Wall clock time and date at job start Sat Mar 6 2021 23:41:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35661 * 116.99846 * 2 1 4 4 C 1.38403 * 120.12214 * 359.97438 * 3 2 1 5 5 C 1.38721 * 120.02930 * 180.02562 * 4 3 2 6 6 O 1.35717 * 119.86130 * 179.97438 * 5 4 3 7 7 C 1.42904 * 117.00013 * 359.97438 * 6 5 4 8 8 C 1.39150 * 120.27850 * 359.97438 * 5 4 3 9 9 C 1.50694 * 119.88153 * 180.02562 * 8 5 4 10 10 O 1.42900 * 109.47327 * 74.99873 * 9 8 5 11 11 Si 1.86299 * 109.47112 * 195.00231 * 9 8 5 12 12 C 1.37580 * 120.23389 * 359.74500 * 8 5 4 13 13 C 1.39819 * 119.96825 * 0.50648 * 12 8 5 14 14 C 1.47301 * 120.13352 * 179.76428 * 13 12 8 15 15 O 1.21621 * 119.99775 * 179.72697 * 14 13 12 16 16 N 1.34773 * 120.00390 * 359.72868 * 14 13 12 17 17 C 1.46493 * 120.00198 * 184.93765 * 16 14 13 18 18 C 1.50699 * 112.85211 * 305.35498 * 17 16 14 19 19 C 1.38240 * 119.98615 * 334.86920 * 18 17 16 20 20 C 1.38222 * 120.00856 * 179.76758 * 19 18 17 21 21 C 1.38324 * 119.99181 * 0.51456 * 20 19 18 22 22 Br 1.89096 * 120.01493 * 179.76389 * 21 20 19 23 23 C 1.38333 * 119.97688 * 359.74314 * 21 20 19 24 24 C 1.38219 * 119.98813 * 0.02562 * 23 21 20 25 25 C 1.53779 * 113.61505 * 174.15493 * 17 16 14 26 26 C 1.53786 * 87.08219 * 270.80081 * 25 17 16 27 27 H 1.09004 * 113.61596 * 220.01790 * 26 25 17 28 28 O 1.42894 * 113.61486 * 89.19893 * 26 25 17 29 29 C 1.53781 * 87.17147 * 334.60989 * 26 25 17 30 30 H 1.09000 * 109.46719 * 300.00008 * 1 2 3 31 31 H 1.08998 * 109.46956 * 59.99343 * 1 2 3 32 32 H 1.08994 * 109.47343 * 180.02562 * 1 2 3 33 33 H 1.08000 * 119.98359 * 359.97438 * 4 3 2 34 34 H 1.08994 * 109.46949 * 300.00480 * 7 6 5 35 35 H 1.09001 * 109.46570 * 60.00256 * 7 6 5 36 36 H 1.08996 * 109.46844 * 179.97438 * 7 6 5 37 37 H 1.09007 * 109.47195 * 315.00219 * 9 8 5 38 38 H 0.96702 * 113.99579 * 59.99802 * 10 9 8 39 39 H 1.48493 * 110.00066 * 58.67899 * 11 9 8 40 40 H 1.48503 * 109.99932 * 179.97438 * 11 9 8 41 41 H 1.08001 * 120.01194 * 180.25501 * 12 8 5 42 42 H 0.96994 * 119.99643 * 4.94081 * 16 14 13 43 43 H 1.08000 * 120.00136 * 0.03029 * 19 18 17 44 44 H 1.07997 * 120.00425 * 180.23689 * 20 19 18 45 45 H 1.07994 * 120.00523 * 179.97438 * 23 21 20 46 46 H 1.08003 * 119.99268 * 179.97438 * 24 23 21 47 47 H 1.09004 * 113.61722 * 156.25671 * 25 17 16 48 48 H 1.09000 * 113.61843 * 25.34817 * 25 17 16 49 49 H 0.96695 * 114.00311 * 181.53088 * 28 26 25 50 50 H 1.09002 * 113.61482 * 139.93811 * 29 26 25 51 51 H 1.09001 * 113.61185 * 270.83833 * 29 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2088 0.0000 4 6 1.2935 2.3711 -0.0005 5 6 1.9253 3.6061 -0.0011 6 8 1.1852 4.7437 -0.0021 7 6 -0.2359 4.5932 -0.0032 8 6 3.3146 3.6835 -0.0005 9 6 3.9916 5.0298 -0.0005 10 8 3.8935 5.6123 1.3006 11 14 5.7865 4.8224 -0.4545 12 6 4.0724 2.5352 0.0058 13 6 3.4461 1.2851 0.0011 14 6 4.2539 0.0533 0.0026 15 8 3.7066 -1.0328 0.0035 16 7 5.5995 0.1298 0.0031 17 6 6.4026 -1.0906 -0.1046 18 6 6.0565 -2.1136 0.9465 19 6 5.4961 -1.7110 2.1444 20 6 5.1740 -2.6494 3.1068 21 6 5.4223 -3.9904 2.8755 22 35 4.9881 -5.2740 4.1944 23 6 5.9879 -4.3922 1.6787 24 6 6.3053 -3.4536 0.7150 25 6 7.9119 -0.8255 -0.2328 26 6 7.6938 -0.7736 -1.7542 27 1 8.4859 -1.2575 -2.3257 28 8 7.3749 0.5309 -2.2426 29 6 6.4615 -1.6661 -1.5313 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 0.2149 2.3165 -0.0014 34 1 -0.5424 4.0435 -0.8931 35 1 -0.5437 4.0443 0.8868 36 1 -0.7054 5.5768 -0.0035 37 1 3.5058 5.6808 -0.7275 38 1 4.3055 5.0858 1.9993 39 1 5.9020 4.1883 -1.7922 40 1 6.4652 6.1432 -0.4586 41 1 5.1505 2.5994 0.0104 42 1 6.0361 0.9930 0.0748 43 1 5.3060 -0.6636 2.3266 44 1 4.7328 -2.3352 4.0411 45 1 6.1823 -5.4390 1.4978 46 1 6.7473 -3.7672 -0.2192 47 1 8.5313 -1.6620 0.0911 48 1 8.2262 0.1261 0.1960 49 1 7.2137 0.5657 -3.1953 50 1 5.6064 -1.3922 -2.1493 51 1 6.6836 -2.7328 -1.5631 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12297780.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:39 Heat of formation + Delta-G solvation = -77.512322 kcal Electronic energy + Delta-G solvation = -40070.023199 eV Core-core repulsion = 34950.162822 eV Total energy + Delta-G solvation = -5119.860377 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 464.076 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -42.31642 -41.71276 -40.20648 -39.57921 -39.20324 -38.42108 -36.96380 -36.13779 -34.05276 -33.09058 -32.23370 -32.04024 -31.47710 -30.21627 -29.00298 -28.19958 -26.92089 -26.16172 -25.73080 -24.42898 -23.73786 -22.87297 -22.33937 -21.48749 -20.28377 -19.97984 -18.89918 -18.43265 -18.20030 -17.95014 -17.68930 -17.23644 -16.97042 -16.64749 -16.52997 -16.29940 -16.18881 -15.99485 -15.78409 -15.66908 -15.62496 -15.38955 -15.23959 -14.99790 -14.69822 -14.39339 -14.19160 -14.17871 -13.98684 -13.65546 -13.47213 -13.36608 -13.22457 -13.03436 -12.67886 -12.55704 -12.53488 -12.48886 -12.25928 -12.20331 -12.17568 -11.98985 -11.64959 -11.58109 -11.42767 -11.26865 -10.87626 -10.67171 -10.38575 -10.04400 -9.94769 -9.91553 -9.44908 -9.17791 -5.03412 -0.24269 0.08453 0.10272 0.37039 0.66274 1.31054 1.66871 1.79290 2.00223 2.07578 2.11026 2.17215 2.60103 2.63968 3.17653 3.44827 3.51187 3.55863 3.58875 3.64391 3.71543 3.74040 3.80890 3.92070 3.94349 3.95576 4.12220 4.17132 4.23884 4.24383 4.25426 4.26552 4.32691 4.43949 4.49423 4.51565 4.61476 4.63912 4.68322 4.76434 4.77234 4.88324 4.90071 4.95018 4.97199 5.02087 5.05467 5.10322 5.23574 5.25045 5.30519 5.43219 5.74001 5.85030 6.02418 6.28463 6.61881 6.83954 6.90362 7.35599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.301 6.301 3 C 0.218 3.782 4 C -0.313 4.313 5 C 0.211 3.789 6 O -0.314 6.314 7 C 0.013 3.987 8 C -0.204 4.204 9 C -0.058 4.058 10 O -0.553 6.553 11 Si 0.768 3.232 12 C 0.010 3.990 13 C -0.223 4.223 14 C 0.566 3.434 15 O -0.543 6.543 16 N -0.692 5.692 17 C 0.189 3.811 18 C -0.048 4.048 19 C -0.098 4.098 20 C -0.100 4.100 21 C -0.106 4.106 22 Br -0.061 7.061 23 C -0.096 4.096 24 C -0.111 4.111 25 C -0.117 4.117 26 C 0.088 3.912 27 H 0.094 0.906 28 O -0.562 6.562 29 C -0.175 4.175 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.111 0.889 33 H 0.160 0.840 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.118 0.882 37 H 0.098 0.902 38 H 0.393 0.607 39 H -0.274 1.274 40 H -0.295 1.295 41 H 0.165 0.835 42 H 0.413 0.587 43 H 0.126 0.874 44 H 0.131 0.869 45 H 0.143 0.857 46 H 0.155 0.845 47 H 0.127 0.873 48 H 0.098 0.902 49 H 0.395 0.605 50 H 0.058 0.942 51 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.189 1.397 -2.089 3.332 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.212 6.212 3 C 0.168 3.832 4 C -0.332 4.332 5 C 0.163 3.837 6 O -0.226 6.226 7 C -0.081 4.081 8 C -0.205 4.205 9 C -0.168 4.168 10 O -0.361 6.361 11 Si 0.672 3.328 12 C -0.008 4.008 13 C -0.228 4.228 14 C 0.354 3.646 15 O -0.420 6.420 16 N -0.346 5.346 17 C 0.102 3.898 18 C -0.049 4.049 19 C -0.117 4.117 20 C -0.120 4.120 21 C -0.186 4.186 22 Br 0.024 6.976 23 C -0.116 4.116 24 C -0.130 4.130 25 C -0.155 4.155 26 C 0.029 3.971 27 H 0.111 0.889 28 O -0.369 6.369 29 C -0.214 4.214 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.129 0.871 33 H 0.178 0.822 34 H 0.087 0.913 35 H 0.087 0.913 36 H 0.136 0.864 37 H 0.115 0.885 38 H 0.242 0.758 39 H -0.200 1.200 40 H -0.222 1.222 41 H 0.182 0.818 42 H 0.251 0.749 43 H 0.144 0.856 44 H 0.149 0.851 45 H 0.161 0.839 46 H 0.172 0.828 47 H 0.145 0.855 48 H 0.117 0.883 49 H 0.245 0.755 50 H 0.077 0.923 51 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 2.126 0.966 -1.875 2.994 hybrid contribution -1.627 0.624 -0.931 1.976 sum 0.498 1.590 -2.806 3.263 Atomic orbital electron populations 1.23433 0.76785 1.05577 1.02489 1.86370 1.22922 1.25808 1.86055 1.18964 0.91149 0.84571 0.88477 1.21405 1.01916 0.90881 1.19019 1.18944 0.90986 0.84876 0.88882 1.86142 1.21028 1.28837 1.86595 1.23448 0.76355 1.05777 1.02547 1.19593 0.90848 0.96761 1.13291 1.25013 1.11101 0.91655 0.88998 1.86506 1.82646 1.50197 1.16741 0.94249 0.73739 0.81205 0.83567 1.20852 0.99588 0.88840 0.91537 1.19187 0.90680 0.94018 1.18872 1.17899 0.82278 0.88276 0.76126 1.90863 1.72049 1.29645 1.49489 1.45362 1.04633 1.09462 1.75095 1.20070 0.92584 0.84087 0.93066 1.19957 0.96417 0.94406 0.94167 1.20956 0.98061 0.99531 0.93202 1.21175 0.99249 0.91309 1.00290 1.21897 1.07146 0.93631 0.95893 1.96718 1.93148 1.55101 1.52605 1.21276 0.97485 1.01084 0.91754 1.21220 1.00497 0.91547 0.99722 1.23484 0.91864 1.05318 0.94813 1.22685 0.95238 0.83580 0.95603 0.88867 1.86356 1.92477 1.28153 1.29963 1.24280 1.00035 1.01696 0.95390 0.91170 0.91234 0.87062 0.82241 0.91327 0.91291 0.86356 0.88461 0.75789 1.20004 1.22244 0.81820 0.74854 0.85627 0.85075 0.83906 0.82785 0.85499 0.88348 0.75494 0.92270 0.86994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 2 O -0.30 -2.47 8.56 -68.81 -0.59 -3.06 16 3 C 0.22 1.30 6.70 22.82 0.15 1.45 16 4 C -0.31 -0.72 8.01 22.42 0.18 -0.54 16 5 C 0.21 0.71 6.67 22.60 0.15 0.86 16 6 O -0.31 -1.09 9.80 -90.39 -0.89 -1.97 16 7 C 0.01 -0.05 9.81 113.37 1.11 1.06 16 8 C -0.20 -0.29 5.27 -19.80 -0.10 -0.40 16 9 C -0.06 -0.05 2.37 71.23 0.17 0.12 16 10 O -0.55 -0.85 12.88 -148.98 -1.92 -2.77 16 11 Si 0.77 -2.07 29.91 68.60 2.05 -0.02 16 12 C 0.01 -0.01 8.13 22.50 0.18 0.18 16 13 C -0.22 -0.99 5.89 -20.00 -0.12 -1.10 16 14 C 0.57 3.45 6.57 86.63 0.57 4.02 16 15 O -0.54 -7.44 13.42 16.86 0.23 -7.22 16 16 N -0.69 0.35 3.99 -427.01 -1.71 -1.35 16 17 C 0.19 -0.26 0.96 3.44 0.00 -0.26 16 18 C -0.05 -0.12 4.08 -19.86 -0.08 -0.20 16 19 C -0.10 -0.48 8.16 22.27 0.18 -0.30 16 20 C -0.10 -0.62 9.79 22.29 0.22 -0.40 16 21 C -0.11 -0.66 6.22 22.31 0.14 -0.53 16 22 Br -0.06 -0.37 33.70 -20.37 -0.69 -1.05 16 23 C -0.10 -0.35 9.79 22.29 0.22 -0.13 16 24 C -0.11 -0.16 9.24 22.27 0.21 0.05 16 25 C -0.12 0.80 7.16 31.12 0.22 1.02 16 26 C 0.09 -0.59 5.27 31.12 0.16 -0.42 16 27 H 0.09 -0.92 8.14 -2.38 -0.02 -0.94 16 28 O -0.56 2.95 13.09 -148.98 -1.95 1.00 16 29 C -0.18 0.43 6.99 31.18 0.22 0.65 16 30 H 0.07 -0.25 7.66 -2.39 -0.02 -0.27 16 31 H 0.07 -0.25 7.66 -2.39 -0.02 -0.27 16 32 H 0.11 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.16 -0.36 4.50 -2.91 -0.01 -0.38 16 34 H 0.07 -0.42 7.65 -2.39 -0.02 -0.44 16 35 H 0.07 -0.40 7.65 -2.39 -0.02 -0.42 16 36 H 0.12 -0.79 8.14 -2.39 -0.02 -0.81 16 37 H 0.10 0.38 7.82 -2.38 -0.02 0.36 16 38 H 0.39 -2.83 8.70 -74.06 -0.64 -3.47 16 39 H -0.27 -0.41 7.11 99.48 0.71 0.30 16 40 H -0.29 -1.39 7.11 99.48 0.71 -0.69 16 41 H 0.17 -1.17 3.45 -2.91 -0.01 -1.18 16 42 H 0.41 -2.19 6.65 -92.71 -0.62 -2.80 16 43 H 0.13 0.44 7.04 -2.91 -0.02 0.42 16 44 H 0.13 0.59 8.06 -2.91 -0.02 0.57 16 45 H 0.14 0.08 8.06 -2.91 -0.02 0.06 16 46 H 0.15 -0.62 5.95 -2.91 -0.02 -0.64 16 47 H 0.13 -1.19 8.09 -2.38 -0.02 -1.21 16 48 H 0.10 -0.80 8.10 -2.39 -0.02 -0.82 16 49 H 0.40 -4.11 9.12 -74.06 -0.68 -4.78 16 50 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 51 H 0.11 -0.55 5.79 -2.39 -0.01 -0.57 16 Total: 0.00 -26.90 430.93 -1.41 -28.31 By element: Atomic # 1 Polarization: -17.26 SS G_CDS: -0.85 Total: -18.11 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: 4.90 Total: 6.23 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -1.71 Total: -1.35 kcal Atomic # 8 Polarization: -8.90 SS G_CDS: -5.12 Total: -14.01 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: 2.05 Total: -0.02 kcal Atomic # 35 Polarization: -0.37 SS G_CDS: -0.69 Total: -1.05 kcal Total: -26.90 -1.41 -28.31 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12297780.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.200 kcal (2) G-P(sol) polarization free energy of solvation -26.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.414 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.77 seconds