Wall clock time and date at job start Sat Mar 6 2021 23:42:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.47386 * 2 1 4 4 C 1.50701 * 109.47056 * 119.99798 * 2 1 3 5 5 C 1.37945 * 119.91687 * 64.72244 * 4 2 1 6 6 C 1.39604 * 119.87212 * 179.77004 * 5 4 2 7 7 C 1.47842 * 120.14049 * 180.25837 * 6 5 4 8 8 O 1.21558 * 120.00118 * 0.24612 * 7 6 5 9 9 N 1.34775 * 119.99998 * 180.25179 * 7 6 5 10 10 C 1.46504 * 120.00025 * 174.79215 * 9 7 6 11 11 C 1.50691 * 112.84889 * 76.02743 * 10 9 7 12 12 C 1.38247 * 119.98923 * 184.85743 * 11 10 9 13 13 C 1.38224 * 120.00835 * 179.76776 * 12 11 10 14 14 C 1.38319 * 119.99057 * 0.51161 * 13 12 11 15 15 Br 1.89097 * 120.01231 * 179.76461 * 14 13 12 16 16 C 1.38327 * 119.98105 * 359.74209 * 14 13 12 17 17 C 1.38223 * 119.98700 * 0.02562 * 16 14 13 18 18 C 1.53788 * 113.61270 * 304.83051 * 10 9 7 19 19 C 1.53778 * 87.08078 * 270.88624 * 18 10 9 20 20 H 1.09005 * 113.61186 * 220.02616 * 19 18 10 21 21 O 1.42902 * 113.61608 * 89.20277 * 19 18 10 22 22 C 1.53779 * 113.61496 * 207.33732 * 10 9 7 23 23 C 1.39543 * 119.71606 * 0.50777 * 6 5 4 24 24 C 1.38068 * 119.84571 * 359.74358 * 23 6 5 25 25 Br 1.89099 * 119.93948 * 180.02562 * 24 23 6 26 26 C 1.38362 * 119.92706 * 245.00059 * 4 2 1 27 27 H 0.96705 * 114.00221 * 300.00052 * 1 2 3 28 28 H 1.08990 * 109.47066 * 239.99842 * 2 1 3 29 29 H 1.48495 * 109.99946 * 300.00251 * 3 2 1 30 30 H 1.48511 * 109.99553 * 61.31816 * 3 2 1 31 31 H 1.08000 * 120.06389 * 0.02562 * 5 4 2 32 32 H 0.96999 * 120.00062 * 354.79198 * 9 7 6 33 33 H 1.07998 * 119.99490 * 0.02892 * 12 11 10 34 34 H 1.08000 * 120.00006 * 180.27919 * 13 12 11 35 35 H 1.07998 * 120.00942 * 180.02562 * 16 14 13 36 36 H 1.08004 * 119.99278 * 180.02562 * 17 16 14 37 37 H 1.09002 * 113.61313 * 25.43464 * 18 10 9 38 38 H 1.08998 * 113.61179 * 156.25025 * 18 10 9 39 39 H 0.96701 * 113.99539 * 179.97438 * 21 19 18 40 40 H 1.08999 * 113.61618 * 203.66721 * 22 10 9 41 41 H 1.09004 * 113.61544 * 334.56865 * 22 10 9 42 42 H 1.08001 * 120.07649 * 179.77455 * 23 6 5 43 43 H 1.07998 * 119.85342 * 359.95735 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6793 -2.0561 1.3991 6 6 2.1492 -2.7143 2.5370 7 6 1.8874 -4.1577 2.7210 8 8 1.2657 -4.7749 1.8783 9 7 2.3380 -4.7892 3.8231 10 6 1.9823 -6.1902 4.0615 11 6 2.7619 -7.1471 3.1971 12 6 2.4732 -8.4988 3.2284 13 6 3.1849 -9.3763 2.4321 14 6 4.1931 -8.9033 1.6118 15 35 5.1715 -10.1041 0.5271 16 6 4.4851 -7.5515 1.5847 17 6 3.7697 -6.6741 2.3777 18 6 0.4666 -6.4504 4.0565 19 6 0.4884 -6.1439 5.5633 20 1 -0.1534 -6.7998 6.1515 21 8 0.2981 -4.7610 5.8690 22 6 1.9641 -6.5764 5.5499 23 6 2.8625 -2.0029 3.5026 24 6 3.1036 -0.6551 3.3245 25 35 4.0706 0.3114 4.6309 26 6 2.6392 -0.0101 2.1912 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8899 29 1 1.5615 2.4679 -1.2084 30 1 1.5879 2.4585 1.2243 31 1 1.1231 -2.6003 0.6502 32 1 2.8978 -4.3160 4.4584 33 1 1.6887 -8.8685 3.8720 34 1 2.9562 -10.4316 2.4534 35 1 5.2720 -7.1816 0.9440 36 1 3.9974 -5.6185 2.3563 37 1 -0.0990 -5.7250 3.4715 38 1 0.2013 -7.4815 3.8230 39 1 0.3104 -4.5621 6.8153 40 1 2.1083 -7.6423 5.7262 41 1 2.6074 -5.9528 6.1708 42 1 3.2256 -2.5054 4.3869 43 1 2.8304 1.0442 2.0561 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12335870.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:42:24 Heat of formation + Delta-G solvation = -6.730593 kcal Electronic energy + Delta-G solvation = -31883.236267 eV Core-core repulsion = 27375.066835 eV Total energy + Delta-G solvation = -4508.169432 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 481.956 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.34303 -41.04216 -39.73779 -39.22175 -37.82011 -36.30883 -34.50612 -33.62625 -33.18049 -32.76544 -31.91025 -30.46402 -30.31803 -27.09291 -26.98060 -26.28858 -24.75212 -23.82655 -22.82789 -22.44232 -21.56988 -20.33663 -19.26563 -18.71599 -18.14984 -17.71773 -17.55825 -17.24325 -16.71079 -16.41156 -16.38429 -16.08598 -15.89278 -15.74647 -15.33914 -15.32069 -14.97917 -14.72480 -14.55095 -14.39047 -14.28448 -14.10396 -13.73527 -13.38614 -13.21071 -13.13281 -13.03826 -12.57974 -12.43035 -12.30585 -12.26905 -11.96202 -11.83009 -11.67162 -11.56546 -11.38362 -11.31523 -11.02653 -10.96790 -10.69805 -10.34856 -10.10288 -10.06336 -9.91052 -9.56877 -4.98481 -0.50566 -0.16100 -0.00749 0.26697 0.43054 0.60532 1.19637 1.53018 1.54780 1.86460 1.93491 2.47694 2.48438 3.11699 3.24254 3.30211 3.41401 3.47739 3.56963 3.60637 3.73684 3.75931 3.85799 3.88432 3.91146 3.96481 4.20109 4.27321 4.30221 4.36857 4.40454 4.53967 4.61578 4.66464 4.75454 4.82168 4.83894 4.87652 4.92351 4.98213 5.01867 5.07894 5.14466 5.16399 5.29762 5.37459 5.60092 5.74751 6.37130 6.40697 6.92111 7.07773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.084 4.084 3 Si 0.764 3.236 4 C -0.113 4.113 5 C -0.030 4.030 6 C -0.134 4.134 7 C 0.565 3.435 8 O -0.558 6.558 9 N -0.683 5.683 10 C 0.189 3.811 11 C -0.063 4.063 12 C -0.106 4.106 13 C -0.093 4.093 14 C -0.106 4.106 15 Br -0.057 7.057 16 C -0.100 4.100 17 C -0.107 4.107 18 C -0.138 4.138 19 C 0.086 3.914 20 H 0.094 0.906 21 O -0.565 6.565 22 C -0.146 4.146 23 C -0.042 4.042 24 C -0.098 4.098 25 Br -0.028 7.028 26 C -0.064 4.064 27 H 0.388 0.612 28 H 0.129 0.871 29 H -0.297 1.297 30 H -0.271 1.271 31 H 0.129 0.871 32 H 0.414 0.586 33 H 0.159 0.841 34 H 0.148 0.852 35 H 0.134 0.866 36 H 0.124 0.876 37 H 0.056 0.944 38 H 0.117 0.883 39 H 0.398 0.602 40 H 0.124 0.876 41 H 0.099 0.901 42 H 0.159 0.841 43 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.653 0.869 7.647 8.141 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.193 4.193 3 Si 0.667 3.333 4 C -0.115 4.115 5 C -0.050 4.050 6 C -0.138 4.138 7 C 0.353 3.647 8 O -0.437 6.437 9 N -0.334 5.334 10 C 0.101 3.899 11 C -0.065 4.065 12 C -0.125 4.125 13 C -0.113 4.113 14 C -0.185 4.185 15 Br 0.028 6.972 16 C -0.119 4.119 17 C -0.126 4.126 18 C -0.176 4.176 19 C 0.027 3.973 20 H 0.112 0.888 21 O -0.373 6.373 22 C -0.184 4.184 23 C -0.062 4.062 24 C -0.178 4.178 25 Br 0.057 6.943 26 C -0.083 4.083 27 H 0.237 0.763 28 H 0.147 0.853 29 H -0.225 1.225 30 H -0.197 1.197 31 H 0.147 0.853 32 H 0.253 0.747 33 H 0.177 0.823 34 H 0.165 0.835 35 H 0.152 0.848 36 H 0.142 0.858 37 H 0.075 0.925 38 H 0.135 0.865 39 H 0.248 0.752 40 H 0.143 0.857 41 H 0.117 0.883 42 H 0.177 0.823 43 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.785 0.906 5.991 6.668 hybrid contribution -1.257 0.087 0.734 1.458 sum 1.528 0.993 6.725 6.967 Atomic orbital electron populations 1.86617 1.18180 1.80387 1.50191 1.25312 0.83704 1.12217 0.98061 0.94135 0.90185 0.71609 0.77336 1.20238 0.99896 0.93893 0.97423 1.21242 0.94213 0.93779 0.95717 1.19905 1.03394 0.93358 0.97154 1.18218 0.78531 0.86530 0.81423 1.90814 1.41616 1.67737 1.43516 1.45253 1.52723 1.11434 1.24011 1.20064 0.94215 0.79715 0.95862 1.20166 0.95264 0.94470 0.96618 1.21181 1.00132 0.91631 0.99572 1.21335 0.93845 1.01405 0.94677 1.21958 1.00806 0.94173 1.01562 1.96749 1.72965 1.60359 1.67129 1.21227 1.00080 0.91523 0.99101 1.21007 0.95846 0.99655 0.96134 1.23559 0.94273 1.03298 0.96470 1.22693 0.95537 0.83557 0.95544 0.88836 1.86487 1.95182 1.24155 1.31505 1.24053 0.98296 1.04575 0.91486 1.21425 0.94352 0.92220 0.98188 1.21722 1.04121 0.95218 0.96706 1.96852 1.72177 1.73506 1.51723 1.21404 0.94644 1.00800 0.91459 0.76301 0.85348 1.22464 1.19739 0.85348 0.74725 0.82308 0.83455 0.84796 0.85827 0.92507 0.86486 0.75196 0.85743 0.88295 0.82316 0.82743 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.58 12.83 -148.98 -1.91 -3.49 16 2 C -0.08 0.07 2.80 71.24 0.20 0.27 16 3 Si 0.76 -2.30 29.87 68.60 2.05 -0.25 16 4 C -0.11 0.04 5.35 -19.90 -0.11 -0.07 16 5 C -0.03 -0.10 9.22 22.53 0.21 0.11 16 6 C -0.13 -0.26 5.87 -20.09 -0.12 -0.38 16 7 C 0.57 2.65 6.19 86.79 0.54 3.19 16 8 O -0.56 -7.10 14.59 -3.90 -0.06 -7.15 16 9 N -0.68 1.09 3.62 -426.76 -1.55 -0.46 16 10 C 0.19 -0.38 0.97 3.38 0.00 -0.37 16 11 C -0.06 -0.06 5.06 -19.87 -0.10 -0.16 16 12 C -0.11 0.12 8.43 22.27 0.19 0.31 16 13 C -0.09 -0.11 9.79 22.29 0.22 0.11 16 14 C -0.11 -0.45 6.22 22.31 0.14 -0.31 16 15 Br -0.06 -0.26 33.70 -20.37 -0.69 -0.94 16 16 C -0.10 -0.43 9.79 22.29 0.22 -0.21 16 17 C -0.11 -0.37 9.00 22.27 0.20 -0.17 16 18 C -0.14 0.01 6.53 31.12 0.20 0.21 16 19 C 0.09 -0.51 5.27 31.12 0.16 -0.34 16 20 H 0.09 -0.87 8.14 -2.38 -0.02 -0.89 16 21 O -0.57 2.24 13.09 -148.98 -1.95 0.29 16 22 C -0.15 1.24 7.11 31.12 0.22 1.46 16 23 C -0.04 0.11 9.27 22.54 0.21 0.32 16 24 C -0.10 0.21 6.22 22.27 0.14 0.35 16 25 Br -0.03 0.08 33.69 -20.37 -0.69 -0.61 16 26 C -0.06 0.15 8.40 22.34 0.19 0.34 16 27 H 0.39 -1.19 8.70 -74.05 -0.64 -1.83 16 28 H 0.13 -0.26 7.96 -2.39 -0.02 -0.28 16 29 H -0.30 -1.43 7.11 99.48 0.71 -0.72 16 30 H -0.27 0.09 7.01 99.48 0.70 0.79 16 31 H 0.13 0.89 7.65 -2.91 -0.02 0.87 16 32 H 0.41 -2.81 6.81 -92.71 -0.63 -3.44 16 33 H 0.16 -1.14 6.74 -2.91 -0.02 -1.16 16 34 H 0.15 -0.30 8.06 -2.91 -0.02 -0.32 16 35 H 0.13 0.37 8.06 -2.91 -0.02 0.34 16 36 H 0.12 0.33 6.53 -2.91 -0.02 0.31 16 37 H 0.06 0.47 6.67 -2.39 -0.02 0.45 16 38 H 0.12 -0.35 6.66 -2.39 -0.02 -0.36 16 39 H 0.40 -4.88 9.12 -74.06 -0.68 -5.56 16 40 H 0.12 -1.41 7.29 -2.39 -0.02 -1.42 16 41 H 0.10 -1.08 8.13 -2.38 -0.02 -1.10 16 42 H 0.16 -1.23 6.42 -2.91 -0.02 -1.25 16 43 H 0.16 -0.83 4.82 -2.91 -0.01 -0.84 16 Total: 0.00 -21.49 394.77 -2.87 -24.36 By element: Atomic # 1 Polarization: -15.61 SS G_CDS: -0.79 Total: -16.40 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: 2.71 Total: 4.65 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -1.55 Total: -0.46 kcal Atomic # 8 Polarization: -6.44 SS G_CDS: -3.92 Total: -10.35 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: 2.05 Total: -0.25 kcal Atomic # 35 Polarization: -0.18 SS G_CDS: -1.37 Total: -1.55 kcal Total: -21.49 -2.87 -24.36 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12335870.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.631 kcal (2) G-P(sol) polarization free energy of solvation -21.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.361 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds