Wall clock time and date at job start Sat Mar 6 2021 23:41:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.46793 * 2 1 4 4 C 1.50696 * 109.47327 * 239.99990 * 2 1 3 5 5 C 1.38233 * 119.99884 * 299.99636 * 4 2 1 6 6 C 1.38233 * 119.99963 * 179.97438 * 5 4 2 7 7 C 1.38236 * 119.99794 * 359.95947 * 6 5 4 8 8 C 1.50702 * 119.99852 * 180.02562 * 7 6 5 9 9 C 1.50697 * 109.47317 * 89.99849 * 8 7 6 10 10 O 1.21280 * 120.00076 * 0.02562 * 9 8 7 11 11 N 1.34779 * 120.00228 * 180.02562 * 9 8 7 12 12 C 1.46493 * 120.00219 * 184.61151 * 11 9 8 13 13 C 1.50706 * 112.84868 * 305.10910 * 12 11 9 14 14 C 1.38243 * 119.98814 * 335.13101 * 13 12 11 15 15 C 1.38214 * 120.00734 * 179.76777 * 14 13 12 16 16 C 1.38326 * 119.98997 * 0.50876 * 15 14 13 17 17 Br 1.89102 * 120.00819 * 179.76903 * 16 15 14 18 18 C 1.38323 * 119.98199 * 359.74295 * 16 15 14 19 19 C 1.38222 * 119.98769 * 0.02562 * 18 16 15 20 20 C 1.53783 * 113.61745 * 173.91429 * 12 11 9 21 21 C 1.53778 * 87.07969 * 270.88441 * 20 12 11 22 22 H 1.09004 * 113.61193 * 220.01911 * 21 20 12 23 23 O 1.42893 * 113.61729 * 89.11525 * 21 20 12 24 24 C 1.53783 * 113.61859 * 76.41439 * 12 11 9 25 25 C 1.38233 * 120.00272 * 0.27446 * 7 6 5 26 26 C 1.38234 * 119.99730 * 359.51188 * 25 7 6 27 27 H 0.96702 * 114.00286 * 60.00080 * 1 2 3 28 28 H 1.09002 * 109.47359 * 119.99283 * 2 1 3 29 29 H 1.48501 * 109.99991 * 298.67747 * 3 2 1 30 30 H 1.48505 * 110.00334 * 59.99916 * 3 2 1 31 31 H 1.07995 * 120.00106 * 359.97438 * 5 4 2 32 32 H 1.08000 * 120.00284 * 179.97438 * 6 5 4 33 33 H 1.09001 * 109.47286 * 329.99293 * 8 7 6 34 34 H 1.09000 * 109.47280 * 210.00081 * 8 7 6 35 35 H 0.97005 * 119.99855 * 4.88408 * 11 9 8 36 36 H 1.08005 * 119.99301 * 0.02562 * 14 13 12 37 37 H 1.08002 * 120.00706 * 180.28066 * 15 14 13 38 38 H 1.07999 * 120.00653 * 179.97438 * 18 16 15 39 39 H 1.08001 * 119.99346 * 180.02562 * 19 18 16 40 40 H 1.09002 * 113.61267 * 25.43146 * 20 12 11 41 41 H 1.08996 * 113.61624 * 156.25060 * 20 12 11 42 42 H 0.96707 * 114.00074 * 179.97438 * 23 21 20 43 43 H 1.08996 * 113.61591 * 203.66326 * 24 12 11 44 44 H 1.08996 * 113.61146 * 334.57138 * 24 12 11 45 45 H 1.08001 * 119.99997 * 179.72796 * 25 7 6 46 46 H 1.08008 * 119.99897 * 180.25173 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5975 -2.0338 -1.4491 6 6 2.0578 -2.6853 -2.5780 7 6 2.8514 -2.0131 -3.4886 8 6 3.3528 -2.7231 -4.7197 9 6 2.3590 -2.5502 -5.8393 10 8 1.3438 -1.9126 -5.6558 11 7 2.5985 -3.1039 -7.0445 12 6 1.6840 -2.8523 -8.1609 13 6 0.2546 -3.2035 -7.8372 14 6 -0.0221 -4.1419 -6.8605 15 6 -1.3329 -4.4608 -6.5599 16 6 -2.3677 -3.8486 -7.2438 17 35 -4.1612 -4.2893 -6.8375 18 6 -2.0903 -2.9134 -8.2246 19 6 -0.7792 -2.5916 -8.5212 20 6 2.1723 -3.4305 -9.4996 21 6 2.8977 -2.0931 -9.7227 22 1 2.8433 -1.7329 -10.7501 23 8 4.2248 -2.0664 -9.1935 24 6 1.8503 -1.4597 -8.7917 25 6 3.1893 -0.6910 -3.2675 26 6 2.7252 -0.0383 -2.1408 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5137 0.8901 29 1 1.5878 2.4586 -1.2243 30 1 1.5613 2.4680 1.2085 31 1 0.9770 -2.5588 -0.7380 32 1 1.7974 -3.7195 -2.7487 33 1 3.4747 -3.7844 -4.5027 34 1 4.3126 -2.3007 -5.0173 35 1 3.3742 -3.6723 -7.1716 36 1 0.7861 -4.6229 -6.3294 37 1 -1.5492 -5.1906 -5.7937 38 1 -2.8979 -2.4355 -8.7590 39 1 -0.5624 -1.8612 -9.2867 40 1 2.8465 -4.2797 -9.3884 41 1 1.3698 -3.6178 -10.2130 42 1 4.6863 -1.2278 -9.3311 43 1 0.9600 -1.1069 -9.3122 44 1 2.2647 -0.7179 -8.1091 45 1 3.8129 -0.1671 -3.9768 46 1 2.9859 0.9959 -1.9701 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_12335836.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:53 Heat of formation + Delta-G solvation = -17.848121 kcal Electronic energy + Delta-G solvation = -31800.164613 eV Core-core repulsion = 27475.793473 eV Total energy + Delta-G solvation = -4324.371140 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 2.87 seconds Orbital eigenvalues (eV) -42.22906 -40.76341 -39.63989 -39.38477 -37.66032 -36.36265 -34.25694 -33.74026 -33.07952 -31.95758 -31.88481 -30.32894 -29.62564 -27.16479 -26.17715 -25.16031 -23.79386 -23.74768 -22.70800 -22.17334 -21.30305 -20.34678 -18.78871 -18.48444 -18.04112 -17.96969 -17.32501 -16.91041 -16.59937 -16.32434 -16.15436 -16.10607 -15.94771 -15.60269 -15.36186 -15.23650 -14.83160 -14.70601 -14.46332 -14.41227 -14.20653 -13.92851 -13.81747 -13.65746 -13.23871 -13.16029 -13.07857 -12.80677 -12.62493 -12.30765 -12.20968 -12.19590 -11.95608 -11.68269 -11.56031 -11.54318 -11.16283 -11.03803 -10.78408 -10.52888 -10.09183 -9.94958 -9.81218 -9.58084 -9.42230 -4.92282 0.10912 0.28995 0.37340 0.51821 0.74613 1.33938 1.65536 1.67846 2.01101 2.01864 2.57795 2.78831 2.86332 3.31845 3.42815 3.45157 3.49993 3.60361 3.64324 3.77740 3.80676 3.88604 3.92590 4.01163 4.06479 4.19208 4.25987 4.31644 4.40486 4.43366 4.47653 4.50967 4.55512 4.60687 4.65046 4.73104 4.75281 4.79212 4.84494 4.97703 5.03586 5.11643 5.21904 5.25741 5.35741 5.42746 5.59345 5.63033 5.65192 5.82623 6.04866 6.44600 6.46656 6.51621 7.28230 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.074 4.074 3 Si 0.683 3.317 4 C -0.117 4.117 5 C -0.090 4.090 6 C -0.103 4.103 7 C -0.060 4.060 8 C -0.103 4.103 9 C 0.513 3.487 10 O -0.512 6.512 11 N -0.705 5.705 12 C 0.198 3.802 13 C -0.048 4.048 14 C -0.090 4.090 15 C -0.087 4.087 16 C -0.091 4.091 17 Br -0.052 7.052 18 C -0.088 4.088 19 C -0.109 4.109 20 C -0.125 4.125 21 C 0.081 3.919 22 H 0.075 0.925 23 O -0.548 6.548 24 C -0.172 4.172 25 C -0.100 4.100 26 C -0.114 4.114 27 H 0.377 0.623 28 H 0.118 0.882 29 H -0.261 1.261 30 H -0.258 1.258 31 H 0.125 0.875 32 H 0.121 0.879 33 H 0.103 0.897 34 H 0.106 0.894 35 H 0.407 0.593 36 H 0.122 0.878 37 H 0.130 0.870 38 H 0.133 0.867 39 H 0.132 0.868 40 H 0.088 0.912 41 H 0.112 0.888 42 H 0.384 0.616 43 H 0.102 0.898 44 H 0.081 0.919 45 H 0.123 0.877 46 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.080 -0.678 -4.262 8.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.184 4.184 3 Si 0.584 3.416 4 C -0.118 4.118 5 C -0.108 4.108 6 C -0.121 4.121 7 C -0.061 4.061 8 C -0.143 4.143 9 C 0.299 3.701 10 O -0.386 6.386 11 N -0.358 5.358 12 C 0.111 3.889 13 C -0.050 4.050 14 C -0.109 4.109 15 C -0.107 4.107 16 C -0.170 4.170 17 Br 0.033 6.967 18 C -0.108 4.108 19 C -0.128 4.128 20 C -0.163 4.163 21 C 0.022 3.978 22 H 0.093 0.907 23 O -0.354 6.354 24 C -0.211 4.211 25 C -0.118 4.118 26 C -0.132 4.132 27 H 0.224 0.776 28 H 0.135 0.865 29 H -0.186 1.186 30 H -0.183 1.183 31 H 0.143 0.857 32 H 0.139 0.861 33 H 0.121 0.879 34 H 0.124 0.876 35 H 0.243 0.757 36 H 0.140 0.860 37 H 0.148 0.852 38 H 0.151 0.849 39 H 0.150 0.850 40 H 0.106 0.894 41 H 0.130 0.870 42 H 0.232 0.768 43 H 0.120 0.880 44 H 0.100 0.900 45 H 0.141 0.859 46 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 5.401 -0.443 -3.231 6.310 hybrid contribution -0.250 0.206 -0.813 0.875 sum 5.151 -0.237 -4.044 6.553 Atomic orbital electron populations 1.86584 1.17708 1.79975 1.49361 1.25022 0.83992 1.10892 0.98527 0.95124 0.91667 0.74648 0.80149 1.20256 0.99313 0.95203 0.96982 1.20946 0.98664 0.93849 0.97369 1.20992 0.97073 0.99951 0.94112 1.19245 0.98042 0.94191 0.94600 1.20686 0.98972 1.02867 0.91764 1.20553 0.87312 0.79237 0.82958 1.90795 1.26775 1.39152 1.81869 1.45606 1.28589 1.52484 1.09094 1.19824 0.86174 0.96659 0.86247 1.19728 0.94007 0.95516 0.95717 1.20808 0.95821 0.97324 0.96927 1.21066 0.91743 0.99153 0.98752 1.21799 0.91007 1.02470 1.01727 1.96759 1.12591 1.93171 1.94182 1.21064 0.97267 0.96169 0.96269 1.20943 0.91488 0.99878 1.00477 1.23431 1.00009 0.97663 0.95193 1.22670 0.82469 0.96757 0.95929 0.90684 1.86400 1.26092 1.40797 1.82145 1.24186 1.00533 0.96831 0.99549 1.20883 0.99992 0.93797 0.97102 1.20929 0.98320 0.99342 0.94598 0.77570 0.86454 1.18571 1.18283 0.85696 0.86125 0.87918 0.87604 0.75716 0.86007 0.85192 0.84924 0.85038 0.89372 0.86983 0.76753 0.88017 0.90018 0.85908 0.85672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 34. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.47 12.77 -35.23 -0.45 -1.92 16 2 C -0.07 -0.08 2.82 36.00 0.10 0.03 16 3 Si 0.68 0.09 29.79 -169.99 -5.06 -4.98 16 4 C -0.12 -0.18 5.39 -104.63 -0.56 -0.74 16 5 C -0.09 -0.17 9.61 -39.58 -0.38 -0.55 16 6 C -0.10 -0.14 9.70 -39.58 -0.38 -0.52 16 7 C -0.06 -0.04 4.37 -104.62 -0.46 -0.50 16 8 C -0.10 0.18 5.83 -29.04 -0.17 0.01 16 9 C 0.51 0.22 6.62 -10.99 -0.07 0.15 16 10 O -0.51 -2.35 14.34 5.56 0.08 -2.27 16 11 N -0.70 1.07 4.03 -47.92 -0.19 0.88 16 12 C 0.20 -0.20 0.95 -132.16 -0.13 -0.32 16 13 C -0.05 -0.05 4.10 -104.62 -0.43 -0.47 16 14 C -0.09 -0.15 8.18 -39.59 -0.32 -0.48 16 15 C -0.09 -0.20 9.79 -39.56 -0.39 -0.59 16 16 C -0.09 -0.24 6.22 -39.52 -0.25 -0.49 16 17 Br -0.05 -0.14 33.70 -68.01 -2.29 -2.43 16 18 C -0.09 -0.15 9.79 -39.56 -0.39 -0.54 16 19 C -0.11 -0.08 9.24 -39.59 -0.37 -0.45 16 20 C -0.13 0.33 7.15 -25.92 -0.19 0.14 16 21 C 0.08 -0.23 5.28 -25.92 -0.14 -0.37 16 22 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 23 O -0.55 1.46 13.08 -35.23 -0.46 1.00 16 24 C -0.17 0.25 6.98 -25.92 -0.18 0.07 16 25 C -0.10 -0.08 9.70 -39.58 -0.38 -0.47 16 26 C -0.11 -0.11 8.67 -39.58 -0.34 -0.45 16 27 H 0.38 0.17 8.70 45.56 0.40 0.57 16 28 H 0.12 0.01 7.96 -51.93 -0.41 -0.40 16 29 H -0.26 -0.63 7.11 56.52 0.40 -0.22 16 30 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 31 H 0.13 0.19 8.06 -52.49 -0.42 -0.24 16 32 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 33 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 34 H 0.11 -0.37 8.08 -51.93 -0.42 -0.79 16 35 H 0.41 -1.34 8.63 -40.82 -0.35 -1.70 16 36 H 0.12 0.08 7.03 -52.48 -0.37 -0.29 16 37 H 0.13 0.17 8.06 -52.49 -0.42 -0.26 16 38 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 39 H 0.13 -0.20 5.96 -52.49 -0.31 -0.51 16 40 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 41 H 0.11 -0.38 8.09 -51.93 -0.42 -0.80 16 42 H 0.38 -2.19 9.12 45.56 0.42 -1.78 16 43 H 0.10 -0.22 5.80 -51.93 -0.30 -0.52 16 44 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 45 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 46 H 0.13 -0.09 4.88 -52.48 -0.26 -0.35 16 LS Contribution 399.33 15.07 6.02 6.02 Total: 0.00 -9.09 399.33 -12.81 -21.90 By element: Atomic # 1 Polarization: -6.63 SS G_CDS: -5.03 Total: -11.66 kcal Atomic # 6 Polarization: -1.12 SS G_CDS: -5.42 Total: -6.54 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.19 Total: 0.88 kcal Atomic # 8 Polarization: -2.36 SS G_CDS: -0.83 Total: -3.19 kcal Atomic # 14 Polarization: 0.09 SS G_CDS: -5.06 Total: -4.98 kcal Atomic # 35 Polarization: -0.14 SS G_CDS: -2.29 Total: -2.43 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.09 -12.81 -21.90 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12335836.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.056 kcal (2) G-P(sol) polarization free energy of solvation -9.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.035 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.814 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.904 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.848 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.88 seconds