Wall clock time and date at job start Sat Mar 6 2021 23:41:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86294 * 109.47109 * 2 1 4 4 C 1.50701 * 109.47183 * 239.99636 * 2 1 3 5 5 C 1.37851 * 119.89439 * 300.00659 * 4 2 1 6 6 C 1.39655 * 119.87820 * 180.02562 * 5 4 2 7 7 C 1.47692 * 120.16299 * 179.97438 * 6 5 4 8 8 O 1.21580 * 119.99702 * 180.02562 * 7 6 5 9 9 N 1.34766 * 120.00746 * 0.02562 * 7 6 5 10 10 C 1.46497 * 120.00735 * 174.79732 * 9 7 6 11 11 C 1.50698 * 112.85223 * 76.02289 * 10 9 7 12 12 C 1.38244 * 119.98815 * 184.86793 * 11 10 9 13 13 C 1.38217 * 120.00648 * 179.72891 * 12 11 10 14 14 C 1.38320 * 119.98861 * 0.54165 * 13 12 11 15 15 Br 1.89109 * 120.00941 * 179.70839 * 14 13 12 16 16 C 1.38326 * 119.98226 * 359.73042 * 14 13 12 17 17 C 1.38218 * 119.98800 * 359.97438 * 16 14 13 18 18 C 1.53786 * 113.60693 * 304.82512 * 10 9 7 19 19 C 1.53776 * 87.08578 * 270.88288 * 18 10 9 20 20 H 1.08997 * 113.62180 * 219.93790 * 19 18 10 21 21 O 1.42897 * 113.61200 * 89.11597 * 19 18 10 22 22 C 1.53787 * 113.61437 * 207.33388 * 10 9 7 23 23 C 1.39825 * 119.66922 * 359.97438 * 6 5 4 24 24 F 1.35096 * 120.11246 * 179.97438 * 23 6 5 25 25 C 1.38323 * 119.77683 * 0.28351 * 23 6 5 26 26 C 1.38201 * 120.11488 * 359.44052 * 25 23 6 27 27 H 0.96700 * 114.00048 * 299.99609 * 1 2 3 28 28 H 1.09003 * 109.46683 * 119.99921 * 2 1 3 29 29 H 1.48496 * 110.00263 * 300.00034 * 3 2 1 30 30 H 1.48503 * 109.99945 * 61.31940 * 3 2 1 31 31 H 1.08008 * 120.06034 * 359.97438 * 5 4 2 32 32 H 0.97009 * 119.99663 * 354.79150 * 9 7 6 33 33 H 1.08006 * 119.99568 * 359.97438 * 12 11 10 34 34 H 1.08005 * 120.00105 * 180.29522 * 13 12 11 35 35 H 1.08002 * 120.00113 * 180.02562 * 16 14 13 36 36 H 1.08000 * 119.99415 * 179.97438 * 17 16 14 37 37 H 1.08998 * 113.61458 * 25.43827 * 18 10 9 38 38 H 1.09004 * 113.60830 * 156.33793 * 18 10 9 39 39 H 0.96707 * 113.99937 * 180.02562 * 21 19 18 40 40 H 1.08999 * 113.61218 * 203.65635 * 22 10 9 41 41 H 1.08995 * 113.61479 * 334.56259 * 22 10 9 42 42 H 1.07998 * 119.93889 * 179.72429 * 25 23 6 43 43 H 1.08004 * 119.83126 * 180.28513 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.5969 -2.0303 -1.4464 6 6 2.0631 -2.6885 -2.5865 7 6 1.7091 -4.1026 -2.8238 8 8 2.1170 -4.6728 -3.8171 9 7 0.9340 -4.7609 -1.9395 10 6 0.4887 -6.1261 -2.2296 11 6 1.5768 -7.1504 -2.0350 12 6 1.3472 -8.4733 -2.3641 13 6 2.3467 -9.4121 -2.1910 14 6 3.5731 -9.0298 -1.6781 15 35 4.9383 -10.3152 -1.4334 16 6 3.8004 -7.7069 -1.3437 17 6 2.8023 -6.7677 -1.5228 18 6 -0.2514 -6.2605 -3.5709 19 6 -1.5440 -5.9459 -2.7997 20 1 -2.3993 -6.5411 -3.1194 21 8 -1.8381 -4.5497 -2.7209 22 6 -0.8394 -6.4985 -1.5494 23 6 2.8666 -2.0021 -3.5020 24 9 3.3229 -2.6303 -4.6076 25 6 3.1981 -0.6796 -3.2688 26 6 2.7271 -0.0353 -2.1404 27 1 -0.3933 0.4416 0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5616 2.4679 -1.2084 30 1 1.5879 2.4585 1.2243 31 1 0.9762 -2.5545 -0.7348 32 1 0.6710 -4.3308 -1.1107 33 1 0.3879 -8.7726 -2.7601 34 1 2.1688 -10.4448 -2.4526 35 1 4.7580 -7.4080 -0.9436 36 1 2.9796 -5.7349 -1.2614 37 1 0.0204 -5.4955 -4.2982 38 1 -0.2246 -7.2684 -3.9852 39 1 -2.6498 -4.3454 -2.2365 40 1 -0.9733 -7.5713 -1.4111 41 1 -1.0423 -5.9254 -0.6447 42 1 3.8222 -0.1482 -3.9719 43 1 2.9850 0.9987 -1.9652 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_12335834.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:47 Heat of formation + Delta-G solvation = -52.813675 kcal Electronic energy + Delta-G solvation = -32677.004521 eV Core-core repulsion = 28037.200804 eV Total energy + Delta-G solvation = -4639.803717 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.036 amu Computer time = 2.60 seconds Orbital eigenvalues (eV) -49.78207 -42.26719 -40.74111 -39.63828 -39.15658 -37.70976 -36.32435 -34.36054 -33.10918 -32.61883 -32.33109 -31.79216 -30.22700 -27.08153 -26.69815 -26.20015 -24.98017 -23.88319 -23.07957 -22.35530 -21.47381 -20.31811 -19.16402 -18.77575 -18.71742 -18.15892 -17.97195 -17.59439 -16.90196 -16.64998 -16.42652 -16.36797 -16.01072 -15.83363 -15.73232 -15.63386 -15.27828 -15.06139 -14.60172 -14.45301 -14.35537 -14.30360 -14.13367 -13.84012 -13.78361 -13.46262 -13.24800 -13.11229 -12.74409 -12.64189 -12.52859 -12.38304 -12.23636 -11.89430 -11.63542 -11.46416 -11.17714 -11.07777 -10.85529 -10.63431 -10.32834 -10.07452 -9.99370 -9.76320 -9.48608 -5.10743 -0.43742 -0.03079 0.07016 0.33629 0.72254 1.10469 1.46136 1.71444 1.82707 1.91978 2.52432 2.53815 2.95847 3.07475 3.09574 3.30950 3.41117 3.43192 3.53458 3.55598 3.61909 3.73124 3.81899 3.91808 3.97056 4.06805 4.17211 4.21028 4.33013 4.41537 4.48362 4.50840 4.58649 4.65639 4.70565 4.74826 4.83562 4.84274 4.91592 4.95571 5.05855 5.12757 5.19537 5.23300 5.34015 5.59060 5.64698 5.79459 6.25705 6.41426 6.58404 7.20733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.074 4.074 3 Si 0.680 3.320 4 C -0.094 4.094 5 C -0.027 4.027 6 C -0.173 4.173 7 C 0.565 3.435 8 O -0.509 6.509 9 N -0.696 5.696 10 C 0.197 3.803 11 C -0.059 4.059 12 C -0.108 4.108 13 C -0.087 4.087 14 C -0.091 4.091 15 Br -0.051 7.051 16 C -0.087 4.087 17 C -0.094 4.094 18 C -0.128 4.128 19 C 0.080 3.920 20 H 0.075 0.925 21 O -0.543 6.543 22 C -0.163 4.163 23 C 0.166 3.834 24 F -0.111 7.111 25 C -0.157 4.157 26 C -0.058 4.058 27 H 0.382 0.618 28 H 0.081 0.919 29 H -0.252 1.252 30 H -0.258 1.258 31 H 0.137 0.863 32 H 0.403 0.597 33 H 0.133 0.867 34 H 0.135 0.865 35 H 0.132 0.868 36 H 0.124 0.876 37 H 0.094 0.906 38 H 0.107 0.893 39 H 0.381 0.619 40 H 0.108 0.892 41 H 0.083 0.917 42 H 0.150 0.850 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.635 2.708 6.096 7.171 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.184 4.184 3 Si 0.581 3.419 4 C -0.094 4.094 5 C -0.046 4.046 6 C -0.177 4.177 7 C 0.352 3.648 8 O -0.384 6.384 9 N -0.348 5.348 10 C 0.110 3.890 11 C -0.061 4.061 12 C -0.127 4.127 13 C -0.107 4.107 14 C -0.171 4.171 15 Br 0.035 6.965 16 C -0.107 4.107 17 C -0.113 4.113 18 C -0.166 4.166 19 C 0.020 3.980 20 H 0.093 0.907 21 O -0.348 6.348 22 C -0.201 4.201 23 C 0.146 3.854 24 F -0.089 7.089 25 C -0.175 4.175 26 C -0.076 4.076 27 H 0.231 0.769 28 H 0.099 0.901 29 H -0.176 1.176 30 H -0.183 1.183 31 H 0.154 0.846 32 H 0.239 0.761 33 H 0.150 0.850 34 H 0.153 0.847 35 H 0.150 0.850 36 H 0.142 0.858 37 H 0.113 0.887 38 H 0.125 0.875 39 H 0.228 0.772 40 H 0.126 0.874 41 H 0.102 0.898 42 H 0.168 0.832 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.389 2.358 4.508 5.273 hybrid contribution -1.901 0.239 1.070 2.194 sum -3.289 2.597 5.577 6.977 Atomic orbital electron populations 1.86586 1.17492 1.80200 1.49978 1.24748 0.84741 1.11076 0.97789 0.95098 0.91605 0.74435 0.80810 1.19193 0.99684 0.94046 0.96522 1.20968 0.95156 0.93765 0.94705 1.20029 1.04544 0.95248 0.97867 1.17875 0.78339 0.85368 0.83225 1.90883 1.51987 1.68016 1.27512 1.45293 1.52614 1.14215 1.22714 1.19856 0.90550 0.80603 0.97997 1.19951 0.94909 0.93839 0.97379 1.20882 0.99440 0.91898 1.00471 1.21080 0.91463 1.00335 0.97807 1.21833 0.94664 0.94024 1.06553 1.96768 1.48957 1.54530 1.96259 1.21118 0.99777 0.91131 0.98666 1.20910 0.92429 0.99339 0.98668 1.23479 0.92664 1.03929 0.96496 1.22719 0.96972 0.82948 0.95341 0.90669 1.86547 1.47590 1.22103 1.78607 1.24070 0.93772 1.03091 0.99128 1.17733 0.93737 0.90568 0.83395 1.91628 1.85979 1.82043 1.49215 1.21130 1.03597 0.92986 0.99826 1.21014 0.94918 0.99557 0.92107 0.76941 0.90107 1.17637 1.18317 0.84553 0.76082 0.84966 0.84744 0.85002 0.85762 0.88747 0.87484 0.77189 0.87403 0.89797 0.83195 0.84107 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 34. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.62 12.74 -35.23 -0.45 0.17 16 2 C -0.07 0.17 2.81 36.01 0.10 0.27 16 3 Si 0.68 -1.83 29.78 -169.99 -5.06 -6.90 16 4 C -0.09 0.07 5.42 -104.68 -0.57 -0.50 16 5 C -0.03 0.01 9.09 -39.19 -0.36 -0.35 16 6 C -0.17 -0.36 5.88 -104.91 -0.62 -0.98 16 7 C 0.56 1.86 6.18 -12.40 -0.08 1.78 16 8 O -0.51 -3.53 13.58 5.30 0.07 -3.45 16 9 N -0.70 -0.20 3.62 -48.90 -0.18 -0.38 16 10 C 0.20 0.02 0.97 -132.16 -0.13 -0.11 16 11 C -0.06 -0.07 5.06 -104.62 -0.53 -0.60 16 12 C -0.11 -0.04 8.43 -39.59 -0.33 -0.37 16 13 C -0.09 -0.10 9.79 -39.56 -0.39 -0.49 16 14 C -0.09 -0.21 6.22 -39.52 -0.25 -0.45 16 15 Br -0.05 -0.11 33.70 -68.01 -2.29 -2.40 16 16 C -0.09 -0.19 9.79 -39.56 -0.39 -0.58 16 17 C -0.09 -0.19 9.00 -39.59 -0.36 -0.55 16 18 C -0.13 -0.11 6.53 -25.92 -0.17 -0.28 16 19 C 0.08 -0.11 5.28 -25.92 -0.14 -0.25 16 20 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 21 O -0.54 0.21 13.08 -35.23 -0.46 -0.25 16 22 C -0.16 0.41 7.11 -25.91 -0.18 0.22 16 23 C 0.17 0.46 7.29 -38.96 -0.28 0.18 16 24 F -0.11 -0.60 15.55 2.25 0.04 -0.57 16 25 C -0.16 0.00 10.01 -39.56 -0.40 -0.40 16 26 C -0.06 0.07 8.66 -39.51 -0.34 -0.27 16 27 H 0.38 -1.88 8.74 45.56 0.40 -1.48 16 28 H 0.08 -0.35 7.96 -51.93 -0.41 -0.76 16 29 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 30 H -0.26 0.12 7.11 56.52 0.40 0.52 16 31 H 0.14 -0.30 6.42 -52.48 -0.34 -0.64 16 32 H 0.40 -0.79 6.81 -40.82 -0.28 -1.07 16 33 H 0.13 -0.28 6.74 -52.48 -0.35 -0.63 16 34 H 0.13 -0.04 8.06 -52.48 -0.42 -0.47 16 35 H 0.13 0.14 8.06 -52.49 -0.42 -0.29 16 36 H 0.12 0.19 6.53 -52.49 -0.34 -0.15 16 37 H 0.09 0.41 6.67 -51.93 -0.35 0.06 16 38 H 0.11 -0.06 6.66 -51.93 -0.35 -0.40 16 39 H 0.38 -1.65 9.12 45.56 0.42 -1.24 16 40 H 0.11 -0.39 7.29 -51.93 -0.38 -0.76 16 41 H 0.08 -0.28 8.13 -51.93 -0.42 -0.70 16 42 H 0.15 -0.31 8.06 -52.49 -0.42 -0.74 16 43 H 0.14 -0.49 4.86 -52.48 -0.25 -0.75 16 LS Contribution 378.01 15.07 5.70 5.70 Total: 0.00 -10.06 378.01 -11.58 -21.64 By element: Atomic # 1 Polarization: -6.30 SS G_CDS: -3.55 Total: -9.84 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -5.40 Total: -3.71 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -0.18 Total: -0.38 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -0.84 Total: -3.53 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 0.04 Total: -0.57 kcal Atomic # 14 Polarization: -1.83 SS G_CDS: -5.06 Total: -6.90 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.29 Total: -2.40 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -10.06 -11.58 -21.64 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12335834.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.176 kcal (2) G-P(sol) polarization free energy of solvation -10.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.637 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.814 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.60 seconds