Wall clock time and date at job start Sat Mar 6 2021 23:41:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.46793 * 2 1 4 4 C 1.50696 * 109.47327 * 239.99990 * 2 1 3 5 5 C 1.38233 * 119.99884 * 299.99636 * 4 2 1 6 6 C 1.38233 * 119.99963 * 179.97438 * 5 4 2 7 7 C 1.38236 * 119.99794 * 359.95947 * 6 5 4 8 8 C 1.50702 * 119.99852 * 180.02562 * 7 6 5 9 9 C 1.50697 * 109.47317 * 89.99849 * 8 7 6 10 10 O 1.21280 * 120.00076 * 0.02562 * 9 8 7 11 11 N 1.34779 * 120.00228 * 180.02562 * 9 8 7 12 12 C 1.46493 * 120.00219 * 184.61151 * 11 9 8 13 13 C 1.50706 * 112.84868 * 305.10910 * 12 11 9 14 14 C 1.38243 * 119.98814 * 335.13101 * 13 12 11 15 15 C 1.38214 * 120.00734 * 179.76777 * 14 13 12 16 16 C 1.38326 * 119.98997 * 0.50876 * 15 14 13 17 17 Br 1.89102 * 120.00819 * 179.76903 * 16 15 14 18 18 C 1.38323 * 119.98199 * 359.74295 * 16 15 14 19 19 C 1.38222 * 119.98769 * 0.02562 * 18 16 15 20 20 C 1.53783 * 113.61745 * 173.91429 * 12 11 9 21 21 C 1.53778 * 87.07969 * 270.88441 * 20 12 11 22 22 H 1.09004 * 113.61193 * 220.01911 * 21 20 12 23 23 O 1.42893 * 113.61729 * 89.11525 * 21 20 12 24 24 C 1.53783 * 113.61859 * 76.41439 * 12 11 9 25 25 C 1.38233 * 120.00272 * 0.27446 * 7 6 5 26 26 C 1.38234 * 119.99730 * 359.51188 * 25 7 6 27 27 H 0.96702 * 114.00286 * 60.00080 * 1 2 3 28 28 H 1.09002 * 109.47359 * 119.99283 * 2 1 3 29 29 H 1.48501 * 109.99991 * 298.67747 * 3 2 1 30 30 H 1.48505 * 110.00334 * 59.99916 * 3 2 1 31 31 H 1.07995 * 120.00106 * 359.97438 * 5 4 2 32 32 H 1.08000 * 120.00284 * 179.97438 * 6 5 4 33 33 H 1.09001 * 109.47286 * 329.99293 * 8 7 6 34 34 H 1.09000 * 109.47280 * 210.00081 * 8 7 6 35 35 H 0.97005 * 119.99855 * 4.88408 * 11 9 8 36 36 H 1.08005 * 119.99301 * 0.02562 * 14 13 12 37 37 H 1.08002 * 120.00706 * 180.28066 * 15 14 13 38 38 H 1.07999 * 120.00653 * 179.97438 * 18 16 15 39 39 H 1.08001 * 119.99346 * 180.02562 * 19 18 16 40 40 H 1.09002 * 113.61267 * 25.43146 * 20 12 11 41 41 H 1.08996 * 113.61624 * 156.25060 * 20 12 11 42 42 H 0.96707 * 114.00074 * 179.97438 * 23 21 20 43 43 H 1.08996 * 113.61591 * 203.66326 * 24 12 11 44 44 H 1.08996 * 113.61146 * 334.57138 * 24 12 11 45 45 H 1.08001 * 119.99997 * 179.72796 * 25 7 6 46 46 H 1.08008 * 119.99897 * 180.25173 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5975 -2.0338 -1.4491 6 6 2.0578 -2.6853 -2.5780 7 6 2.8514 -2.0131 -3.4886 8 6 3.3528 -2.7231 -4.7197 9 6 2.3590 -2.5502 -5.8393 10 8 1.3438 -1.9126 -5.6558 11 7 2.5985 -3.1039 -7.0445 12 6 1.6840 -2.8523 -8.1609 13 6 0.2546 -3.2035 -7.8372 14 6 -0.0221 -4.1419 -6.8605 15 6 -1.3329 -4.4608 -6.5599 16 6 -2.3677 -3.8486 -7.2438 17 35 -4.1612 -4.2893 -6.8375 18 6 -2.0903 -2.9134 -8.2246 19 6 -0.7792 -2.5916 -8.5212 20 6 2.1723 -3.4305 -9.4996 21 6 2.8977 -2.0931 -9.7227 22 1 2.8433 -1.7329 -10.7501 23 8 4.2248 -2.0664 -9.1935 24 6 1.8503 -1.4597 -8.7917 25 6 3.1893 -0.6910 -3.2675 26 6 2.7252 -0.0383 -2.1408 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5137 0.8901 29 1 1.5878 2.4586 -1.2243 30 1 1.5613 2.4680 1.2085 31 1 0.9770 -2.5588 -0.7380 32 1 1.7974 -3.7195 -2.7487 33 1 3.4747 -3.7844 -4.5027 34 1 4.3126 -2.3007 -5.0173 35 1 3.3742 -3.6723 -7.1716 36 1 0.7861 -4.6229 -6.3294 37 1 -1.5492 -5.1906 -5.7937 38 1 -2.8979 -2.4355 -8.7590 39 1 -0.5624 -1.8612 -9.2867 40 1 2.8465 -4.2797 -9.3884 41 1 1.3698 -3.6178 -10.2130 42 1 4.6863 -1.2278 -9.3311 43 1 0.9600 -1.1069 -9.3122 44 1 2.2647 -0.7179 -8.1091 45 1 3.8129 -0.1671 -3.9768 46 1 2.9859 0.9959 -1.9701 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12335836.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:51 Heat of formation + Delta-G solvation = -16.866353 kcal Electronic energy + Delta-G solvation = -31800.122040 eV Core-core repulsion = 27475.793473 eV Total energy + Delta-G solvation = -4324.328567 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.061 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.15484 -40.78084 -39.70155 -39.32879 -37.78383 -36.19567 -34.26710 -33.70310 -33.15900 -32.02270 -31.92902 -30.39948 -29.63089 -26.98871 -26.18081 -25.12669 -23.84683 -23.80048 -22.73224 -22.14039 -21.26104 -20.25946 -18.67188 -18.59130 -18.00909 -17.83552 -17.30997 -16.92961 -16.62455 -16.31482 -16.22930 -16.16245 -15.97833 -15.60595 -15.33125 -15.16925 -14.83164 -14.77363 -14.49662 -14.45512 -14.24989 -14.00508 -13.71980 -13.47340 -13.28624 -13.12031 -13.04612 -12.81288 -12.54322 -12.29381 -12.27401 -12.25419 -12.02366 -11.65391 -11.63679 -11.49525 -11.33729 -10.94767 -10.74111 -10.63788 -10.07086 -10.01275 -9.87326 -9.62987 -9.50074 -4.97624 0.02069 0.24311 0.28293 0.45613 0.59311 1.27621 1.57096 1.70171 1.91116 2.10941 2.51929 2.77405 3.12389 3.36189 3.48785 3.55920 3.60284 3.62584 3.75099 3.81256 3.85737 3.86812 3.90697 4.04903 4.11566 4.24373 4.36123 4.40035 4.42163 4.47162 4.53326 4.60563 4.63688 4.69276 4.72042 4.80329 4.85364 4.91533 4.98220 5.02151 5.03571 5.08465 5.15861 5.17073 5.35664 5.38049 5.52970 5.59841 5.69378 5.76839 6.01811 6.39813 6.60677 6.88283 7.34670 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.086 4.086 3 Si 0.772 3.228 4 C -0.126 4.126 5 C -0.107 4.107 6 C -0.115 4.115 7 C -0.065 4.065 8 C -0.099 4.099 9 C 0.514 3.486 10 O -0.559 6.559 11 N -0.693 5.693 12 C 0.190 3.810 13 C -0.050 4.050 14 C -0.099 4.099 15 C -0.101 4.101 16 C -0.107 4.107 17 Br -0.060 7.060 18 C -0.097 4.097 19 C -0.113 4.113 20 C -0.120 4.120 21 C 0.090 3.910 22 H 0.091 0.909 23 O -0.560 6.560 24 C -0.173 4.173 25 C -0.109 4.109 26 C -0.123 4.123 27 H 0.383 0.617 28 H 0.125 0.875 29 H -0.289 1.289 30 H -0.301 1.301 31 H 0.121 0.879 32 H 0.129 0.871 33 H 0.125 0.875 34 H 0.129 0.871 35 H 0.417 0.583 36 H 0.128 0.872 37 H 0.132 0.868 38 H 0.143 0.857 39 H 0.154 0.846 40 H 0.091 0.909 41 H 0.121 0.879 42 H 0.397 0.603 43 H 0.107 0.893 44 H 0.063 0.937 45 H 0.140 0.860 46 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.929 -0.724 -5.696 10.616 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.195 4.195 3 Si 0.678 3.322 4 C -0.126 4.126 5 C -0.125 4.125 6 C -0.133 4.133 7 C -0.066 4.066 8 C -0.138 4.138 9 C 0.302 3.698 10 O -0.436 6.436 11 N -0.345 5.345 12 C 0.102 3.898 13 C -0.051 4.051 14 C -0.118 4.118 15 C -0.121 4.121 16 C -0.186 4.186 17 Br 0.025 6.975 18 C -0.117 4.117 19 C -0.132 4.132 20 C -0.158 4.158 21 C 0.031 3.969 22 H 0.109 0.891 23 O -0.368 6.368 24 C -0.212 4.212 25 C -0.127 4.127 26 C -0.140 4.140 27 H 0.232 0.768 28 H 0.143 0.857 29 H -0.216 1.216 30 H -0.229 1.229 31 H 0.139 0.861 32 H 0.147 0.853 33 H 0.143 0.857 34 H 0.147 0.853 35 H 0.255 0.745 36 H 0.146 0.854 37 H 0.150 0.850 38 H 0.160 0.840 39 H 0.171 0.829 40 H 0.110 0.890 41 H 0.139 0.861 42 H 0.247 0.753 43 H 0.125 0.875 44 H 0.081 0.919 45 H 0.158 0.842 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 7.294 -0.527 -4.691 8.688 hybrid contribution -0.822 0.232 -0.373 0.932 sum 6.472 -0.294 -5.064 8.223 Atomic orbital electron populations 1.86550 1.18860 1.80398 1.50001 1.25295 0.83223 1.12070 0.98876 0.94127 0.90176 0.71858 0.76048 1.20313 0.99744 0.95195 0.97345 1.21058 0.99244 0.94341 0.97894 1.21196 0.97331 1.00572 0.94200 1.19523 0.97491 0.94377 0.95174 1.20745 0.99038 1.04161 0.89894 1.20885 0.86912 0.78382 0.83650 1.90782 1.28758 1.41392 1.82655 1.45523 1.28599 1.51881 1.08532 1.19986 0.85266 0.97500 0.87008 1.20015 0.95279 0.94781 0.95064 1.20952 0.95682 0.97804 0.97384 1.21201 0.92197 0.99588 0.99119 1.21913 0.90723 1.03394 1.02610 1.96729 1.13186 1.93286 1.94303 1.21291 0.98170 0.96048 0.96184 1.21235 0.91059 1.00046 1.00861 1.23457 1.00298 0.97966 0.94057 1.22624 0.82033 0.96023 0.96219 0.89094 1.86363 1.26125 1.41978 1.82312 1.24209 1.01381 0.95957 0.99623 1.21194 1.00121 0.94077 0.97306 1.21147 0.98192 1.00046 0.94621 0.76768 0.85738 1.21621 1.22945 0.86137 0.85300 0.85738 0.85283 0.74478 0.85429 0.85002 0.83957 0.82895 0.89021 0.86064 0.75253 0.87452 0.91854 0.84214 0.84293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.78 12.77 -148.98 -1.90 -5.68 16 2 C -0.09 -0.25 2.82 71.23 0.20 -0.05 16 3 Si 0.77 0.57 29.79 68.60 2.04 2.61 16 4 C -0.13 -0.48 5.39 -19.87 -0.11 -0.59 16 5 C -0.11 -0.54 9.61 22.27 0.21 -0.33 16 6 C -0.11 -0.37 9.70 22.27 0.22 -0.16 16 7 C -0.07 -0.08 4.37 -19.87 -0.09 -0.17 16 8 C -0.10 0.47 5.83 29.10 0.17 0.64 16 9 C 0.51 0.21 6.62 87.66 0.58 0.79 16 10 O -0.56 -5.40 14.34 -3.03 -0.04 -5.45 16 11 N -0.69 2.74 4.03 -423.92 -1.71 1.03 16 12 C 0.19 -0.52 0.95 3.39 0.00 -0.52 16 13 C -0.05 -0.09 4.10 -19.86 -0.08 -0.18 16 14 C -0.10 -0.40 8.18 22.27 0.18 -0.21 16 15 C -0.10 -0.60 9.79 22.28 0.22 -0.38 16 16 C -0.11 -0.69 6.22 22.31 0.14 -0.55 16 17 Br -0.06 -0.39 33.70 -20.37 -0.69 -1.08 16 18 C -0.10 -0.38 9.79 22.29 0.22 -0.16 16 19 C -0.11 -0.17 9.24 22.27 0.21 0.04 16 20 C -0.12 0.82 7.15 31.12 0.22 1.04 16 21 C 0.09 -0.68 5.28 31.12 0.16 -0.51 16 22 H 0.09 -0.93 8.14 -2.38 -0.02 -0.95 16 23 O -0.56 3.98 13.08 -148.98 -1.95 2.03 16 24 C -0.17 0.64 6.98 31.12 0.22 0.86 16 25 C -0.11 -0.14 9.70 22.27 0.22 0.08 16 26 C -0.12 -0.25 8.67 22.27 0.19 -0.05 16 27 H 0.38 0.94 8.70 -74.06 -0.64 0.30 16 28 H 0.12 0.11 7.96 -2.39 -0.02 0.09 16 29 H -0.29 -1.55 7.11 99.48 0.71 -0.84 16 30 H -0.30 -2.39 7.11 99.48 0.71 -1.68 16 31 H 0.12 0.59 8.06 -2.91 -0.02 0.56 16 32 H 0.13 0.06 8.06 -2.91 -0.02 0.04 16 33 H 0.12 -1.13 8.09 -2.39 -0.02 -1.15 16 34 H 0.13 -1.20 8.08 -2.39 -0.02 -1.22 16 35 H 0.42 -3.39 8.63 -92.70 -0.80 -4.19 16 36 H 0.13 0.23 7.03 -2.91 -0.02 0.21 16 37 H 0.13 0.56 8.06 -2.91 -0.02 0.53 16 38 H 0.14 0.15 8.06 -2.91 -0.02 0.12 16 39 H 0.15 -0.58 5.96 -2.91 -0.02 -0.60 16 40 H 0.09 -0.66 8.10 -2.39 -0.02 -0.67 16 41 H 0.12 -1.04 8.09 -2.39 -0.02 -1.06 16 42 H 0.40 -5.19 9.12 -74.05 -0.68 -5.87 16 43 H 0.11 -0.57 5.80 -2.39 -0.01 -0.58 16 44 H 0.06 0.02 8.14 -2.39 -0.02 0.01 16 45 H 0.14 -0.40 8.06 -2.91 -0.02 -0.42 16 46 H 0.14 -0.25 4.88 -2.91 -0.01 -0.26 16 Total: 0.00 -22.40 399.33 -2.19 -24.59 By element: Atomic # 1 Polarization: -16.62 SS G_CDS: -1.02 Total: -17.65 kcal Atomic # 6 Polarization: -3.50 SS G_CDS: 3.09 Total: -0.41 kcal Atomic # 7 Polarization: 2.74 SS G_CDS: -1.71 Total: 1.03 kcal Atomic # 8 Polarization: -5.20 SS G_CDS: -3.89 Total: -9.10 kcal Atomic # 14 Polarization: 0.57 SS G_CDS: 2.04 Total: 2.61 kcal Atomic # 35 Polarization: -0.39 SS G_CDS: -0.69 Total: -1.08 kcal Total: -22.40 -2.19 -24.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12335836.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.724 kcal (2) G-P(sol) polarization free energy of solvation -22.405 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.681 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.590 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.866 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds