Wall clock time and date at job start Sat Mar 6 2021 23:42:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86296 * 109.46672 * 2 1 4 4 C 1.50696 * 109.47066 * 240.00207 * 2 1 3 5 5 C 1.38638 * 119.94214 * 74.99936 * 4 2 1 6 6 F 1.35095 * 119.88107 * 0.02562 * 5 4 2 7 7 C 1.38678 * 120.23977 * 179.97438 * 5 4 2 8 8 C 1.37814 * 120.11693 * 0.27506 * 7 5 4 9 9 C 1.39669 * 119.88283 * 359.49954 * 8 7 5 10 10 C 1.47722 * 120.12220 * 180.23325 * 9 8 7 11 11 O 1.21565 * 119.99944 * 180.24570 * 10 9 8 12 12 N 1.34776 * 119.99819 * 0.24523 * 10 9 8 13 13 C 1.46500 * 120.00092 * 174.77799 * 12 10 9 14 14 C 1.50704 * 112.84619 * 293.03306 * 13 12 10 15 15 C 1.38243 * 119.98649 * 164.73623 * 14 13 12 16 16 C 1.38222 * 120.00577 * 179.72593 * 15 14 13 17 17 C 1.38327 * 119.99224 * 0.54753 * 16 15 14 18 18 Br 1.89093 * 120.01034 * 179.70334 * 17 16 15 19 19 C 1.38326 * 119.97418 * 359.72509 * 17 16 15 20 20 C 1.38211 * 119.99524 * 0.02562 * 19 17 16 21 21 C 1.53774 * 113.61594 * 161.72632 * 13 12 10 22 22 C 1.53780 * 87.08192 * 270.88422 * 21 13 12 23 23 H 1.09001 * 113.60969 * 220.02292 * 22 21 13 24 24 O 1.42893 * 113.69459 * 89.12818 * 22 21 13 25 25 C 1.53780 * 113.61618 * 64.22670 * 13 12 10 26 26 C 1.37854 * 119.94013 * 255.01959 * 4 2 1 27 27 H 0.96702 * 114.00226 * 59.99989 * 1 2 3 28 28 H 1.08990 * 109.47181 * 119.99923 * 2 1 3 29 29 H 1.48496 * 110.00230 * 59.99953 * 3 2 1 30 30 H 1.48503 * 109.99945 * 181.31949 * 3 2 1 31 31 H 1.08000 * 119.94042 * 179.97438 * 7 5 4 32 32 H 1.08004 * 120.05852 * 179.74349 * 8 7 5 33 33 H 0.97000 * 119.99890 * 354.77417 * 12 10 9 34 34 H 1.07993 * 119.99805 * 359.97118 * 15 14 13 35 35 H 1.08005 * 120.00265 * 180.24284 * 16 15 14 36 36 H 1.08009 * 120.00179 * 179.97438 * 19 17 16 37 37 H 1.07999 * 120.00007 * 179.97438 * 20 19 17 38 38 H 1.09006 * 113.61645 * 25.43568 * 21 13 12 39 39 H 1.09003 * 113.61342 * 156.33512 * 21 13 12 40 40 H 0.96706 * 113.99861 * 82.46186 * 24 22 21 41 41 H 1.08994 * 113.61645 * 203.66703 * 25 13 12 42 42 H 1.09006 * 113.61209 * 334.56970 * 25 13 12 43 43 H 1.07994 * 120.06077 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.8688 -0.0834 -2.4654 6 9 1.3580 1.1635 -2.5621 7 6 2.3298 -0.7312 -3.6016 8 6 2.8477 -2.0050 -3.5093 9 6 2.9174 -2.6395 -2.2670 10 6 3.4762 -4.0028 -2.1613 11 8 3.5317 -4.5547 -1.0795 12 7 3.9245 -4.6347 -3.2641 13 6 4.5826 -5.9382 -3.1449 14 6 5.9084 -5.8613 -2.4324 15 6 6.5059 -7.0142 -1.9583 16 6 7.7246 -6.9448 -1.3098 17 6 8.3409 -5.7203 -1.1253 18 35 10.0041 -5.6238 -0.2308 19 6 7.7399 -4.5663 -1.5949 20 6 6.5237 -4.6372 -2.2478 21 6 4.6354 -6.7246 -4.4652 22 6 3.2714 -7.3180 -4.0751 23 1 3.1724 -8.3774 -4.3117 24 8 2.1583 -6.5427 -4.5242 25 6 3.6605 -7.0475 -2.6121 26 6 2.4518 -1.9826 -1.1262 27 1 -0.3934 0.4417 -0.7650 28 1 1.7923 -0.5138 0.8899 29 1 1.5613 2.4679 1.2084 30 1 3.5345 1.7704 -0.0321 31 1 2.2784 -0.2384 -4.5613 32 1 3.2026 -2.5102 -4.3955 33 1 3.8114 -4.2265 -4.1367 34 1 6.0224 -7.9697 -2.0981 35 1 8.1932 -7.8461 -0.9429 36 1 8.2205 -3.6099 -1.4507 37 1 6.0542 -3.7362 -2.6141 38 1 4.5988 -6.0920 -5.3521 39 1 5.4376 -7.4617 -4.5026 40 1 1.9089 -6.7085 -5.4437 41 1 4.1961 -7.8727 -2.1429 42 1 2.8367 -6.6753 -2.0029 43 1 2.5001 -2.4701 -0.1637 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_12496548.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:42:50 Heat of formation + Delta-G solvation = -55.831494 kcal Electronic energy + Delta-G solvation = -32312.363833 eV Core-core repulsion = 27672.429254 eV Total energy + Delta-G solvation = -4639.934579 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.036 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -50.36410 -42.29728 -40.78886 -39.63304 -39.14236 -37.70289 -36.29132 -34.42189 -33.19506 -32.80393 -32.11832 -31.68791 -30.32531 -27.08189 -26.97292 -26.08831 -24.62020 -23.84274 -23.52898 -22.46506 -21.54644 -20.35795 -19.29962 -18.76666 -18.54884 -18.12373 -17.84562 -17.58620 -17.01726 -16.92312 -16.46393 -16.29021 -16.11397 -15.89664 -15.62929 -15.44769 -15.33192 -15.07758 -14.78326 -14.59992 -14.47767 -14.37735 -14.23458 -13.99123 -13.76496 -13.41393 -13.32232 -13.05153 -12.91764 -12.59298 -12.50899 -12.42416 -12.27332 -12.00595 -11.71664 -11.50493 -11.34144 -11.02856 -10.94055 -10.70048 -10.20547 -10.13414 -10.09085 -9.85560 -9.58299 -4.94632 -0.52316 -0.02874 -0.01391 0.24164 0.57919 1.13046 1.48653 1.61351 1.82693 1.92690 2.46773 2.54405 2.91446 3.13297 3.24326 3.42449 3.47216 3.51888 3.56366 3.58364 3.65301 3.72353 3.85530 3.87732 3.94037 4.07018 4.23877 4.25159 4.35836 4.40129 4.58346 4.60459 4.67690 4.72966 4.82241 4.83739 4.85868 4.89065 4.97358 4.98756 5.01744 5.06608 5.13408 5.14547 5.28996 5.56813 5.61737 5.72648 6.43193 6.55972 6.95169 7.12828 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.075 4.075 3 Si 0.748 3.252 4 C -0.165 4.165 5 C 0.121 3.879 6 F -0.099 7.099 7 C -0.140 4.140 8 C -0.042 4.042 9 C -0.154 4.154 10 C 0.562 3.438 11 O -0.565 6.565 12 N -0.681 5.681 13 C 0.188 3.812 14 C -0.060 4.060 15 C -0.108 4.108 16 C -0.094 4.094 17 C -0.106 4.106 18 Br -0.058 7.058 19 C -0.100 4.100 20 C -0.110 4.110 21 C -0.144 4.144 22 C 0.087 3.913 23 H 0.093 0.907 24 O -0.564 6.564 25 C -0.142 4.142 26 C -0.033 4.033 27 H 0.393 0.607 28 H 0.109 0.891 29 H -0.286 1.286 30 H -0.285 1.285 31 H 0.183 0.817 32 H 0.174 0.826 33 H 0.417 0.583 34 H 0.157 0.843 35 H 0.146 0.854 36 H 0.134 0.866 37 H 0.130 0.870 38 H 0.102 0.898 39 H 0.121 0.879 40 H 0.399 0.601 41 H 0.116 0.884 42 H 0.054 0.946 43 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.773 -1.276 -11.790 11.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.184 4.184 3 Si 0.652 3.348 4 C -0.166 4.166 5 C 0.101 3.899 6 F -0.078 7.078 7 C -0.158 4.158 8 C -0.060 4.060 9 C -0.158 4.158 10 C 0.351 3.649 11 O -0.444 6.444 12 N -0.333 5.333 13 C 0.101 3.899 14 C -0.062 4.062 15 C -0.127 4.127 16 C -0.113 4.113 17 C -0.186 4.186 18 Br 0.027 6.973 19 C -0.119 4.119 20 C -0.129 4.129 21 C -0.182 4.182 22 C 0.028 3.972 23 H 0.111 0.889 24 O -0.373 6.373 25 C -0.180 4.180 26 C -0.053 4.053 27 H 0.242 0.758 28 H 0.127 0.873 29 H -0.213 1.213 30 H -0.212 1.212 31 H 0.200 0.800 32 H 0.191 0.809 33 H 0.257 0.743 34 H 0.175 0.825 35 H 0.164 0.836 36 H 0.152 0.848 37 H 0.147 0.853 38 H 0.121 0.879 39 H 0.140 0.860 40 H 0.249 0.751 41 H 0.134 0.866 42 H 0.073 0.927 43 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.472 -1.072 -9.148 9.223 hybrid contribution -0.328 -0.297 -0.063 0.447 sum 0.144 -1.369 -9.211 9.313 Atomic orbital electron populations 1.86523 1.16784 1.81982 1.50396 1.25067 0.85501 1.11096 0.96773 0.93902 0.78208 0.76784 0.85893 1.20265 1.04717 0.96366 0.95295 1.17871 0.97312 0.80534 0.94147 1.91188 1.84208 1.37622 1.94752 1.21467 0.99911 0.95543 0.98882 1.21540 0.94200 0.93726 0.96550 1.20016 1.05481 0.94901 0.95353 1.18302 0.77073 0.85482 0.84071 1.90804 1.56694 1.67867 1.29079 1.45238 1.58926 1.19599 1.09554 1.20044 0.88133 0.83498 0.98215 1.20131 0.95391 0.93518 0.97163 1.21212 0.94615 0.99209 0.97652 1.21333 0.95436 0.96552 0.97998 1.21958 0.94743 0.97093 1.04777 1.96747 1.24651 1.99085 1.76776 1.21229 0.95737 0.97612 0.97369 1.21042 0.94536 0.98276 0.99028 1.24016 0.99426 0.99712 0.95017 1.22670 0.85498 0.95191 0.93879 0.88909 1.86487 1.49257 1.66666 1.34875 1.23614 0.99069 0.98386 0.96953 1.20963 0.93068 0.92232 0.98999 0.75763 0.87311 1.21350 1.21176 0.79963 0.80875 0.74336 0.82527 0.83575 0.84800 0.85263 0.87937 0.86050 0.75069 0.86575 0.92719 0.85622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.08 12.88 -148.98 -1.92 -4.00 16 2 C -0.07 -0.24 2.81 71.23 0.20 -0.04 16 3 Si 0.75 1.66 29.57 68.60 2.03 3.69 16 4 C -0.17 -0.30 4.78 -19.86 -0.09 -0.40 16 5 C 0.12 -0.34 6.63 22.47 0.15 -0.19 16 6 F -0.10 0.48 13.46 44.97 0.61 1.08 16 7 C -0.14 1.02 10.01 22.27 0.22 1.24 16 8 C -0.04 0.28 9.53 22.52 0.21 0.50 16 9 C -0.15 -0.17 5.87 -20.09 -0.12 -0.29 16 10 C 0.56 2.42 6.24 86.75 0.54 2.96 16 11 O -0.57 -7.52 14.83 -3.92 -0.06 -7.57 16 12 N -0.68 1.90 3.73 -426.89 -1.59 0.31 16 13 C 0.19 -0.48 0.93 3.38 0.00 -0.48 16 14 C -0.06 -0.05 4.79 -19.86 -0.10 -0.15 16 15 C -0.11 0.04 8.82 22.27 0.20 0.24 16 16 C -0.09 -0.18 9.79 22.29 0.22 0.04 16 17 C -0.11 -0.49 6.22 22.31 0.14 -0.36 16 18 Br -0.06 -0.29 33.70 -20.37 -0.69 -0.97 16 19 C -0.10 -0.43 9.79 22.28 0.22 -0.21 16 20 C -0.11 -0.31 8.94 22.26 0.20 -0.11 16 21 C -0.14 1.34 7.13 31.12 0.22 1.56 16 22 C 0.09 -0.58 5.27 31.12 0.16 -0.42 16 23 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 24 O -0.56 3.00 13.09 -148.98 -1.95 1.05 16 25 C -0.14 0.07 6.57 31.12 0.20 0.27 16 26 C -0.03 -0.15 9.21 22.52 0.21 0.05 16 27 H 0.39 -1.64 8.41 -74.06 -0.62 -2.26 16 28 H 0.11 0.51 7.77 -2.39 -0.02 0.49 16 29 H -0.29 -2.45 7.11 99.48 0.71 -1.75 16 30 H -0.29 -2.11 7.11 99.48 0.71 -1.40 16 31 H 0.18 -2.50 8.06 -2.91 -0.02 -2.53 16 32 H 0.17 -2.49 6.41 -2.91 -0.02 -2.51 16 33 H 0.42 -3.86 6.72 -92.71 -0.62 -4.48 16 34 H 0.16 -0.92 6.42 -2.91 -0.02 -0.94 16 35 H 0.15 -0.17 8.06 -2.91 -0.02 -0.19 16 36 H 0.13 0.36 8.06 -2.91 -0.02 0.33 16 37 H 0.13 0.12 6.77 -2.91 -0.02 0.10 16 38 H 0.10 -1.28 8.10 -2.38 -0.02 -1.30 16 39 H 0.12 -1.38 7.86 -2.39 -0.02 -1.40 16 40 H 0.40 -5.58 9.12 -74.05 -0.68 -6.25 16 41 H 0.12 -0.39 6.12 -2.39 -0.01 -0.41 16 42 H 0.05 0.43 7.10 -2.38 -0.02 0.41 16 43 H 0.13 1.00 7.58 -2.91 -0.02 0.98 16 Total: 0.00 -24.68 379.49 -1.55 -26.22 By element: Atomic # 1 Polarization: -23.28 SS G_CDS: -0.76 Total: -24.05 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: 2.79 Total: 4.23 kcal Atomic # 7 Polarization: 1.90 SS G_CDS: -1.59 Total: 0.31 kcal Atomic # 8 Polarization: -6.60 SS G_CDS: -3.93 Total: -10.52 kcal Atomic # 9 Polarization: 0.48 SS G_CDS: 0.61 Total: 1.08 kcal Atomic # 14 Polarization: 1.66 SS G_CDS: 2.03 Total: 3.69 kcal Atomic # 35 Polarization: -0.29 SS G_CDS: -0.69 Total: -0.97 kcal Total: -24.68 -1.55 -26.22 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_12496548.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.607 kcal (2) G-P(sol) polarization free energy of solvation -24.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds