Wall clock time and date at job start Sat Mar 6 2021 23:42:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35652 * 117.00253 * 2 1 4 4 C 1.40137 * 120.15274 * 179.97438 * 3 2 1 5 5 C 1.47527 * 120.19127 * 359.97438 * 4 3 2 6 6 O 1.21592 * 119.99971 * 0.02562 * 5 4 3 7 7 N 1.34782 * 120.00247 * 179.97438 * 5 4 3 8 8 C 1.46497 * 120.00124 * 185.05263 * 7 5 4 9 9 C 1.50704 * 112.84705 * 54.66003 * 8 7 5 10 10 C 1.38242 * 119.98669 * 201.43979 * 9 8 7 11 11 C 1.38228 * 120.00372 * 179.76583 * 10 9 8 12 12 C 1.38322 * 119.99096 * 0.51523 * 11 10 9 13 13 Br 1.89097 * 120.00915 * 179.76553 * 12 11 10 14 14 C 1.38329 * 119.97837 * 359.73854 * 12 11 10 15 15 C 1.38214 * 119.99387 * 0.02562 * 14 12 11 16 16 C 1.53774 * 113.61946 * 283.35401 * 8 7 5 17 17 C 1.53782 * 87.07982 * 270.88513 * 16 8 7 18 18 H 1.09002 * 113.61468 * 220.01555 * 17 16 8 19 19 O 1.42899 * 113.61713 * 89.11736 * 17 16 8 20 20 C 1.53775 * 87.08158 * 334.56436 * 17 16 8 21 21 C 1.39709 * 119.61756 * 180.27116 * 4 3 2 22 22 C 1.37799 * 119.90684 * 359.51822 * 21 4 3 23 23 C 1.50701 * 119.84739 * 180.20830 * 22 21 4 24 24 O 1.42901 * 109.47149 * 300.27413 * 23 22 21 25 25 Si 1.86298 * 109.46831 * 180.27730 * 23 22 21 26 26 C 1.38540 * 120.29842 * 0.48404 * 22 21 4 27 27 C 1.38062 * 120.39094 * 359.74473 * 26 22 21 28 28 H 1.08993 * 109.47262 * 300.00514 * 1 2 3 29 29 H 1.09005 * 109.46667 * 60.00128 * 1 2 3 30 30 H 1.08995 * 109.47280 * 179.97438 * 1 2 3 31 31 H 0.97006 * 119.99464 * 5.33685 * 7 5 4 32 32 H 1.07991 * 119.99461 * 0.02616 * 10 9 8 33 33 H 1.07996 * 120.00017 * 180.23142 * 11 10 9 34 34 H 1.07999 * 119.99921 * 179.97438 * 14 12 11 35 35 H 1.07994 * 119.99443 * 180.02562 * 15 14 12 36 36 H 1.09000 * 113.61312 * 25.42881 * 16 8 7 37 37 H 1.08998 * 113.61756 * 156.33609 * 16 8 7 38 38 H 0.96698 * 114.00424 * 82.50121 * 19 17 16 39 39 H 1.08996 * 113.61933 * 270.88631 * 20 17 16 40 40 H 1.09002 * 113.61845 * 139.98006 * 20 17 16 41 41 H 1.07994 * 120.05067 * 179.72413 * 21 4 3 42 42 H 1.08996 * 109.47316 * 60.27491 * 23 22 21 43 43 H 0.96703 * 113.99661 * 300.00606 * 24 23 22 44 44 H 1.48498 * 110.00232 * 180.02562 * 25 23 22 45 45 H 1.48510 * 109.99928 * 301.31846 * 25 23 22 46 46 H 1.08004 * 119.80671 * 179.72092 * 26 22 21 47 47 H 1.08006 * 119.95501 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 3.4441 1.2857 0.0005 5 6 4.2550 0.0532 0.0017 6 8 3.7094 -1.0335 0.0017 7 7 5.6005 0.1317 0.0017 8 6 6.4054 -1.0873 -0.1089 9 6 6.0499 -1.9157 -1.3167 10 6 6.3652 -3.2613 -1.3488 11 6 6.0350 -4.0224 -2.4544 12 6 5.3986 -3.4352 -3.5330 13 35 4.9526 -4.4745 -5.0485 14 6 5.0881 -2.0875 -3.5025 15 6 5.4143 -1.3282 -2.3947 16 6 6.4790 -1.8976 1.1960 17 6 7.7117 -1.0527 1.5587 18 1 8.5093 -1.6251 2.0324 19 8 7.3948 0.1487 2.2645 20 6 7.9158 -0.8447 0.0488 21 6 4.0668 2.5363 0.0063 22 6 3.3038 3.6837 0.0013 23 6 3.9768 5.0321 0.0028 24 8 4.7919 5.1564 1.1700 25 14 2.6826 6.3721 0.0036 26 6 1.9207 3.6034 0.0008 27 6 1.2925 2.3739 -0.0001 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0276 -0.0005 31 1 6.0359 0.9951 0.0791 32 1 6.8657 -3.7187 -0.5083 33 1 6.2779 -5.0744 -2.4778 34 1 4.5917 -1.6286 -4.3447 35 1 5.1715 -0.2762 -2.3707 36 1 5.6287 -1.7362 1.8587 37 1 6.7029 -2.9532 1.0425 38 1 7.2653 0.0243 3.2146 39 1 8.5324 -1.6125 -0.4184 40 1 8.2254 0.1666 -0.2148 41 1 5.1446 2.6038 0.0112 42 1 4.5991 5.1285 -0.8869 43 1 4.3031 5.0804 2.0009 44 1 3.3334 7.7069 0.0044 45 1 1.8084 6.2346 -1.1890 46 1 1.3304 4.5078 0.0014 47 1 0.2138 2.3195 -0.0010 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12496546.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:42:45 Heat of formation + Delta-G solvation = -42.840912 kcal Electronic energy + Delta-G solvation = -34968.491439 eV Core-core repulsion = 30324.354338 eV Total energy + Delta-G solvation = -4644.137101 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.061 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.29455 -41.37612 -39.65957 -39.24927 -39.15377 -37.09855 -36.21817 -34.26039 -33.18274 -32.47791 -31.96065 -31.73481 -30.31424 -28.54822 -26.98328 -26.15395 -26.10338 -24.78573 -23.86173 -22.84326 -22.32744 -21.43978 -20.30644 -19.50174 -18.67346 -18.35204 -18.01611 -17.83196 -17.27994 -16.85960 -16.77808 -16.37424 -16.15648 -16.07314 -15.84984 -15.82377 -15.68343 -15.29338 -15.12780 -14.77115 -14.55575 -14.52705 -14.45777 -14.23879 -13.72006 -13.62282 -13.47619 -13.34935 -13.18242 -13.05618 -12.58213 -12.43643 -12.29778 -12.26983 -12.10125 -12.05551 -11.78609 -11.65298 -11.51465 -11.33689 -10.99343 -10.74266 -10.38840 -10.25063 -10.06894 -10.01855 -9.54974 -9.28223 -4.98697 -0.25824 0.00021 0.21073 0.26167 0.57967 1.33228 1.64046 1.80859 1.98713 2.02278 2.25829 2.49653 2.68963 3.10507 3.44818 3.46669 3.52911 3.57283 3.62379 3.67175 3.75992 3.81037 3.84360 3.85614 4.01584 4.14608 4.23380 4.28660 4.33817 4.35821 4.39662 4.42897 4.55563 4.58948 4.66262 4.68090 4.72439 4.78440 4.83329 4.88465 4.91950 4.98919 5.01385 5.09209 5.14768 5.15312 5.27497 5.33284 5.55784 5.66047 5.74372 6.29825 6.53947 6.80870 6.86671 7.27162 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.012 3.988 2 O -0.311 6.311 3 C 0.172 3.828 4 C -0.195 4.195 5 C 0.560 3.440 6 O -0.544 6.544 7 N -0.692 5.692 8 C 0.188 3.812 9 C -0.052 4.052 10 C -0.109 4.109 11 C -0.093 4.093 12 C -0.105 4.105 13 Br -0.056 7.056 14 C -0.100 4.100 15 C -0.106 4.106 16 C -0.171 4.171 17 C 0.089 3.911 18 H 0.097 0.903 19 O -0.563 6.563 20 C -0.119 4.119 21 C -0.017 4.017 22 C -0.167 4.167 23 C -0.065 4.065 24 O -0.553 6.553 25 Si 0.773 3.227 26 C -0.044 4.044 27 C -0.213 4.213 28 H 0.075 0.925 29 H 0.070 0.930 30 H 0.105 0.895 31 H 0.411 0.589 32 H 0.158 0.842 33 H 0.148 0.852 34 H 0.131 0.869 35 H 0.118 0.882 36 H 0.059 0.941 37 H 0.113 0.887 38 H 0.397 0.603 39 H 0.129 0.871 40 H 0.088 0.912 41 H 0.144 0.856 42 H 0.110 0.890 43 H 0.395 0.605 44 H -0.301 1.301 45 H -0.283 1.283 46 H 0.157 0.843 47 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.019 3.175 5.220 6.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.222 6.222 3 C 0.124 3.876 4 C -0.199 4.199 5 C 0.349 3.651 6 O -0.422 6.422 7 N -0.345 5.345 8 C 0.101 3.899 9 C -0.054 4.054 10 C -0.128 4.128 11 C -0.112 4.112 12 C -0.185 4.185 13 Br 0.029 6.971 14 C -0.119 4.119 15 C -0.126 4.126 16 C -0.209 4.209 17 C 0.030 3.970 18 H 0.115 0.885 19 O -0.371 6.371 20 C -0.157 4.157 21 C -0.036 4.036 22 C -0.168 4.168 23 C -0.176 4.176 24 O -0.361 6.361 25 Si 0.679 3.321 26 C -0.061 4.061 27 C -0.232 4.232 28 H 0.094 0.906 29 H 0.088 0.912 30 H 0.124 0.876 31 H 0.249 0.751 32 H 0.176 0.824 33 H 0.166 0.834 34 H 0.149 0.851 35 H 0.136 0.864 36 H 0.078 0.922 37 H 0.131 0.869 38 H 0.247 0.753 39 H 0.147 0.853 40 H 0.106 0.894 41 H 0.162 0.838 42 H 0.127 0.873 43 H 0.245 0.755 44 H -0.229 1.229 45 H -0.210 1.210 46 H 0.174 0.826 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -0.323 2.808 3.188 4.261 hybrid contribution -0.003 0.064 0.231 0.240 sum -0.326 2.873 3.420 4.478 Atomic orbital electron populations 1.23422 0.76694 1.05325 1.02786 1.86339 1.23017 1.26318 1.86566 1.19377 0.91268 0.85514 0.91488 1.19443 0.91163 0.94078 1.15242 1.18157 0.82282 0.88638 0.76063 1.90837 1.72174 1.29740 1.49422 1.45413 1.04780 1.09518 1.74758 1.20045 0.92350 0.85365 0.92184 1.20007 0.96401 0.94508 0.94443 1.21233 1.00433 0.92539 0.98551 1.21325 0.96865 1.01112 0.91921 1.21908 1.06419 0.95044 0.95093 1.96724 1.92904 1.70041 1.37404 1.21161 0.99266 0.92400 0.99121 1.20930 0.98562 0.99907 0.93154 1.24203 0.99886 1.00630 0.96198 1.22678 0.95429 0.85961 0.92951 0.88518 1.86377 1.92948 1.31646 1.26105 1.23493 0.92059 1.05062 0.95064 1.21065 1.00463 0.89414 0.92636 1.20246 0.93823 0.95967 1.06726 1.25070 1.02036 0.99122 0.91326 1.86478 1.38097 1.95312 1.16254 0.93828 0.77861 0.73948 0.86462 1.21263 0.93644 0.97893 0.93335 1.21474 1.01734 0.90970 1.08975 0.90623 0.91174 0.87637 0.75089 0.82421 0.83403 0.85097 0.86416 0.92242 0.86876 0.75325 0.85334 0.89373 0.83850 0.87261 0.75473 1.22941 1.21000 0.82607 0.82089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.31 -2.72 8.57 -68.75 -0.59 -3.31 16 3 C 0.17 0.97 6.70 22.84 0.15 1.12 16 4 C -0.20 -1.12 5.89 -20.01 -0.12 -1.23 16 5 C 0.56 4.83 6.17 86.69 0.53 5.37 16 6 O -0.54 -8.73 13.79 16.91 0.23 -8.50 16 7 N -0.69 -1.96 4.00 -427.06 -1.71 -3.67 16 8 C 0.19 0.26 0.93 3.38 0.00 0.27 16 9 C -0.05 -0.25 4.27 -19.86 -0.08 -0.33 16 10 C -0.11 -0.28 9.13 22.27 0.20 -0.07 16 11 C -0.09 -0.40 9.79 22.29 0.22 -0.18 16 12 C -0.11 -0.76 6.22 22.31 0.14 -0.62 16 13 Br -0.06 -0.37 33.70 -20.37 -0.69 -1.05 16 14 C -0.10 -0.79 9.79 22.29 0.22 -0.57 16 15 C -0.11 -0.80 8.32 22.27 0.19 -0.62 16 16 C -0.17 0.05 6.87 31.12 0.21 0.26 16 17 C 0.09 -0.39 5.28 31.12 0.16 -0.22 16 18 H 0.10 -0.80 8.14 -2.39 -0.02 -0.82 16 19 O -0.56 1.55 13.06 -148.98 -1.95 -0.40 16 20 C -0.12 0.45 7.13 31.12 0.22 0.67 16 21 C -0.02 -0.01 9.08 22.52 0.20 0.19 16 22 C -0.17 0.31 5.39 -19.90 -0.11 0.21 16 23 C -0.07 0.21 2.82 71.24 0.20 0.41 16 24 O -0.55 1.42 12.76 -148.98 -1.90 -0.48 16 25 Si 0.77 -3.53 29.77 68.60 2.04 -1.49 16 26 C -0.04 0.15 8.66 22.30 0.19 0.34 16 27 C -0.21 0.18 9.03 22.34 0.20 0.39 16 28 H 0.08 -0.35 7.66 -2.39 -0.02 -0.37 16 29 H 0.07 -0.26 7.66 -2.38 -0.02 -0.28 16 30 H 0.11 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.41 -0.11 6.65 -92.70 -0.62 -0.72 16 32 H 0.16 -0.53 6.10 -2.92 -0.02 -0.55 16 33 H 0.15 0.10 8.06 -2.91 -0.02 0.07 16 34 H 0.13 0.82 8.06 -2.91 -0.02 0.80 16 35 H 0.12 0.88 6.79 -2.91 -0.02 0.86 16 36 H 0.06 0.31 8.14 -2.39 -0.02 0.29 16 37 H 0.11 -0.37 5.89 -2.39 -0.01 -0.38 16 38 H 0.40 -3.52 9.12 -74.06 -0.68 -4.20 16 39 H 0.13 -0.89 8.05 -2.39 -0.02 -0.91 16 40 H 0.09 -0.31 8.10 -2.39 -0.02 -0.33 16 41 H 0.14 -0.27 6.42 -2.91 -0.02 -0.28 16 42 H 0.11 -0.25 7.96 -2.39 -0.02 -0.26 16 43 H 0.40 -4.02 8.70 -74.06 -0.64 -4.67 16 44 H -0.30 -1.08 7.11 99.48 0.71 -0.37 16 45 H -0.28 0.06 7.11 99.48 0.71 0.77 16 46 H 0.16 -1.33 4.85 -2.91 -0.01 -1.34 16 47 H 0.16 -0.95 6.30 -2.91 -0.02 -0.97 16 Total: 0.00 -24.76 401.91 -1.52 -26.28 By element: Atomic # 1 Polarization: -13.03 SS G_CDS: -0.82 Total: -13.86 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: 3.86 Total: 6.47 kcal Atomic # 7 Polarization: -1.96 SS G_CDS: -1.71 Total: -3.67 kcal Atomic # 8 Polarization: -8.48 SS G_CDS: -4.20 Total: -12.69 kcal Atomic # 14 Polarization: -3.53 SS G_CDS: 2.04 Total: -1.49 kcal Atomic # 35 Polarization: -0.37 SS G_CDS: -0.69 Total: -1.05 kcal Total: -24.76 -1.52 -26.28 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12496546.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.557 kcal (2) G-P(sol) polarization free energy of solvation -24.760 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.524 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.284 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.841 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds