Wall clock time and date at job start Sat Mar 6 2021 23:41:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.35448 * 125.56075 * 2 1 4 4 C 1.50699 * 126.07223 * 359.97438 * 3 2 1 5 5 O 1.42894 * 109.47369 * 230.34156 * 4 3 2 6 6 Si 1.86302 * 109.47055 * 110.33880 * 4 3 2 7 7 C 1.39839 * 107.86233 * 179.71974 * 3 2 1 8 8 C 1.50696 * 126.45852 * 180.26466 * 7 3 2 9 9 C 1.37871 * 107.08483 * 0.42308 * 7 3 2 10 10 C 1.46680 * 126.23348 * 179.84628 * 9 7 3 11 11 O 1.21698 * 119.99732 * 359.71119 * 10 9 7 12 12 N 1.34773 * 120.00153 * 179.71398 * 10 9 7 13 13 C 1.46501 * 120.00229 * 184.23530 * 12 10 9 14 14 C 1.50698 * 112.84880 * 294.60525 * 13 12 10 15 15 C 1.38241 * 119.98807 * 156.58611 * 14 13 12 16 16 C 1.38212 * 120.01094 * 180.02562 * 15 14 13 17 17 C 1.38327 * 119.99063 * 359.97438 * 16 15 14 18 18 Br 1.89100 * 120.01327 * 179.97438 * 17 16 15 19 19 C 1.38323 * 119.97976 * 0.02562 * 17 16 15 20 20 C 1.38225 * 119.98777 * 359.97438 * 19 17 16 21 21 C 1.53786 * 113.61250 * 163.40845 * 13 12 10 22 22 C 1.53780 * 87.08142 * 270.80272 * 21 13 12 23 23 H 1.09003 * 113.61062 * 220.02506 * 22 21 13 24 24 O 1.42896 * 113.61655 * 89.20211 * 22 21 13 25 25 C 1.53778 * 113.68615 * 65.87686 * 13 12 10 26 26 N 1.35526 * 125.56558 * 179.97438 * 2 1 3 27 27 H 1.09002 * 109.46648 * 268.91624 * 1 2 3 28 28 H 1.08996 * 109.47144 * 28.91426 * 1 2 3 29 29 H 1.08997 * 109.46862 * 148.92116 * 1 2 3 30 30 H 1.09001 * 109.46988 * 350.34264 * 4 3 2 31 31 H 0.96702 * 113.99960 * 179.97438 * 5 4 3 32 32 H 1.48495 * 110.00298 * 306.54009 * 6 4 3 33 33 H 1.48503 * 109.99922 * 67.86325 * 6 4 3 34 34 H 1.09001 * 109.47485 * 270.21075 * 8 7 3 35 35 H 1.09005 * 109.47406 * 30.21082 * 8 7 3 36 36 H 1.09003 * 109.47253 * 150.21400 * 8 7 3 37 37 H 0.97004 * 119.99829 * 4.23934 * 12 10 9 38 38 H 1.07999 * 119.99521 * 359.97438 * 15 14 13 39 39 H 1.08000 * 120.00773 * 180.25624 * 16 15 14 40 40 H 1.08001 * 120.00950 * 180.02562 * 19 17 16 41 41 H 1.07998 * 119.99212 * 180.02562 * 20 19 17 42 42 H 1.09003 * 113.61591 * 25.35036 * 21 13 12 43 43 H 1.09000 * 113.61032 * 156.25486 * 21 13 12 44 44 H 0.96700 * 114.00362 * 179.97438 * 24 22 21 45 45 H 1.09008 * 113.61134 * 203.67395 * 25 13 12 46 46 H 1.08999 * 113.61926 * 334.57576 * 25 13 12 47 47 H 0.97005 * 125.68091 * 0.04157 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8199 2.5321 -0.0005 5 8 2.4862 3.2548 -1.0376 6 14 2.2031 3.3142 1.6464 7 6 3.6270 0.6768 0.0065 8 6 4.8485 1.5592 0.0145 9 6 3.6123 -0.7019 0.0006 10 6 4.7861 -1.5814 0.0011 11 8 5.9050 -1.1029 0.0018 12 7 4.6255 -2.9196 0.0007 13 6 5.7943 -3.7977 0.0948 14 6 6.7004 -3.6965 -1.1050 15 6 8.0330 -4.0479 -0.9962 16 6 8.8646 -3.9547 -2.0962 17 6 8.3631 -3.5103 -3.3064 18 35 9.5005 -3.3819 -4.8117 19 6 7.0297 -3.1588 -3.4149 20 6 6.1989 -3.2523 -2.3142 21 6 5.4481 -5.2444 0.4851 22 6 5.5985 -4.8019 1.9502 23 1 6.0960 -5.5394 2.5801 24 8 4.3880 -4.3066 2.5257 25 6 6.5366 -3.6963 1.4378 26 7 2.2953 -1.1024 0.0005 27 1 -0.3633 -0.0194 1.0275 28 1 -0.3633 0.8995 -0.4969 29 1 -0.3633 -0.8801 -0.5305 30 1 0.7440 2.5576 -0.1733 31 1 2.2284 4.1850 -1.0970 32 1 1.6478 2.4834 2.7447 33 1 3.6719 3.4580 1.8109 34 1 5.1464 1.7767 -1.0113 35 1 4.6203 2.4911 0.5318 36 1 5.6626 1.0482 0.5286 37 1 3.7359 -3.3012 -0.0620 38 1 8.4245 -4.3945 -0.0512 39 1 9.9046 -4.2332 -2.0122 40 1 6.6376 -2.8121 -4.3596 41 1 5.1577 -2.9782 -2.3989 42 1 4.4323 -5.5371 0.2195 43 1 6.1956 -5.9724 0.1699 44 1 4.4762 -4.0270 3.4473 45 1 7.5818 -4.0012 1.3831 46 1 6.3996 -2.7394 1.9413 47 1 1.9835 -2.0210 0.0003 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12297754.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:34 Heat of formation + Delta-G solvation = -5.890386 kcal Electronic energy + Delta-G solvation = -33211.685291 eV Core-core repulsion = 28795.095288 eV Total energy + Delta-G solvation = -4416.590003 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 421.072 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.85287 -42.00231 -39.81841 -39.31290 -37.62159 -36.37861 -34.51970 -33.82692 -33.22938 -32.89764 -32.04644 -30.39704 -29.32835 -27.76472 -27.08011 -26.59021 -25.29759 -23.91003 -22.93624 -22.26670 -20.86495 -20.52930 -19.92960 -19.43347 -18.72035 -18.22519 -17.94057 -17.20151 -16.88239 -16.51834 -16.39713 -16.17559 -15.84134 -15.52928 -15.26876 -15.17956 -15.12216 -14.74406 -14.56309 -14.42593 -14.35052 -14.18935 -13.99891 -13.72632 -13.64524 -13.49524 -13.29325 -13.22153 -13.18866 -12.69328 -12.66620 -12.45853 -12.36469 -12.32218 -11.82871 -11.69232 -11.61532 -11.36438 -11.14835 -10.87816 -10.56166 -10.27523 -10.11921 -9.62386 -9.58563 -9.09470 -4.93995 -0.05495 0.21393 0.26193 0.55154 1.14822 1.57172 1.71678 1.79568 1.97966 2.10526 2.19959 2.44239 3.00689 3.37177 3.46667 3.47732 3.55052 3.63408 3.73551 3.78898 3.81558 3.84367 3.98092 4.16146 4.18266 4.28509 4.33691 4.33966 4.43133 4.48896 4.52754 4.61823 4.66313 4.69454 4.71566 4.75912 4.80471 4.85874 4.89210 4.94540 4.97154 5.07346 5.08655 5.11312 5.16366 5.24610 5.51223 5.58104 5.69515 5.73571 6.26744 6.43162 6.73008 7.03810 7.04482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.089 3.911 3 C -0.201 4.201 4 C -0.025 4.025 5 O -0.564 6.564 6 Si 0.750 3.250 7 C -0.077 4.077 8 C -0.083 4.083 9 C -0.079 4.079 10 C 0.594 3.406 11 O -0.550 6.550 12 N -0.688 5.688 13 C 0.189 3.811 14 C -0.057 4.057 15 C -0.108 4.108 16 C -0.093 4.093 17 C -0.105 4.105 18 Br -0.055 7.055 19 C -0.100 4.100 20 C -0.108 4.108 21 C -0.114 4.114 22 C 0.088 3.912 23 H 0.097 0.903 24 O -0.563 6.563 25 C -0.172 4.172 26 N -0.518 5.518 27 H 0.092 0.908 28 H 0.101 0.899 29 H 0.091 0.909 30 H 0.101 0.899 31 H 0.399 0.601 32 H -0.303 1.303 33 H -0.302 1.302 34 H 0.061 0.939 35 H 0.062 0.938 36 H 0.058 0.942 37 H 0.408 0.592 38 H 0.157 0.843 39 H 0.148 0.852 40 H 0.133 0.867 41 H 0.122 0.878 42 H 0.092 0.908 43 H 0.130 0.870 44 H 0.395 0.605 45 H 0.116 0.884 46 H 0.056 0.944 47 H 0.432 0.568 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.977 -2.881 3.521 9.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.031 4.031 3 C -0.207 4.207 4 C -0.136 4.136 5 O -0.373 6.373 6 Si 0.657 3.343 7 C -0.086 4.086 8 C -0.140 4.140 9 C -0.191 4.191 10 C 0.383 3.617 11 O -0.427 6.427 12 N -0.339 5.339 13 C 0.102 3.898 14 C -0.059 4.059 15 C -0.127 4.127 16 C -0.112 4.112 17 C -0.184 4.184 18 Br 0.030 6.970 19 C -0.119 4.119 20 C -0.127 4.127 21 C -0.151 4.151 22 C 0.029 3.971 23 H 0.115 0.885 24 O -0.371 6.371 25 C -0.210 4.210 26 N -0.117 5.117 27 H 0.111 0.889 28 H 0.120 0.880 29 H 0.109 0.891 30 H 0.119 0.881 31 H 0.250 0.750 32 H -0.231 1.231 33 H -0.231 1.231 34 H 0.080 0.920 35 H 0.081 0.919 36 H 0.077 0.923 37 H 0.245 0.755 38 H 0.175 0.825 39 H 0.166 0.834 40 H 0.151 0.849 41 H 0.140 0.860 42 H 0.110 0.890 43 H 0.148 0.852 44 H 0.245 0.755 45 H 0.134 0.866 46 H 0.075 0.925 47 H 0.273 0.727 Dipole moment (debyes) X Y Z Total from point charges -6.323 -3.494 3.046 7.840 hybrid contribution -0.017 -0.643 0.392 0.754 sum -6.341 -4.137 3.438 8.315 Atomic orbital electron populations 1.20707 0.84193 1.05824 1.04648 1.20807 0.95244 0.84783 1.02268 1.18883 0.92133 0.94627 1.15047 1.23948 0.99330 0.89428 1.00883 1.86490 1.68571 1.27987 1.54278 0.96065 0.78686 0.86095 0.73410 1.19956 0.95544 0.91760 1.01332 1.20292 0.94275 0.97629 1.01773 1.20017 0.83960 0.93631 1.21454 1.17010 0.87039 0.81828 0.75842 1.90836 1.25284 1.75583 1.51040 1.45249 1.09597 1.04181 1.74908 1.20060 0.85717 0.92151 0.91890 1.20056 0.94646 0.96927 0.94242 1.21247 0.92148 1.00024 0.99289 1.21335 1.01194 0.97832 0.90885 1.21941 0.94819 1.07762 0.93901 1.96739 1.64312 1.97523 1.38423 1.21207 0.92042 0.98808 0.99872 1.20957 0.99937 0.99431 0.92384 1.23466 1.04934 0.92986 0.93752 1.22707 0.85218 0.94441 0.94779 0.88507 1.86354 1.32689 1.85266 1.32809 1.24190 1.00957 1.00629 0.95225 1.41750 1.04211 1.09226 1.56507 0.88927 0.88037 0.89058 0.88142 0.75009 1.23051 1.23066 0.91994 0.91907 0.92350 0.75520 0.82538 0.83442 0.84877 0.85972 0.88979 0.85178 0.75508 0.86613 0.92481 0.72695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.72 10.14 71.24 0.72 1.44 16 2 C 0.09 0.09 7.13 41.35 0.29 0.38 16 3 C -0.20 -1.31 4.43 -20.12 -0.09 -1.39 16 4 C -0.03 -0.03 2.77 71.24 0.20 0.17 16 5 O -0.56 -1.36 12.32 -148.98 -1.83 -3.19 16 6 Si 0.75 1.23 31.50 68.60 2.16 3.39 16 7 C -0.08 -0.91 5.89 -19.57 -0.12 -1.02 16 8 C -0.08 -1.19 9.12 71.23 0.65 -0.54 16 9 C -0.08 -0.64 7.06 40.35 0.28 -0.35 16 10 C 0.59 5.20 6.70 86.45 0.58 5.78 16 11 O -0.55 -8.89 13.49 -4.34 -0.06 -8.94 16 12 N -0.69 -0.84 3.78 -427.84 -1.62 -2.45 16 13 C 0.19 0.02 0.90 3.38 0.00 0.02 16 14 C -0.06 -0.20 4.41 -19.87 -0.09 -0.29 16 15 C -0.11 -0.21 9.21 22.26 0.21 -0.01 16 16 C -0.09 -0.36 9.79 22.28 0.22 -0.14 16 17 C -0.10 -0.70 6.22 22.31 0.14 -0.56 16 18 Br -0.06 -0.35 33.70 -20.37 -0.69 -1.04 16 19 C -0.10 -0.69 9.79 22.29 0.22 -0.47 16 20 C -0.11 -0.65 8.91 22.27 0.20 -0.45 16 21 C -0.11 0.62 7.17 31.12 0.22 0.84 16 22 C 0.09 -0.44 5.27 31.12 0.16 -0.28 16 23 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 24 O -0.56 1.92 13.10 -148.98 -1.95 -0.03 16 25 C -0.17 0.09 6.63 31.12 0.21 0.30 16 26 N -0.52 -0.18 5.99 -171.93 -1.03 -1.21 16 27 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 28 H 0.10 -0.93 6.93 -2.39 -0.02 -0.94 16 29 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 30 H 0.10 -0.56 6.51 -2.39 -0.02 -0.57 16 31 H 0.40 -3.29 8.74 -74.06 -0.65 -3.94 16 32 H -0.30 -2.39 7.11 99.48 0.71 -1.68 16 33 H -0.30 -3.19 5.82 99.48 0.58 -2.61 16 34 H 0.06 0.95 8.14 -2.39 -0.02 0.93 16 35 H 0.06 0.87 5.08 -2.38 -0.01 0.86 16 36 H 0.06 1.01 6.49 -2.39 -0.02 0.99 16 37 H 0.41 -1.45 7.80 -92.71 -0.72 -2.17 16 38 H 0.16 -0.57 6.00 -2.91 -0.02 -0.59 16 39 H 0.15 0.07 8.06 -2.91 -0.02 0.05 16 40 H 0.13 0.71 8.06 -2.91 -0.02 0.68 16 41 H 0.12 0.62 7.25 -2.91 -0.02 0.60 16 42 H 0.09 -0.57 8.09 -2.39 -0.02 -0.58 16 43 H 0.13 -1.09 8.09 -2.39 -0.02 -1.11 16 44 H 0.40 -3.40 9.12 -74.06 -0.68 -4.08 16 45 H 0.12 -0.41 5.82 -2.38 -0.01 -0.42 16 46 H 0.06 0.33 7.54 -2.39 -0.02 0.31 16 47 H 0.43 -2.90 8.20 -92.70 -0.76 -3.66 16 Total: 0.00 -27.88 398.67 -2.82 -30.70 By element: Atomic # 1 Polarization: -18.84 SS G_CDS: -1.81 Total: -20.65 kcal Atomic # 6 Polarization: -0.58 SS G_CDS: 4.01 Total: 3.43 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: -2.65 Total: -3.66 kcal Atomic # 8 Polarization: -8.32 SS G_CDS: -3.84 Total: -12.17 kcal Atomic # 14 Polarization: 1.23 SS G_CDS: 2.16 Total: 3.39 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -0.69 Total: -1.04 kcal Total: -27.88 -2.82 -30.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12297754.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.810 kcal (2) G-P(sol) polarization free energy of solvation -27.879 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.701 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds