 * 179.97438 * 16 15 14 18 18 C 1.38570 * 119.85311 * 179.97438 * 15 14 13 19 19 C 1.38245 * 119.99723 * 0.02562 * 18 15 14 20 20 C 1.50700 * 119.92334 * 179.97438 * 19 18 15 21 21 O 1.42903 * 109.46801 * 65.00179 * 20 19 18 22 22 Si 1.86295 * 109.47088 * 184.99848 * 20 19 18 23 23 C 1.38250 * 120.14567 * 0.02562 * 19 18 15 24 24 C 1.38233 * 120.14989 * 359.95995 * 23 19 18 25 25 C 1.53002 * 109.47163 * 60.00000 * 7 6 5 26 26 C 1.53000 * 109.47040 * 300.00124 * 25 7 6 27 27 H 4.18738 * 15.03999 * 359.97438 * 4 2 1 28 28 H 1.08997 * 109.46913 * 59.99991 * 5 3 2 29 29 H 1.08992 * 109.46815 * 300.00018 * 5 3 2 30 30 H 1.08993 * 109.47092 * 179.97438 * 6 5 3 31 31 H 1.09003 * 109.46875 * 59.99940 * 6 5 3 32 32 H 0.96996 * 120.00182 * 335.00189 * 9 7 6 33 33 H 1.08993 * 109.47541 * 59.99513 * 12 10 9 34 34 H 1.09003 * 109.47206 * 299.99535 * 12 10 9 35 35 H 1.09004 * 109.46727 * 180.02562 * 17 16 15 36 36 H 1.09001 * 109.46790 * 299.99120 * 17 16 15 37 37 H 1.08998 * 109.47193 * 59.99618 * 17 16 15 38 38 H 1.07995 * 120.00074 * 180.29922 * 18 15 14 39 39 H 1.08995 * 109.47556 * 305.00099 * 20 19 18 40 40 H 0.96706 * 114.00056 * 60.00125 * 21 20 19 41 41 H 1.48507 * 109.99947 * 58.68345 * 22 20 19 42 42 H 1.48497 * 110.00119 * 180.02562 * 22 20 19 43 43 H 1.08007 * 119.92329 * 179.97438 * 23 19 18 44 44 H 1.08000 * 120.00165 * 180.02562 * 24 23 19 45 45 H 1.08997 * 109.46913 * 59.99772 * 25 7 6 46 46 H 1.09000 * 109.47333 * 180.02562 * 25 7 6 47 47 H 1.09011 * 109.47068 * 299.99806 * 26 25 7 48 48 H 1.09003 * 109.46920 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 1 3.0093 0.1308 1.0194 5 6 3.1566 -1.3295 -0.5576 6 6 4.6866 -1.3285 -0.5582 7 6 5.1956 -0.1802 -1.4319 8 1 4.8320 -0.3104 -2.4511 9 7 6.6606 -0.1789 -1.4319 10 6 7.3340 0.3647 -2.4651 11 8 6.7270 0.8523 -3.3951 12 6 8.8409 0.3655 -2.4654 13 8 9.3167 0.9923 -3.6583 14 6 10.6648 1.0764 -3.8161 15 6 11.1977 1.6738 -4.9542 16 8 10.3716 2.1754 -5.9110 17 6 10.9889 2.7750 -7.0518 18 6 12.5721 1.7575 -5.1101 19 6 13.4105 1.2476 -4.1363 20 6 14.9049 1.3390 -4.3078 21 8 15.3027 2.7115 -4.2949 22 14 15.7464 0.4354 -2.9129 23 6 12.8809 0.6531 -3.0061 24 6 11.5108 0.5666 -2.8443 25 6 4.6850 1.1499 -0.8743 26 6 3.1550 1.1489 -0.8737 27 1 -1.0500 0.0005 -0.0002 28 1 2.7934 -1.4595 -1.5770 29 1 2.7937 -2.1475 0.0646 30 1 5.0504 -2.2762 -0.9549 31 1 5.0502 -1.1982 0.4611 32 1 7.1459 -0.5693 -0.6884 33 1 9.2049 -0.6611 -2.4248 34 1 9.2042 0.9143 -1.5965 35 1 10.2189 3.1336 -7.7350 36 1 11.6084 3.6127 -6.7314 37 1 11.6100 2.0367 -7.5589 38 1 12.9883 2.2251 -5.9902 39 1 15.1900 0.8871 -5.2578 40 1 15.0802 3.1778 -3.4774 41 1 15.3164 -0.9860 -2.8959 42 1 17.2207 0.5186 -3.0701 43 1 13.5392 0.2555 -2.2478 44 1 11.0997 0.1020 -1.9602 45 1 5.0486 1.2801 0.1450 46 1 5.0472 1.9680 -1.4969 47 1 2.7913 1.0187 -1.8931 48 1 2.7912 2.0968 -0.4769 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12865462_60476.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 20:17:54 Heat of formation + Delta-G solvation = -61.093727 kcal Electronic energy + Delta-G solvation = -29524.262126 eV Core-core repulsion = 25320.066189 eV Total energy + Delta-G solvation = -4204.195937 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.79900 -41.09590 -39.77304 -38.99997 -38.76820 -36.92763 -35.84314 -33.58897 -32.06583 -31.93323 -31.48805 -30.65963 -28.92118 -28.36851 -26.21016 -24.34240 -23.85793 -23.34440 -22.49567 -21.56497 -21.15942 -19.76126 -19.06802 -18.61174 -18.31757 -17.91484 -17.50974 -17.23288 -17.04188 -16.60660 -16.12537 -16.09504 -15.84735 -15.70402 -15.65117 -15.45328 -15.22952 -15.06186 -14.67995 -14.27030 -14.11014 -13.97338 -13.72444 -13.63343 -13.46700 -13.33147 -12.79449 -12.63581 -12.51985 -12.35084 -12.25181 -12.18684 -12.11227 -11.98416 -11.92843 -11.76133 -11.67941 -10.99330 -10.92035 -10.79659 -10.47060 -10.13752 -9.79212 -8.85127 -5.07128 0.17365 0.29613 1.25934 1.45150 1.53237 1.60605 1.92654 1.94422 1.95827 2.32115 2.53384 2.56975 3.32425 3.41596 3.46834 3.57306 3.64033 3.65268 3.76990 3.79878 3.91412 3.93670 4.01872 4.06588 4.12197 4.15475 4.25592 4.29245 4.31989 4.33876 4.34652 4.37044 4.48461 4.56472 4.60654 4.64010 4.65369 4.90691 4.96909 4.99621 5.02555 5.08165 5.09511 5.17032 5.22402 5.30430 5.36760 5.41084 5.55419 5.97038 6.35253 6.53941 6.55328 6.74187 7.13797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.187 4.187 3 C 0.020 3.980 4 H 0.093 0.907 5 C -0.107 4.107 6 C -0.126 4.126 7 C 0.145 3.855 8 H 0.092 0.908 9 N -0.725 5.725 10 C 0.516 3.484 11 O -0.508 6.508 12 C 0.038 3.962 13 O -0.277 6.277 14 C 0.104 3.896 15 C 0.107 3.893 16 O -0.301 6.301 17 C 0.025 3.975 18 C -0.146 4.146 19 C -0.116 4.116 20 C -0.066 4.066 21 O -0.540 6.540 22 Si 0.689 3.311 23 C -0.112 4.112 24 C -0.170 4.170 25 C -0.130 4.130 26 C -0.108 4.108 27 H 0.217 0.783 28 H 0.071 0.929 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.073 0.927 32 H 0.401 0.599 33 H 0.094 0.906 34 H 0.095 0.905 35 H 0.103 0.897 36 H 0.057 0.943 37 H 0.055 0.945 38 H 0.140 0.860 39 H 0.113 0.887 40 H 0.379 0.621 41 H -0.257 1.257 42 H -0.255 1.255 43 H 0.132 0.868 44 H 0.140 0.860 45 H 0.068 0.932 46 H 0.074 0.926 47 H 0.071 0.929 48 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.266 -1.657 6.089 6.437 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.187 4.187 3 C 0.002 3.998 4 H 0.111 0.889 5 C -0.145 4.145 6 C -0.163 4.163 7 C 0.041 3.959 8 H 0.110 0.890 9 N -0.379 5.379 10 C 0.300 3.700 11 O -0.381 6.381 12 C -0.041 4.041 13 O -0.189 6.189 14 C 0.059 3.941 15 C 0.061 3.939 16 O -0.214 6.214 17 C -0.070 4.070 18 C -0.165 4.165 19 C -0.116 4.116 20 C -0.177 4.177 21 O -0.346 6.346 22 Si 0.590 3.410 23 C -0.130 4.130 24 C -0.188 4.188 25 C -0.168 4.168 26 C -0.146 4.146 27 H 0.234 0.766 28 H 0.090 0.910 29 H 0.093 0.907 30 H 0.094 0.906 31 H 0.092 0.908 32 H 0.236 0.764 33 H 0.111 0.889 34 H 0.113 0.887 35 H 0.121 0.879 36 H 0.076 0.924 37 H 0.074 0.926 38 H 0.158 0.842 39 H 0.130 0.870 40 H 0.227 0.773 41 H -0.182 1.182 42 H -0.180 1.180 43 H 0.150 0.850 44 H 0.157 0.843 45 H 0.087 0.913 46 H 0.092 0.908 47 H 0.089 0.911 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 1.229 -2.031 4.857 5.406 hybrid contribution 0.028 -0.251 -0.133 0.285 sum 1.257 -2.282 4.725 5.395 Atomic orbital electron populations 1.24984 0.96017 1.00252 1.00718 1.22991 0.94236 1.00805 1.00631 1.18371 0.84501 0.96113 1.00810 0.88903 1.21497 0.94197 0.96445 1.02374 1.21815 0.95987 0.98210 1.00338 1.21065 0.78328 0.95157 1.01302 0.88977 1.45892 1.07394 1.61730 1.22890 1.20024 0.88728 0.78573 0.82645 1.90802 1.69593 1.43191 1.34504 1.22491 0.92994 0.99757 0.88839 1.86281 1.18030 1.75188 1.39400 1.18279 0.82685 0.99545 0.93638 1.18286 0.88962 0.97708 0.88947 1.86251 1.33587 1.72234 1.29376 1.23133 1.00050 0.97273 0.86568 1.20940 0.90459 1.03713 1.01389 1.20035 0.96089 1.00573 0.94939 1.25036 0.93139 0.89365 1.10140 1.86505 1.82667 1.21761 1.43642 0.94751 0.79695 0.80720 0.85788 1.20660 0.94470 1.00667 0.97217 1.20991 0.93665 1.04667 0.99509 1.21943 0.95310 0.97749 1.01829 1.21520 0.94740 0.97912 1.00456 0.76620 0.90995 0.90720 0.90616 0.90850 0.76424 0.88851 0.88739 0.87865 0.92429 0.92625 0.84231 0.86984 0.77324 1.18188 1.17979 0.85039 0.84270 0.91302 0.90767 0.91074 0.90963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.20 -0.22 19.25 29.55 0.57 0.35 16 2 C -0.19 -0.27 12.56 -37.12 -0.47 -0.74 16 3 C 0.02 -0.01 2.57 -93.41 -0.24 -0.25 16 4 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 5 C -0.11 0.18 5.16 -26.73 -0.14 0.04 16 6 C -0.13 0.38 5.39 -26.73 -0.14 0.24 16 7 C 0.15 -0.17 2.46 -67.93 -0.17 -0.33 16 8 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 9 N -0.73 1.46 5.08 -53.81 -0.27 1.19 16 10 C 0.52 0.73 7.87 -10.99 -0.09 0.64 16 11 O -0.51 -3.40 16.16 -14.36 -0.23 -3.63 16 12 C 0.04 -0.03 5.22 36.00 0.19 0.16 16 13 O -0.28 -1.05 9.45 -47.33 -0.45 -1.50 16 14 C 0.10 0.27 6.70 -39.12 -0.26 0.01 16 15 C 0.11 0.36 6.70 -39.12 -0.26 0.10 16 16 O -0.30 -1.33 10.28 -34.22 -0.35 -1.69 16 17 C 0.02 0.01 9.81 101.05 0.99 1.00 16 18 C -0.15 -0.23 8.67 -39.46 -0.34 -0.57 16 19 C -0.12 -0.04 5.35 -104.62 -0.56 -0.60 16 20 C -0.07 0.02 2.80 36.01 0.10 0.13 16 21 O -0.54 -0.04 12.83 -35.23 -0.45 -0.49 16 22 Si 0.69 -1.01 29.79 -169.99 -5.06 -6.07 16 23 C -0.11 0.09 8.66 -39.58 -0.34 -0.25 16 24 C -0.17 0.08 9.04 -39.46 -0.36 -0.28 16 25 C -0.13 0.11 5.49 -26.73 -0.15 -0.04 16 26 C -0.11 0.05 5.16 -26.73 -0.14 -0.09 16 27 H 0.22 -0.39 7.80 -54.09 -0.42 -0.81 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 -0.31 8.14 -51.93 -0.42 -0.73 16 32 H 0.40 -2.17 8.60 -40.82 -0.35 -2.52 16 33 H 0.09 -0.33 7.66 -51.93 -0.40 -0.73 16 34 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 35 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 36 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 37 H 0.06 -0.04 7.67 -51.93 -0.40 -0.43 16 38 H 0.14 0.09 6.30 -52.49 -0.33 -0.25 16 39 H 0.11 0.01 7.96 -51.93 -0.41 -0.41 16 40 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 41 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 42 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 43 H 0.13 -0.43 4.89 -52.48 -0.26 -0.68 16 44 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 45 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 46 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 47 H 0.07 0.04 8.14 -51.92 -0.42 -0.38 16 48 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 396.88 15.07 5.98 5.98 Total: 0.00 -11.25 396.88 -9.76 -21.01 By element: Atomic # 1 Polarization: -7.19 SS G_CDS: -7.12 Total: -14.31 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -1.80 Total: -0.49 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -0.27 Total: 1.19 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -1.48 Total: -7.31 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.06 Total: -6.07 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -11.25 -9.76 -21.01 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12865462_60476.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.083 kcal (2) G-P(sol) polarization free energy of solvation -11.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.011 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds