Wall clock time and date at job start Sat Mar 6 2021 23:42:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.47386 * 2 1 4 4 C 1.50701 * 109.47056 * 119.99798 * 2 1 3 5 5 C 1.37945 * 119.91687 * 64.72244 * 4 2 1 6 6 C 1.39604 * 119.87212 * 179.77004 * 5 4 2 7 7 C 1.47842 * 120.14049 * 180.25837 * 6 5 4 8 8 O 1.21558 * 120.00118 * 0.24612 * 7 6 5 9 9 N 1.34775 * 119.99998 * 180.25179 * 7 6 5 10 10 C 1.46504 * 120.00025 * 174.79215 * 9 7 6 11 11 C 1.50691 * 112.84889 * 76.02743 * 10 9 7 12 12 C 1.38247 * 119.98923 * 184.85743 * 11 10 9 13 13 C 1.38224 * 120.00835 * 179.76776 * 12 11 10 14 14 C 1.38319 * 119.99057 * 0.51161 * 13 12 11 15 15 Br 1.89097 * 120.01231 * 179.76461 * 14 13 12 16 16 C 1.38327 * 119.98105 * 359.74209 * 14 13 12 17 17 C 1.38223 * 119.98700 * 0.02562 * 16 14 13 18 18 C 1.53788 * 113.61270 * 304.83051 * 10 9 7 19 19 C 1.53778 * 87.08078 * 270.88624 * 18 10 9 20 20 H 1.09005 * 113.61186 * 220.02616 * 19 18 10 21 21 O 1.42902 * 113.61608 * 89.20277 * 19 18 10 22 22 C 1.53779 * 113.61496 * 207.33732 * 10 9 7 23 23 C 1.39543 * 119.71606 * 0.50777 * 6 5 4 24 24 C 1.38068 * 119.84571 * 359.74358 * 23 6 5 25 25 Br 1.89099 * 119.93948 * 180.02562 * 24 23 6 26 26 C 1.38362 * 119.92706 * 245.00059 * 4 2 1 27 27 H 0.96705 * 114.00221 * 300.00052 * 1 2 3 28 28 H 1.08990 * 109.47066 * 239.99842 * 2 1 3 29 29 H 1.48495 * 109.99946 * 300.00251 * 3 2 1 30 30 H 1.48511 * 109.99553 * 61.31816 * 3 2 1 31 31 H 1.08000 * 120.06389 * 0.02562 * 5 4 2 32 32 H 0.96999 * 120.00062 * 354.79198 * 9 7 6 33 33 H 1.07998 * 119.99490 * 0.02892 * 12 11 10 34 34 H 1.08000 * 120.00006 * 180.27919 * 13 12 11 35 35 H 1.07998 * 120.00942 * 180.02562 * 16 14 13 36 36 H 1.08004 * 119.99278 * 180.02562 * 17 16 14 37 37 H 1.09002 * 113.61313 * 25.43464 * 18 10 9 38 38 H 1.08998 * 113.61179 * 156.25025 * 18 10 9 39 39 H 0.96701 * 113.99539 * 179.97438 * 21 19 18 40 40 H 1.08999 * 113.61618 * 203.66721 * 22 10 9 41 41 H 1.09004 * 113.61544 * 334.56865 * 22 10 9 42 42 H 1.08001 * 120.07649 * 179.77455 * 23 6 5 43 43 H 1.07998 * 119.85342 * 359.95735 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6793 -2.0561 1.3991 6 6 2.1492 -2.7143 2.5370 7 6 1.8874 -4.1577 2.7210 8 8 1.2657 -4.7749 1.8783 9 7 2.3380 -4.7892 3.8231 10 6 1.9823 -6.1902 4.0615 11 6 2.7619 -7.1471 3.1971 12 6 2.4732 -8.4988 3.2284 13 6 3.1849 -9.3763 2.4321 14 6 4.1931 -8.9033 1.6118 15 35 5.1715 -10.1041 0.5271 16 6 4.4851 -7.5515 1.5847 17 6 3.7697 -6.6741 2.3777 18 6 0.4666 -6.4504 4.0565 19 6 0.4884 -6.1439 5.5633 20 1 -0.1534 -6.7998 6.1515 21 8 0.2981 -4.7610 5.8690 22 6 1.9641 -6.5764 5.5499 23 6 2.8625 -2.0029 3.5026 24 6 3.1036 -0.6551 3.3245 25 35 4.0706 0.3114 4.6309 26 6 2.6392 -0.0101 2.1912 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8899 29 1 1.5615 2.4679 -1.2084 30 1 1.5879 2.4585 1.2243 31 1 1.1231 -2.6003 0.6502 32 1 2.8978 -4.3160 4.4584 33 1 1.6887 -8.8685 3.8720 34 1 2.9562 -10.4316 2.4534 35 1 5.2720 -7.1816 0.9440 36 1 3.9974 -5.6185 2.3563 37 1 -0.0990 -5.7250 3.4715 38 1 0.2013 -7.4815 3.8230 39 1 0.3104 -4.5621 6.8153 40 1 2.1083 -7.6423 5.7262 41 1 2.6074 -5.9528 6.1708 42 1 3.2256 -2.5054 4.3869 43 1 2.8304 1.0442 2.0561 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_12335870.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:42:25 Heat of formation + Delta-G solvation = -8.465793 kcal Electronic energy + Delta-G solvation = -31883.311511 eV Core-core repulsion = 27375.066835 eV Total energy + Delta-G solvation = -4508.244676 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 481.956 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.37814 -41.06968 -39.70750 -39.24050 -37.80373 -36.40531 -34.49073 -33.64920 -33.15461 -32.78148 -31.90151 -30.50307 -30.27581 -27.15576 -27.09414 -26.32591 -24.77495 -23.81483 -22.84858 -22.47776 -21.59484 -20.37998 -19.27612 -18.80110 -18.19969 -17.77627 -17.58892 -17.25924 -16.74217 -16.43801 -16.39600 -16.05932 -15.86918 -15.72287 -15.44547 -15.33212 -14.98716 -14.73338 -14.54990 -14.40388 -14.28129 -14.12533 -13.81575 -13.48966 -13.27105 -13.15730 -13.02830 -12.71600 -12.43639 -12.30123 -12.26977 -11.99257 -11.82064 -11.68929 -11.55117 -11.44699 -11.20642 -11.13950 -10.97480 -10.69507 -10.35064 -10.14447 -10.03268 -9.93975 -9.52560 -5.07273 -0.51012 -0.18905 0.02970 0.29708 0.38400 0.69381 1.12899 1.47739 1.58086 1.82858 1.89367 2.49519 2.49768 2.90011 3.17556 3.23742 3.29659 3.34923 3.43942 3.50506 3.63750 3.70681 3.81638 3.85522 3.88177 3.94556 4.14704 4.18837 4.25841 4.29666 4.37527 4.44356 4.48858 4.54398 4.61207 4.68431 4.73372 4.78605 4.90831 4.91544 4.99412 5.05407 5.15113 5.19541 5.27401 5.37247 5.58413 5.75499 6.28685 6.33362 6.52059 7.10336 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.681 3.319 4 C -0.117 4.117 5 C -0.017 4.017 6 C -0.125 4.125 7 C 0.567 3.433 8 O -0.515 6.515 9 N -0.696 5.696 10 C 0.197 3.803 11 C -0.060 4.060 12 C -0.108 4.108 13 C -0.087 4.087 14 C -0.091 4.091 15 Br -0.050 7.050 16 C -0.087 4.087 17 C -0.095 4.095 18 C -0.128 4.128 19 C 0.080 3.920 20 H 0.076 0.924 21 O -0.544 6.544 22 C -0.163 4.163 23 C -0.051 4.051 24 C -0.094 4.094 25 Br -0.034 7.034 26 C -0.066 4.066 27 H 0.377 0.623 28 H 0.125 0.875 29 H -0.251 1.251 30 H -0.255 1.255 31 H 0.148 0.852 32 H 0.403 0.597 33 H 0.133 0.867 34 H 0.135 0.865 35 H 0.132 0.868 36 H 0.125 0.875 37 H 0.094 0.906 38 H 0.107 0.893 39 H 0.381 0.619 40 H 0.108 0.892 41 H 0.084 0.916 42 H 0.138 0.862 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.115 0.814 5.429 5.883 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.183 4.183 3 Si 0.582 3.418 4 C -0.119 4.119 5 C -0.036 4.036 6 C -0.129 4.129 7 C 0.354 3.646 8 O -0.391 6.391 9 N -0.348 5.348 10 C 0.110 3.890 11 C -0.062 4.062 12 C -0.127 4.127 13 C -0.107 4.107 14 C -0.171 4.171 15 Br 0.036 6.964 16 C -0.107 4.107 17 C -0.114 4.114 18 C -0.165 4.165 19 C 0.020 3.980 20 H 0.094 0.906 21 O -0.350 6.350 22 C -0.201 4.201 23 C -0.071 4.071 24 C -0.174 4.174 25 Br 0.052 6.948 26 C -0.085 4.085 27 H 0.225 0.775 28 H 0.143 0.857 29 H -0.175 1.175 30 H -0.180 1.180 31 H 0.165 0.835 32 H 0.240 0.760 33 H 0.150 0.850 34 H 0.153 0.847 35 H 0.150 0.850 36 H 0.143 0.857 37 H 0.112 0.888 38 H 0.125 0.875 39 H 0.229 0.771 40 H 0.126 0.874 41 H 0.103 0.897 42 H 0.155 0.845 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 2.222 0.862 3.713 4.412 hybrid contribution -1.037 0.065 1.440 1.776 sum 1.185 0.927 5.153 5.368 Atomic orbital electron populations 1.86650 1.17165 1.79893 1.49320 1.25051 0.84340 1.11072 0.97881 0.95051 0.91571 0.74305 0.80900 1.20296 0.99879 0.94516 0.97187 1.21296 0.93602 0.93117 0.95601 1.19946 1.02550 0.93760 0.96670 1.18018 0.79098 0.86140 0.81389 1.90839 1.39510 1.66798 1.41933 1.45339 1.53477 1.11268 1.24714 1.19870 0.94836 0.80151 0.94190 1.19937 0.95657 0.93751 0.96820 1.20884 1.00005 0.92086 0.99703 1.21087 0.94183 1.00484 0.94915 1.21842 1.00086 0.94198 1.00926 1.96774 1.72669 1.60230 1.66768 1.21124 0.99622 0.91275 0.98658 1.20910 0.95200 0.99656 0.95623 1.23478 0.94342 1.03712 0.95002 1.22716 0.94522 0.83501 0.97226 0.90638 1.86527 1.95072 1.23643 1.29720 1.24075 0.98878 1.03387 0.93758 1.21271 0.95397 0.92317 0.98139 1.21629 1.04133 0.95054 0.96567 1.96839 1.72335 1.73642 1.51995 1.21259 0.95265 1.00220 0.91805 0.77487 0.85721 1.17523 1.18019 0.83470 0.76047 0.84960 0.84730 0.84978 0.85749 0.88761 0.87453 0.77132 0.87355 0.89743 0.84465 0.84082 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.42 12.83 -35.23 -0.45 -0.87 16 2 C -0.07 0.06 2.80 36.01 0.10 0.16 16 3 Si 0.68 -1.09 29.87 -169.99 -5.08 -6.16 16 4 C -0.12 0.06 5.35 -104.68 -0.56 -0.50 16 5 C -0.02 -0.01 9.22 -39.18 -0.36 -0.38 16 6 C -0.13 -0.06 5.87 -104.97 -0.62 -0.67 16 7 C 0.57 0.91 6.19 -12.33 -0.08 0.84 16 8 O -0.52 -2.60 14.59 5.31 0.08 -2.52 16 9 N -0.70 0.63 3.62 -48.86 -0.18 0.45 16 10 C 0.20 -0.17 0.97 -132.16 -0.13 -0.30 16 11 C -0.06 -0.02 5.06 -104.62 -0.53 -0.55 16 12 C -0.11 0.03 8.43 -39.58 -0.33 -0.30 16 13 C -0.09 -0.06 9.79 -39.56 -0.39 -0.44 16 14 C -0.09 -0.16 6.22 -39.52 -0.25 -0.41 16 15 Br -0.05 -0.09 33.70 -68.01 -2.29 -2.38 16 16 C -0.09 -0.14 9.79 -39.55 -0.39 -0.52 16 17 C -0.09 -0.12 9.00 -39.59 -0.36 -0.47 16 18 C -0.13 0.02 6.53 -25.92 -0.17 -0.15 16 19 C 0.08 -0.18 5.27 -25.92 -0.14 -0.32 16 20 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 21 O -0.54 0.83 13.09 -35.23 -0.46 0.37 16 22 C -0.16 0.53 7.11 -25.92 -0.18 0.35 16 23 C -0.05 0.06 9.27 -39.16 -0.36 -0.30 16 24 C -0.09 0.07 6.22 -39.58 -0.25 -0.17 16 25 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 26 C -0.07 0.07 8.40 -39.47 -0.33 -0.27 16 27 H 0.38 -0.77 8.70 45.56 0.40 -0.38 16 28 H 0.13 -0.20 7.96 -51.93 -0.41 -0.61 16 29 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 30 H -0.26 -0.02 7.01 56.52 0.40 0.37 16 31 H 0.15 0.27 7.65 -52.49 -0.40 -0.13 16 32 H 0.40 -1.22 6.81 -40.82 -0.28 -1.50 16 33 H 0.13 -0.36 6.74 -52.49 -0.35 -0.71 16 34 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 35 H 0.13 0.07 8.06 -52.49 -0.42 -0.36 16 36 H 0.12 0.09 6.53 -52.48 -0.34 -0.26 16 37 H 0.09 0.29 6.67 -51.93 -0.35 -0.06 16 38 H 0.11 -0.15 6.66 -51.93 -0.35 -0.50 16 39 H 0.38 -2.05 9.12 45.56 0.42 -1.64 16 40 H 0.11 -0.45 7.29 -51.93 -0.38 -0.83 16 41 H 0.08 -0.34 8.13 -51.93 -0.42 -0.76 16 42 H 0.14 -0.45 6.42 -52.49 -0.34 -0.78 16 43 H 0.14 -0.31 4.82 -52.49 -0.25 -0.56 16 LS Contribution 394.77 15.07 5.95 5.95 Total: 0.00 -8.24 394.77 -13.57 -21.81 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -3.53 Total: -9.96 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -5.31 Total: -4.41 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -0.18 Total: 0.45 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -0.84 Total: -3.03 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.08 Total: -6.16 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -4.58 Total: -4.65 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -8.24 -13.57 -21.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12335870.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.342 kcal (2) G-P(sol) polarization free energy of solvation -8.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.103 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.808 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds