Wall clock time and date at job start Sat Mar 6 2021 23:41:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47286 * 2 1 4 4 C 1.50708 * 109.47066 * 240.00088 * 2 1 3 5 5 C 1.35449 * 126.06599 * 120.02390 * 4 2 1 6 6 N 1.35539 * 108.86640 * 180.22648 * 5 4 2 7 7 C 1.37643 * 108.64469 * 359.63126 * 6 5 4 8 8 C 1.46684 * 126.23078 * 180.17715 * 7 6 5 9 9 O 1.21696 * 119.99518 * 180.22550 * 8 7 6 10 10 N 1.34768 * 119.99905 * 0.22186 * 8 7 6 11 11 C 1.46502 * 119.99913 * 175.34504 * 10 8 7 12 12 C 1.50700 * 112.84951 * 294.39983 * 11 10 8 13 13 C 1.38241 * 119.99060 * 161.80129 * 12 11 10 14 14 C 1.38215 * 120.01075 * 179.76931 * 13 12 11 15 15 C 1.38326 * 119.98988 * 0.50398 * 14 13 12 16 16 Br 1.89103 * 120.01092 * 179.77091 * 15 14 13 17 17 C 1.38333 * 119.97875 * 359.74819 * 15 14 13 18 18 C 1.38214 * 119.98857 * 359.97438 * 17 15 14 19 19 C 1.53776 * 113.61536 * 163.20033 * 11 10 8 20 20 C 1.54053 * 86.98896 * 270.83927 * 19 11 10 21 21 H 1.08998 * 113.62199 * 220.02658 * 20 19 11 22 22 O 1.42898 * 113.61151 * 89.11433 * 20 19 11 23 23 C 1.53786 * 113.61501 * 65.59180 * 11 10 8 24 24 C 1.37876 * 107.53715 * 0.36512 * 7 6 5 25 25 H 0.96696 * 113.99792 * 300.00276 * 1 2 3 26 26 H 1.09000 * 109.47271 * 119.99817 * 2 1 3 27 27 H 1.48503 * 110.00063 * 178.68372 * 3 2 1 28 28 H 1.48506 * 110.00007 * 300.00046 * 3 2 1 29 29 H 1.08006 * 125.56778 * 359.96430 * 5 4 2 30 30 H 0.97002 * 125.67008 * 179.76685 * 6 5 4 31 31 H 0.96995 * 120.00373 * 355.34494 * 10 8 7 32 32 H 1.08003 * 119.99483 * 0.02562 * 13 12 11 33 33 H 1.08006 * 120.00976 * 180.23353 * 14 13 12 34 34 H 1.07994 * 120.00705 * 179.97438 * 17 15 14 35 35 H 1.07999 * 119.99775 * 180.02562 * 18 17 15 36 36 H 1.08998 * 113.61893 * 25.43672 * 19 11 10 37 37 H 1.09009 * 113.61204 * 156.33624 * 19 11 10 38 38 H 0.96701 * 113.99811 * 82.51254 * 22 20 19 39 39 H 1.08997 * 113.61607 * 203.66670 * 23 11 10 40 40 H 1.09000 * 113.61510 * 334.48824 * 23 11 10 41 41 H 1.07993 * 126.45958 * 179.80173 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7136 -0.1740 -2.1975 6 7 2.9520 -1.1169 -3.1416 7 6 2.3186 -2.2812 -2.7705 8 6 2.3260 -3.5466 -3.5124 9 8 1.7205 -4.5093 -3.0793 10 7 3.0032 -3.6429 -4.6736 11 6 3.0958 -4.9324 -5.3627 12 6 3.8793 -5.9573 -4.5837 13 6 3.7530 -7.3001 -4.8867 14 6 4.4750 -8.2401 -4.1756 15 6 5.3161 -7.8378 -3.1539 16 35 6.2993 -9.1238 -2.1764 17 6 5.4383 -6.4943 -2.8477 18 6 4.7202 -5.5546 -3.5630 19 6 3.5274 -4.8150 -6.8340 20 6 2.0318 -4.6787 -7.1773 21 1 1.7401 -5.2156 -8.0798 22 8 1.5601 -3.3300 -7.1554 23 6 1.7443 -5.4530 -5.8800 24 6 1.6724 -2.0403 -1.5766 25 1 -0.3933 0.4417 0.7650 26 1 1.7923 -0.5138 0.8900 27 1 3.5346 1.7702 0.0321 28 1 1.5615 2.4679 -1.2085 29 1 3.0833 0.8406 -2.2155 30 1 3.4825 -0.9923 -3.9441 31 1 3.4293 -2.8585 -5.0531 32 1 3.0931 -7.6145 -5.6818 33 1 4.3791 -9.2890 -4.4148 34 1 6.0945 -6.1797 -2.0498 35 1 4.8158 -4.5057 -3.3243 36 1 4.1094 -3.9186 -7.0482 37 1 3.9850 -5.7223 -7.2286 38 1 1.7379 -2.8379 -7.9686 39 1 1.7153 -6.5342 -6.0141 40 1 0.8879 -5.0723 -5.3234 41 1 1.0787 -2.7458 -1.0145 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_10543058.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:18 Heat of formation + Delta-G solvation = 7.938636 kcal Electronic energy + Delta-G solvation = -28395.061183 eV Core-core repulsion = 24290.146089 eV Total energy + Delta-G solvation = -4104.915094 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.041 amu Computer time = 1.91 seconds Orbital eigenvalues (eV) -42.62406 -41.91290 -39.69221 -39.21188 -37.56311 -36.40418 -34.28050 -33.13986 -32.60530 -31.97456 -30.72655 -30.21568 -27.18300 -26.70626 -25.67339 -24.16173 -23.67615 -22.43643 -21.24006 -20.77881 -20.30546 -19.71372 -18.77028 -18.25158 -17.96079 -17.21868 -17.02741 -16.44447 -16.20978 -15.95006 -15.74611 -15.46527 -15.24408 -15.06549 -14.78411 -14.66944 -14.58879 -14.35881 -14.22646 -14.01238 -13.77884 -13.51620 -13.31978 -13.06262 -12.74610 -12.45090 -12.42250 -12.24622 -11.92251 -11.72283 -11.52864 -11.20088 -11.14921 -10.96387 -10.30684 -10.18676 -10.03277 -9.84731 -9.52603 -9.28217 -4.99570 0.03241 0.29913 0.43204 0.69508 1.30983 1.50075 1.69170 1.87351 1.95733 2.00419 2.40845 2.50356 2.88247 3.24357 3.38399 3.50186 3.55191 3.60588 3.71621 3.86190 3.87283 3.90490 4.08784 4.14630 4.27513 4.32018 4.37384 4.43861 4.50040 4.59267 4.65971 4.70087 4.77378 4.89832 4.91800 4.99108 5.09139 5.15826 5.19785 5.27635 5.55502 5.62040 5.75601 5.81013 6.19589 6.43044 6.48907 6.77094 7.17659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.036 4.036 3 Si 0.686 3.314 4 C -0.164 4.164 5 C 0.026 3.974 6 N -0.533 5.533 7 C -0.055 4.055 8 C 0.596 3.404 9 O -0.510 6.510 10 N -0.704 5.704 11 C 0.198 3.802 12 C -0.057 4.057 13 C -0.106 4.106 14 C -0.086 4.086 15 C -0.091 4.091 16 Br -0.050 7.050 17 C -0.086 4.086 18 C -0.098 4.098 19 C -0.162 4.162 20 C 0.080 3.920 21 H 0.077 0.923 22 O -0.545 6.545 23 C -0.131 4.131 24 C -0.072 4.072 25 H 0.380 0.620 26 H 0.071 0.929 27 H -0.257 1.257 28 H -0.253 1.253 29 H 0.166 0.834 30 H 0.418 0.582 31 H 0.397 0.603 32 H 0.134 0.866 33 H 0.135 0.865 34 H 0.132 0.868 35 H 0.123 0.877 36 H 0.082 0.918 37 H 0.109 0.891 38 H 0.381 0.619 39 H 0.108 0.892 40 H 0.093 0.907 41 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.306 4.592 -2.907 5.904 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.148 4.148 3 Si 0.587 3.413 4 C -0.171 4.171 5 C -0.110 4.110 6 N -0.130 5.130 7 C -0.167 4.167 8 C 0.383 3.617 9 O -0.384 6.384 10 N -0.355 5.355 11 C 0.111 3.889 12 C -0.059 4.059 13 C -0.125 4.125 14 C -0.106 4.106 15 C -0.170 4.170 16 Br 0.036 6.964 17 C -0.106 4.106 18 C -0.117 4.117 19 C -0.200 4.200 20 C 0.020 3.980 21 H 0.095 0.905 22 O -0.350 6.350 23 C -0.169 4.169 24 C -0.098 4.098 25 H 0.227 0.773 26 H 0.089 0.911 27 H -0.182 1.182 28 H -0.178 1.178 29 H 0.183 0.817 30 H 0.255 0.745 31 H 0.232 0.768 32 H 0.152 0.848 33 H 0.153 0.847 34 H 0.150 0.850 35 H 0.141 0.859 36 H 0.101 0.899 37 H 0.127 0.873 38 H 0.228 0.772 39 H 0.126 0.874 40 H 0.111 0.889 41 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 2.705 3.476 -2.755 5.195 hybrid contribution 0.605 0.494 -1.410 1.612 sum 3.310 3.969 -4.165 6.638 Atomic orbital electron populations 1.86518 1.17566 1.81737 1.49399 1.23977 0.85270 1.09234 0.96304 0.95126 0.80529 0.77995 0.87679 1.18798 1.05035 0.95035 0.98206 1.21635 1.04024 0.94548 0.90842 1.41845 1.41121 1.09724 1.20272 1.20418 1.08528 0.87355 1.00388 1.16937 0.78663 0.86218 0.79854 1.90889 1.42326 1.37237 1.67991 1.45346 1.56158 1.10468 1.23529 1.19835 0.96047 0.82716 0.90276 1.19869 0.96040 0.93902 0.96066 1.20935 0.99481 0.91644 1.00440 1.21100 0.94937 1.00411 0.94135 1.21840 1.01671 0.93688 0.99802 1.96771 1.72151 1.54542 1.72939 1.21098 0.99090 0.91037 0.99389 1.20879 0.96127 0.99484 0.95226 1.24098 0.98494 1.04249 0.93145 1.22780 0.92454 0.84150 0.98570 0.90525 1.86536 1.82017 1.23633 1.42850 1.23539 0.97953 1.00330 0.95082 1.21183 0.98945 0.95569 0.94089 0.77321 0.91123 1.18197 1.17766 0.81660 0.74467 0.76848 0.84820 0.84672 0.85018 0.85914 0.89940 0.87308 0.77201 0.87358 0.88879 0.83030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.68 12.86 -35.23 -0.45 -1.13 16 2 C -0.04 -0.02 3.01 36.01 0.11 0.09 16 3 Si 0.69 -0.97 30.59 -169.99 -5.20 -6.17 16 4 C -0.16 -0.44 5.47 -105.02 -0.57 -1.02 16 5 C 0.03 0.02 10.45 -16.91 -0.18 -0.15 16 6 N -0.53 0.13 5.99 -9.39 -0.06 0.07 16 7 C -0.05 -0.15 7.05 -81.98 -0.58 -0.73 16 8 C 0.60 1.98 6.36 -12.85 -0.08 1.89 16 9 O -0.51 -3.56 15.43 5.19 0.08 -3.48 16 10 N -0.70 0.02 3.79 -49.21 -0.19 -0.17 16 11 C 0.20 -0.03 0.92 -132.16 -0.12 -0.15 16 12 C -0.06 -0.07 4.68 -104.62 -0.49 -0.55 16 13 C -0.11 -0.06 8.97 -39.59 -0.36 -0.41 16 14 C -0.09 -0.11 9.79 -39.56 -0.39 -0.50 16 15 C -0.09 -0.21 6.22 -39.51 -0.25 -0.46 16 16 Br -0.05 -0.11 33.70 -68.01 -2.29 -2.40 16 17 C -0.09 -0.19 9.79 -39.56 -0.39 -0.57 16 18 C -0.10 -0.18 8.92 -39.59 -0.35 -0.54 16 19 C -0.16 0.45 7.15 -25.78 -0.18 0.27 16 20 C 0.08 -0.15 5.28 -25.77 -0.14 -0.29 16 21 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 22 O -0.55 0.60 13.09 -35.23 -0.46 0.14 16 23 C -0.13 -0.05 6.58 -25.91 -0.17 -0.22 16 24 C -0.07 -0.30 10.59 -39.12 -0.41 -0.71 16 25 H 0.38 -1.50 8.74 45.56 0.40 -1.10 16 26 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 27 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 28 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 29 H 0.17 -0.16 6.19 -52.48 -0.32 -0.49 16 30 H 0.42 -1.57 8.20 -40.82 -0.33 -1.90 16 31 H 0.40 -1.01 7.80 -40.82 -0.32 -1.33 16 32 H 0.13 -0.24 6.26 -52.48 -0.33 -0.57 16 33 H 0.14 -0.03 8.06 -52.48 -0.42 -0.46 16 34 H 0.13 0.14 8.06 -52.49 -0.42 -0.28 16 35 H 0.12 0.14 6.91 -52.49 -0.36 -0.22 16 36 H 0.08 -0.31 8.09 -51.93 -0.42 -0.73 16 37 H 0.11 -0.40 7.95 -51.92 -0.41 -0.81 16 38 H 0.38 -1.96 9.12 45.56 0.42 -1.55 16 39 H 0.11 -0.13 6.00 -51.93 -0.31 -0.44 16 40 H 0.09 0.35 7.23 -51.93 -0.38 -0.03 16 41 H 0.15 0.72 8.06 -52.49 -0.42 0.29 16 LS Contribution 363.67 15.07 5.48 5.48 Total: 0.00 -10.90 363.67 -11.31 -22.21 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -3.68 Total: -10.49 kcal Atomic # 6 Polarization: 0.50 SS G_CDS: -4.55 Total: -4.04 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -0.24 Total: -0.10 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.83 Total: -4.48 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.20 Total: -6.17 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.29 Total: -2.40 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -10.90 -11.31 -22.21 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_10543058.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.146 kcal (2) G-P(sol) polarization free energy of solvation -10.896 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.312 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.208 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.939 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.91 seconds