Wall clock time and date at job start Sat Mar 6 2021 23:42:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46798 * 2 1 4 4 C 1.50696 * 109.47156 * 119.99714 * 2 1 3 5 5 C 1.38184 * 119.84348 * 254.98272 * 4 2 1 6 6 C 1.38315 * 120.14693 * 179.74071 * 5 4 2 7 7 F 1.35105 * 120.08360 * 180.27819 * 6 5 4 8 8 C 1.39800 * 119.83305 * 0.55607 * 6 5 4 9 9 C 1.47693 * 120.16028 * 179.71787 * 8 6 5 10 10 O 1.21569 * 119.99638 * 359.72995 * 9 8 6 11 11 N 1.34774 * 120.00218 * 179.72224 * 9 8 6 12 12 C 1.46501 * 119.99865 * 174.77763 * 11 9 8 13 13 C 1.50693 * 112.85061 * 293.05391 * 12 11 9 14 14 C 1.38246 * 119.98919 * 164.72133 * 13 12 11 15 15 C 1.38220 * 120.00578 * 179.77251 * 14 13 12 16 16 C 1.38319 * 119.99365 * 0.50376 * 15 14 13 17 17 Br 1.89101 * 120.01189 * 179.76618 * 16 15 14 18 18 C 1.38330 * 119.97780 * 359.75594 * 16 15 14 19 19 C 1.38208 * 119.99148 * 359.97438 * 18 16 15 20 20 C 1.53791 * 113.61242 * 161.75208 * 12 11 9 21 21 C 1.53785 * 87.07759 * 270.88350 * 20 12 11 22 22 H 1.08998 * 113.61207 * 220.01640 * 21 20 12 23 23 O 1.42900 * 113.69039 * 89.12908 * 21 20 12 24 24 C 1.53782 * 113.61493 * 64.25414 * 12 11 9 25 25 C 1.39663 * 119.68667 * 359.44574 * 8 6 5 26 26 C 1.38072 * 119.85291 * 0.27615 * 25 8 6 27 27 F 1.35094 * 119.91702 * 180.02562 * 26 25 8 28 28 H 0.96694 * 114.00356 * 300.00241 * 1 2 3 29 29 H 1.08994 * 109.47514 * 239.99741 * 2 1 3 30 30 H 1.48505 * 109.99978 * 299.99554 * 3 2 1 31 31 H 1.48498 * 110.00530 * 61.31477 * 3 2 1 32 32 H 1.08003 * 119.93012 * 0.02562 * 5 4 2 33 33 H 0.97001 * 119.99743 * 354.78060 * 11 9 8 34 34 H 1.07998 * 119.99559 * 0.02562 * 14 13 12 35 35 H 1.08006 * 119.99908 * 180.23745 * 15 14 13 36 36 H 1.08002 * 120.00237 * 179.97438 * 18 16 15 37 37 H 1.08000 * 120.00131 * 180.02562 * 19 18 16 38 38 H 1.08997 * 113.61526 * 25.42986 * 20 12 11 39 39 H 1.08997 * 113.60904 * 156.33692 * 20 12 11 40 40 H 0.96697 * 113.99782 * 82.46039 * 23 21 20 41 41 H 1.09001 * 113.61177 * 203.66277 * 24 12 11 42 42 H 1.09001 * 113.61262 * 334.56951 * 24 12 11 43 43 H 1.07998 * 120.07403 * 180.25780 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.4534 0.0199 2.2811 6 6 2.9113 -0.6253 3.4156 7 9 3.4162 0.0903 4.4443 8 6 2.8556 -2.0200 3.4928 9 6 3.3483 -2.7167 4.6983 10 8 3.8082 -2.0775 5.6244 11 7 3.2880 -4.0611 4.7716 12 6 3.8797 -4.7596 5.9154 13 6 5.3818 -4.6459 5.9573 14 6 6.0670 -4.9654 7.1147 15 6 7.4451 -4.8658 7.1521 16 6 8.1378 -4.4363 6.0345 17 35 10.0227 -4.2934 6.0871 18 6 7.4513 -4.1115 4.8783 19 6 6.0738 -4.2168 4.8401 20 6 3.3637 -6.1974 6.0934 21 6 2.2453 -5.6041 6.9663 22 1 2.0123 -6.2049 7.8453 23 8 1.0814 -5.2251 6.2289 24 6 3.1996 -4.4334 7.2555 25 6 2.3267 -2.7512 2.4269 26 6 1.8679 -2.0936 1.3029 27 9 1.3555 -2.7995 0.2713 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5614 2.4679 -1.2086 31 1 1.5877 2.4587 1.2241 32 1 2.4997 1.0971 2.2181 33 1 2.8528 -4.5662 4.0670 34 1 5.5257 -5.2969 7.9885 35 1 7.9805 -5.1191 8.0552 36 1 7.9918 -3.7757 4.0056 37 1 5.5377 -3.9636 3.9373 38 1 3.0032 -6.6494 5.1694 39 1 4.0499 -6.8427 6.6419 40 1 0.4773 -5.9572 6.0439 41 1 3.8409 -4.5965 8.1217 42 1 2.7065 -3.4614 7.2696 43 1 2.2768 -3.8287 2.4816 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12360598.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:42:41 Heat of formation + Delta-G solvation = -94.353260 kcal Electronic energy + Delta-G solvation = -35204.655597 eV Core-core repulsion = 30093.596613 eV Total energy + Delta-G solvation = -5111.058984 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 440.027 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -50.12158 -50.10703 -42.29989 -40.74931 -39.71842 -39.27937 -37.76942 -36.30807 -34.56460 -33.18154 -32.97979 -31.95269 -31.39102 -30.32763 -27.97542 -26.98160 -25.66936 -24.41808 -24.06931 -23.66435 -22.50386 -21.88425 -20.37428 -19.78556 -18.90129 -18.72501 -18.53525 -17.97935 -17.73046 -17.34691 -17.00833 -16.91984 -16.58428 -16.40415 -16.26059 -16.06584 -15.94880 -15.80515 -15.64464 -15.38763 -15.28531 -14.97461 -14.65066 -14.50868 -14.36433 -14.16833 -13.84646 -13.75101 -13.37566 -13.17791 -13.03939 -12.99086 -12.59790 -12.44138 -12.39223 -12.24825 -11.94470 -11.70425 -11.51260 -11.30787 -11.04529 -10.96468 -10.78964 -10.59397 -10.16877 -10.06312 -9.83880 -9.56344 -4.97552 -0.81677 -0.32395 -0.00609 0.26902 0.61009 1.14458 1.40119 1.52775 1.77695 1.89615 2.24322 2.48769 2.77463 2.82953 3.08810 3.12501 3.22985 3.39416 3.44803 3.48359 3.55692 3.63297 3.73258 3.76037 3.87897 3.88265 4.16349 4.26162 4.30604 4.35161 4.37215 4.40510 4.55567 4.60074 4.67516 4.68134 4.71253 4.82096 4.84172 4.87304 4.98112 5.02745 5.13942 5.17006 5.28614 5.36853 5.57984 5.74850 6.32032 6.37290 6.92440 7.02844 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.086 4.086 3 Si 0.771 3.229 4 C -0.091 4.091 5 C -0.131 4.131 6 C 0.139 3.861 7 F -0.125 7.125 8 C -0.147 4.147 9 C 0.561 3.439 10 O -0.545 6.545 11 N -0.680 5.680 12 C 0.189 3.811 13 C -0.062 4.062 14 C -0.107 4.107 15 C -0.093 4.093 16 C -0.106 4.106 17 Br -0.057 7.057 18 C -0.098 4.098 19 C -0.110 4.110 20 C -0.145 4.145 21 C 0.086 3.914 22 H 0.094 0.906 23 O -0.566 6.566 24 C -0.141 4.141 25 C -0.077 4.077 26 C 0.105 3.895 27 F -0.127 7.127 28 H 0.390 0.610 29 H 0.133 0.867 30 H -0.293 1.293 31 H -0.272 1.272 32 H 0.170 0.830 33 H 0.416 0.584 34 H 0.157 0.843 35 H 0.147 0.853 36 H 0.136 0.864 37 H 0.129 0.871 38 H 0.100 0.900 39 H 0.123 0.877 40 H 0.398 0.602 41 H 0.119 0.881 42 H 0.055 0.945 43 H 0.178 0.822 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.735 -5.812 -1.071 6.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.194 4.194 3 Si 0.674 3.326 4 C -0.092 4.092 5 C -0.149 4.149 6 C 0.118 3.882 7 F -0.103 7.103 8 C -0.151 4.151 9 C 0.348 3.652 10 O -0.423 6.423 11 N -0.333 5.333 12 C 0.102 3.898 13 C -0.064 4.064 14 C -0.126 4.126 15 C -0.113 4.113 16 C -0.185 4.185 17 Br 0.028 6.972 18 C -0.118 4.118 19 C -0.129 4.129 20 C -0.182 4.182 21 C 0.026 3.974 22 H 0.112 0.888 23 O -0.374 6.374 24 C -0.179 4.179 25 C -0.096 4.096 26 C 0.086 3.914 27 F -0.105 7.105 28 H 0.240 0.760 29 H 0.151 0.849 30 H -0.220 1.220 31 H -0.198 1.198 32 H 0.187 0.813 33 H 0.255 0.745 34 H 0.175 0.825 35 H 0.164 0.836 36 H 0.154 0.846 37 H 0.147 0.853 38 H 0.118 0.882 39 H 0.141 0.859 40 H 0.249 0.751 41 H 0.137 0.863 42 H 0.074 0.926 43 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -0.543 -4.235 -0.913 4.366 hybrid contribution -1.753 -0.526 0.092 1.833 sum -2.296 -4.761 -0.821 5.349 Atomic orbital electron populations 1.86652 1.17458 1.80398 1.50246 1.25290 0.84186 1.12554 0.97393 0.93845 0.90146 0.71219 0.77391 1.20432 0.98873 0.92582 0.97344 1.21098 1.00366 1.02333 0.91147 1.17805 0.96368 0.88453 0.85585 1.91604 1.84100 1.77591 1.57025 1.19865 1.06237 0.92360 0.96626 1.17971 0.78436 0.82813 0.85955 1.90878 1.45930 1.66588 1.38904 1.45240 1.58219 1.05133 1.24669 1.20061 0.87272 0.95229 0.87267 1.20102 0.95041 0.97271 0.93944 1.21199 0.93293 0.99995 0.98130 1.21329 0.94688 0.97837 0.97438 1.21965 0.90530 1.07870 0.98133 1.96750 1.03929 1.97389 1.99096 1.21237 0.94669 0.98693 0.97181 1.21036 0.93329 0.99415 0.99127 1.24029 0.98709 0.92636 1.02862 1.22698 0.84991 0.95287 0.94375 0.88807 1.86481 1.34043 1.40281 1.76615 1.23616 0.97746 0.99462 0.97035 1.21328 0.95983 1.02251 0.90031 1.17328 0.99106 0.89012 0.85986 1.91570 1.84366 1.78167 1.56417 0.76049 0.84895 1.21996 1.19788 0.81285 0.74488 0.82530 0.83565 0.84572 0.85339 0.88151 0.85862 0.75115 0.86336 0.92609 0.80448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.12 12.88 -148.98 -1.92 -2.04 16 2 C -0.09 0.26 2.44 71.23 0.17 0.43 16 3 Si 0.77 -3.41 30.23 68.60 2.07 -1.34 16 4 C -0.09 0.22 5.27 -19.78 -0.10 0.11 16 5 C -0.13 0.21 8.62 22.28 0.19 0.40 16 6 C 0.14 0.49 7.28 22.67 0.17 0.65 16 7 F -0.13 -1.21 15.55 44.97 0.70 -0.51 16 8 C -0.15 -0.22 5.88 -20.06 -0.12 -0.33 16 9 C 0.56 2.58 6.24 86.74 0.54 3.12 16 10 O -0.55 -7.16 13.82 -3.93 -0.05 -7.22 16 11 N -0.68 1.46 3.73 -426.90 -1.59 -0.13 16 12 C 0.19 -0.45 0.93 3.39 0.00 -0.44 16 13 C -0.06 -0.04 4.79 -19.86 -0.10 -0.14 16 14 C -0.11 0.07 8.82 22.27 0.20 0.27 16 15 C -0.09 -0.14 9.79 22.28 0.22 0.08 16 16 C -0.11 -0.43 6.22 22.31 0.14 -0.30 16 17 Br -0.06 -0.25 33.70 -20.37 -0.69 -0.93 16 18 C -0.10 -0.36 9.79 22.28 0.22 -0.15 16 19 C -0.11 -0.28 8.94 22.26 0.20 -0.08 16 20 C -0.14 1.28 7.13 31.13 0.22 1.51 16 21 C 0.09 -0.55 5.27 31.12 0.16 -0.38 16 22 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 23 O -0.57 2.62 13.09 -148.98 -1.95 0.67 16 24 C -0.14 0.08 6.57 31.12 0.20 0.29 16 25 C -0.08 0.29 9.51 22.57 0.21 0.51 16 26 C 0.11 -0.18 7.23 22.33 0.16 -0.02 16 27 F -0.13 -0.10 16.73 44.97 0.75 0.66 16 28 H 0.39 -2.31 8.70 -74.06 -0.64 -2.95 16 29 H 0.13 -0.56 7.89 -2.39 -0.02 -0.58 16 30 H -0.29 -0.90 7.11 99.48 0.71 -0.19 16 31 H -0.27 0.41 6.68 99.48 0.66 1.08 16 32 H 0.17 -0.77 4.83 -2.91 -0.01 -0.78 16 33 H 0.42 -3.28 6.72 -92.71 -0.62 -3.90 16 34 H 0.16 -0.97 6.42 -2.91 -0.02 -0.99 16 35 H 0.15 -0.23 8.06 -2.91 -0.02 -0.25 16 36 H 0.14 0.24 8.06 -2.91 -0.02 0.22 16 37 H 0.13 0.09 6.77 -2.91 -0.02 0.07 16 38 H 0.10 -1.16 8.09 -2.39 -0.02 -1.18 16 39 H 0.12 -1.38 7.86 -2.39 -0.02 -1.40 16 40 H 0.40 -5.19 9.12 -74.06 -0.68 -5.86 16 41 H 0.12 -0.44 6.12 -2.39 -0.01 -0.46 16 42 H 0.06 0.42 7.10 -2.39 -0.02 0.41 16 43 H 0.18 -1.80 6.42 -2.91 -0.02 -1.82 16 Total: 0.00 -24.09 384.57 -0.78 -24.87 By element: Atomic # 1 Polarization: -18.75 SS G_CDS: -0.80 Total: -19.54 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: 2.70 Total: 5.52 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -1.59 Total: -0.13 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -3.92 Total: -8.59 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 1.45 Total: 0.14 kcal Atomic # 14 Polarization: -3.41 SS G_CDS: 2.07 Total: -1.34 kcal Atomic # 35 Polarization: -0.25 SS G_CDS: -0.69 Total: -0.93 kcal Total: -24.09 -0.78 -24.87 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12360598.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.479 kcal (2) G-P(sol) polarization free energy of solvation -24.093 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.573 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.780 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.874 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.353 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds