Wall clock time and date at job start Sat Mar 6 2021 23:41:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86305 * 109.47014 * 2 1 4 4 C 1.50703 * 109.46990 * 119.99727 * 2 1 3 5 5 C 1.34455 * 126.48169 * 254.68752 * 4 2 1 6 6 N 1.36558 * 109.98272 * 179.86633 * 5 4 2 7 7 C 1.37825 * 109.86107 * 0.41357 * 6 5 4 8 8 C 1.38648 * 133.38227 * 179.76152 * 7 6 5 9 9 C 1.39318 * 119.66800 * 180.02562 * 8 7 6 10 10 C 1.47584 * 119.83130 * 179.97438 * 9 8 7 11 11 O 1.21583 * 120.00110 * 359.97400 * 10 9 8 12 12 N 1.34776 * 119.99763 * 179.97438 * 10 9 8 13 13 C 1.46492 * 119.99772 * 175.03152 * 12 10 9 14 14 C 1.50706 * 112.85366 * 65.09276 * 13 12 10 15 15 C 1.38238 * 119.99109 * 197.54737 * 14 13 12 16 16 C 1.38217 * 120.00979 * 179.76335 * 15 14 13 17 17 C 1.38325 * 119.98693 * 0.51377 * 16 15 14 18 18 Br 1.89101 * 120.00704 * 179.76701 * 17 16 15 19 19 C 1.38322 * 119.98172 * 359.73828 * 17 16 15 20 20 C 1.38220 * 119.98955 * 0.02562 * 19 17 16 21 21 C 1.53780 * 113.61648 * 293.89093 * 13 12 10 22 22 C 1.53776 * 87.08326 * 270.88869 * 21 13 12 23 23 H 1.09006 * 113.61199 * 220.01292 * 22 21 13 24 24 O 1.42901 * 113.61560 * 89.19746 * 22 21 13 25 25 C 1.53784 * 113.61290 * 196.28687 * 13 12 10 26 26 C 1.40195 * 120.33509 * 359.94759 * 9 8 7 27 27 C 1.36228 * 120.38155 * 0.04950 * 26 9 8 28 28 C 1.39885 * 119.95563 * 359.97438 * 27 26 9 29 29 H 0.96705 * 113.99991 * 60.00342 * 1 2 3 30 30 H 1.09000 * 109.47366 * 239.99737 * 2 1 3 31 31 H 1.48502 * 109.99769 * 298.67459 * 3 2 1 32 32 H 1.48497 * 110.00148 * 59.99882 * 3 2 1 33 33 H 1.07998 * 125.00311 * 0.02610 * 5 4 2 34 34 H 0.97002 * 125.07095 * 180.17040 * 6 5 4 35 35 H 1.08006 * 120.16735 * 359.97132 * 8 7 6 36 36 H 0.97001 * 119.99914 * 355.02670 * 12 10 9 37 37 H 1.08004 * 119.99481 * 0.02562 * 15 14 13 38 38 H 1.08005 * 120.00629 * 180.27591 * 16 15 14 39 39 H 1.07999 * 120.00364 * 179.97438 * 19 17 16 40 40 H 1.07993 * 119.99517 * 179.97438 * 20 19 17 41 41 H 1.09009 * 113.60822 * 25.43953 * 21 13 12 42 42 H 1.09005 * 113.61660 * 156.25119 * 21 13 12 43 43 H 0.96701 * 113.99831 * 179.97438 * 24 22 21 44 44 H 1.08998 * 113.61585 * 203.65952 * 25 13 12 45 45 H 1.08994 * 113.61635 * 334.56389 * 25 13 12 46 46 H 1.08004 * 119.81278 * 180.02562 * 26 9 8 47 47 H 1.08001 * 120.02621 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4669 -0.1366 2.3222 6 7 2.8040 -1.0946 3.2351 7 6 2.4950 -2.3430 2.7395 8 6 2.6315 -3.6278 3.2425 9 6 2.2139 -4.7154 2.4786 10 6 2.3579 -6.0846 3.0102 11 8 2.8405 -6.2612 4.1121 12 7 1.9545 -7.1392 2.2743 13 6 2.1962 -8.5022 2.7536 14 6 1.4393 -8.8211 4.0171 15 6 1.8167 -9.8996 4.7952 16 6 1.1258 -10.1896 5.9567 17 6 0.0500 -9.4067 6.3349 18 35 -0.8997 -9.8068 7.9204 19 6 -0.3306 -8.3308 5.5533 20 6 0.3640 -8.0387 4.3945 21 6 3.6861 -8.8780 2.8165 22 6 3.5458 -9.3572 1.3621 23 1 4.0877 -10.2794 1.1520 24 8 3.7957 -8.3345 0.3958 25 6 2.0503 -9.5744 1.6609 26 6 1.6569 -4.5158 1.2076 27 6 1.5191 -3.2568 0.7057 28 6 1.9342 -2.1547 1.4606 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 1.5879 2.4585 -1.2243 32 1 1.5614 2.4680 1.2084 33 1 2.6072 0.9256 2.4581 34 1 3.2047 -0.9224 4.1015 35 1 3.0602 -3.7848 4.2214 36 1 1.5042 -6.9956 1.4272 37 1 2.6542 -10.5132 4.4976 38 1 1.4236 -11.0296 6.5668 39 1 -1.1708 -7.7195 5.8480 40 1 0.0667 -7.1989 3.7840 41 1 4.3483 -8.0198 2.9316 42 1 3.9049 -9.6792 3.5225 43 1 3.7094 -8.6300 -0.5209 44 1 1.8225 -10.5666 2.0503 45 1 1.3928 -9.2782 0.8436 46 1 1.3356 -5.3650 0.6227 47 1 1.0897 -3.1097 -0.2743 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12335838.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:41:58 Heat of formation + Delta-G solvation = 22.223677 kcal Electronic energy + Delta-G solvation = -34606.124357 eV Core-core repulsion = 29961.612668 eV Total energy + Delta-G solvation = -4644.511688 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.057 amu Computer time = 1.51 seconds Orbital eigenvalues (eV) -42.51289 -42.07433 -40.06799 -39.38230 -37.88448 -37.50771 -36.24740 -34.13760 -33.35418 -33.16391 -32.02758 -30.78805 -30.64056 -30.16310 -26.99929 -26.51083 -25.87361 -24.47210 -23.77776 -23.62650 -22.44654 -21.50948 -20.59664 -20.28021 -19.28789 -18.63979 -18.44236 -18.32034 -17.77123 -17.30421 -16.97218 -16.43312 -16.21685 -16.07207 -15.86431 -15.74374 -15.46227 -15.18491 -15.01901 -14.99389 -14.77608 -14.71095 -14.59713 -14.36837 -14.32542 -13.84971 -13.71541 -13.35347 -13.15527 -13.00575 -12.66009 -12.61106 -12.55670 -12.38343 -12.23485 -12.18174 -11.86558 -11.69546 -11.42005 -11.32332 -10.98371 -10.88369 -10.76508 -10.32903 -10.10136 -10.05854 -9.55166 -9.35698 -8.79678 -4.85115 -0.30639 0.00798 0.27363 0.38689 0.59422 1.35566 1.39663 1.65430 1.86803 1.92119 2.01706 2.21652 2.50458 2.87710 3.15240 3.44928 3.52772 3.56079 3.62526 3.66961 3.72079 3.74224 3.80186 3.87732 3.93479 4.04835 4.11439 4.26178 4.28999 4.36720 4.38056 4.41996 4.54265 4.59759 4.60753 4.69620 4.78668 4.83808 4.86143 4.90047 4.97907 4.98699 5.03178 5.15038 5.16703 5.23394 5.33427 5.41905 5.50086 5.61366 5.65556 5.75810 5.98366 6.49907 6.51230 6.71091 6.97175 7.20472 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.050 4.050 3 Si 0.769 3.231 4 C -0.189 4.189 5 C 0.087 3.913 6 N -0.578 5.578 7 C 0.067 3.933 8 C -0.069 4.069 9 C -0.133 4.133 10 C 0.566 3.434 11 O -0.566 6.566 12 N -0.683 5.683 13 C 0.187 3.813 14 C -0.057 4.057 15 C -0.109 4.109 16 C -0.093 4.093 17 C -0.106 4.106 18 Br -0.058 7.058 19 C -0.101 4.101 20 C -0.107 4.107 21 C -0.140 4.140 22 C 0.089 3.911 23 H 0.096 0.904 24 O -0.564 6.564 25 C -0.147 4.147 26 C -0.105 4.105 27 C -0.081 4.081 28 C -0.082 4.082 29 H 0.391 0.609 30 H 0.084 0.916 31 H -0.289 1.289 32 H -0.287 1.287 33 H 0.203 0.797 34 H 0.434 0.566 35 H 0.126 0.874 36 H 0.415 0.585 37 H 0.159 0.841 38 H 0.148 0.852 39 H 0.132 0.868 40 H 0.122 0.878 41 H 0.053 0.947 42 H 0.120 0.880 43 H 0.398 0.602 44 H 0.122 0.878 45 H 0.098 0.902 46 H 0.151 0.849 47 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.714 -0.440 -7.809 8.279 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.159 4.159 3 Si 0.673 3.327 4 C -0.196 4.196 5 C -0.043 4.043 6 N -0.181 5.181 7 C -0.040 4.040 8 C -0.091 4.091 9 C -0.138 4.138 10 C 0.355 3.645 11 O -0.446 6.446 12 N -0.335 5.335 13 C 0.100 3.900 14 C -0.059 4.059 15 C -0.127 4.127 16 C -0.113 4.113 17 C -0.186 4.186 18 Br 0.028 6.972 19 C -0.121 4.121 20 C -0.126 4.126 21 C -0.178 4.178 22 C 0.030 3.970 23 H 0.114 0.886 24 O -0.372 6.372 25 C -0.185 4.185 26 C -0.124 4.124 27 C -0.100 4.100 28 C -0.087 4.087 29 H 0.241 0.759 30 H 0.102 0.898 31 H -0.216 1.216 32 H -0.214 1.214 33 H 0.219 0.781 34 H 0.274 0.726 35 H 0.143 0.857 36 H 0.253 0.747 37 H 0.176 0.824 38 H 0.165 0.835 39 H 0.150 0.850 40 H 0.140 0.860 41 H 0.072 0.928 42 H 0.138 0.862 43 H 0.249 0.751 44 H 0.140 0.860 45 H 0.116 0.884 46 H 0.169 0.831 47 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 2.745 0.182 -5.257 5.933 hybrid contribution -1.235 0.127 -0.802 1.478 sum 1.509 0.309 -6.058 6.251 Atomic orbital electron populations 1.86594 1.19213 1.80604 1.50719 1.24310 0.83346 1.11278 0.96933 0.94208 0.90061 0.71417 0.77035 1.19798 1.10504 0.91101 0.98202 1.22188 0.98445 0.95412 0.88215 1.41762 1.54453 1.03380 1.18549 1.18130 1.03940 0.86747 0.95154 1.20097 1.00168 0.88787 1.00003 1.19502 1.05767 0.91859 0.96642 1.18248 0.77100 0.85077 0.84114 1.90783 1.45967 1.86594 1.21263 1.45287 1.60235 1.03602 1.24397 1.20078 0.95076 0.82875 0.91968 1.20119 0.94692 0.94768 0.96287 1.21220 1.00266 0.97480 0.93769 1.21326 0.93536 0.99216 0.97177 1.21929 1.00257 1.00935 0.95435 1.96732 1.74578 1.94350 1.31568 1.21196 1.00247 0.96050 0.94557 1.20980 0.95760 0.99466 0.96388 1.23624 0.94832 1.02228 0.97137 1.22710 0.94573 0.91115 0.88633 0.88640 1.86496 1.92783 1.38144 1.19782 1.24079 0.98691 0.98493 0.97224 1.20879 0.99532 0.97995 0.94036 1.20397 0.98919 0.90482 1.00175 1.19548 1.01098 0.94081 0.93961 0.75918 0.89772 1.21634 1.21426 0.78052 0.72622 0.85650 0.74661 0.82386 0.83452 0.85030 0.85965 0.92849 0.86216 0.75109 0.85995 0.88360 0.83128 0.84017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.41 12.86 -148.98 -1.92 -3.33 16 2 C -0.05 0.03 3.05 71.24 0.22 0.25 16 3 Si 0.77 -2.98 30.78 68.60 2.11 -0.87 16 4 C -0.19 -0.54 5.61 -18.64 -0.10 -0.64 16 5 C 0.09 -0.06 10.43 83.09 0.87 0.81 16 6 N -0.58 -0.16 6.07 -187.73 -1.14 -1.30 16 7 C 0.07 0.39 7.26 38.95 0.28 0.67 16 8 C -0.07 -0.53 9.61 22.63 0.22 -0.32 16 9 C -0.13 -0.86 5.87 -20.08 -0.12 -0.98 16 10 C 0.57 4.48 6.33 86.71 0.55 5.03 16 11 O -0.57 -8.65 14.81 -3.98 -0.06 -8.71 16 12 N -0.68 -0.78 3.75 -427.01 -1.60 -2.38 16 13 C 0.19 -0.01 0.92 3.39 0.00 -0.01 16 14 C -0.06 -0.19 4.51 -19.86 -0.09 -0.28 16 15 C -0.11 -0.14 8.94 22.26 0.20 0.05 16 16 C -0.09 -0.32 9.79 22.29 0.22 -0.10 16 17 C -0.11 -0.68 6.22 22.31 0.14 -0.54 16 18 Br -0.06 -0.35 33.70 -20.37 -0.69 -1.04 16 19 C -0.10 -0.69 9.79 22.29 0.22 -0.47 16 20 C -0.11 -0.65 8.64 22.27 0.19 -0.46 16 21 C -0.14 -0.07 6.66 31.12 0.21 0.14 16 22 C 0.09 -0.48 5.28 31.21 0.16 -0.31 16 23 H 0.10 -0.87 8.14 -2.38 -0.02 -0.89 16 24 O -0.56 2.11 13.09 -148.98 -1.95 0.15 16 25 C -0.15 1.03 7.15 31.21 0.22 1.25 16 26 C -0.10 -0.20 9.46 22.28 0.21 0.01 16 27 C -0.08 -0.26 10.03 22.20 0.22 -0.04 16 28 C -0.08 -0.48 6.35 -20.14 -0.13 -0.61 16 29 H 0.39 -2.21 8.74 -74.05 -0.65 -2.85 16 30 H 0.08 -0.30 7.96 -2.39 -0.02 -0.31 16 31 H -0.29 -0.27 7.11 99.48 0.71 0.43 16 32 H -0.29 -0.43 7.05 99.48 0.70 0.27 16 33 H 0.20 -1.42 6.30 -2.91 -0.02 -1.44 16 34 H 0.43 -2.32 8.96 -92.71 -0.83 -3.15 16 35 H 0.13 1.08 7.62 -2.91 -0.02 1.05 16 36 H 0.41 -1.56 6.66 -92.71 -0.62 -2.18 16 37 H 0.16 -0.73 6.29 -2.91 -0.02 -0.75 16 38 H 0.15 -0.01 8.06 -2.91 -0.02 -0.04 16 39 H 0.13 0.71 8.06 -2.91 -0.02 0.69 16 40 H 0.12 0.69 6.89 -2.91 -0.02 0.67 16 41 H 0.05 0.43 7.57 -2.38 -0.02 0.41 16 42 H 0.12 -0.36 6.02 -2.38 -0.01 -0.37 16 43 H 0.40 -4.91 9.12 -74.06 -0.68 -5.59 16 44 H 0.12 -1.15 7.93 -2.39 -0.02 -1.17 16 45 H 0.10 -0.91 8.09 -2.39 -0.02 -0.93 16 46 H 0.15 -0.69 6.37 -2.91 -0.02 -0.71 16 47 H 0.14 -0.05 8.06 -2.91 -0.02 -0.08 16 Total: 0.00 -27.77 407.96 -3.19 -30.96 By element: Atomic # 1 Polarization: -15.29 SS G_CDS: -1.64 Total: -16.93 kcal Atomic # 6 Polarization: -0.25 SS G_CDS: 3.69 Total: 3.44 kcal Atomic # 7 Polarization: -0.94 SS G_CDS: -2.74 Total: -3.68 kcal Atomic # 8 Polarization: -7.96 SS G_CDS: -3.92 Total: -11.88 kcal Atomic # 14 Polarization: -2.98 SS G_CDS: 2.11 Total: -0.87 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -0.69 Total: -1.04 kcal Total: -27.77 -3.19 -30.96 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12335838.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.185 kcal (2) G-P(sol) polarization free energy of solvation -27.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.415 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.962 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds