Wall clock time and date at job start Sat Mar 6 2021 23:43:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86293 * 109.47282 * 2 1 4 4 C 1.50699 * 109.46942 * 120.00386 * 2 1 3 5 5 C 1.34706 * 125.66694 * 64.98351 * 4 2 1 6 6 C 1.40973 * 107.02605 * 179.78342 * 5 4 2 7 7 C 1.35936 * 106.74150 * 0.40146 * 6 5 4 8 8 C 1.47816 * 125.92719 * 179.85510 * 7 6 5 9 9 C 1.39177 * 120.00218 * 179.72097 * 8 7 6 10 10 C 1.39457 * 119.76032 * 180.25282 * 9 8 7 11 11 C 1.47565 * 120.11931 * 179.74924 * 10 9 8 12 12 O 1.21593 * 120.00082 * 179.97438 * 11 10 9 13 13 N 1.34773 * 120.00365 * 0.02562 * 11 10 9 14 14 C 1.46501 * 120.00385 * 175.02996 * 13 11 10 15 15 C 1.50698 * 112.85112 * 65.08663 * 14 13 11 16 16 C 1.38236 * 119.99146 * 197.56229 * 15 14 13 17 17 C 1.38220 * 120.01292 * 179.72828 * 16 15 14 18 18 C 1.38329 * 119.98824 * 0.54779 * 17 16 15 19 19 Br 1.89100 * 120.01260 * 179.70534 * 18 17 16 20 20 C 1.38328 * 119.97575 * 359.72460 * 18 17 16 21 21 C 1.38221 * 119.99385 * 0.02562 * 20 18 17 22 22 C 1.53783 * 113.60904 * 293.89635 * 14 13 11 23 23 C 1.53785 * 87.08018 * 270.88028 * 22 14 13 24 24 H 1.08999 * 113.61699 * 220.02234 * 23 22 14 25 25 O 1.42901 * 113.61324 * 89.19938 * 23 22 14 26 26 C 1.53773 * 113.61723 * 196.28773 * 14 13 11 27 27 C 1.40212 * 119.75666 * 359.49633 * 10 9 8 28 28 O 1.35653 * 120.00285 * 180.27460 * 27 10 9 29 29 C 1.38817 * 119.99403 * 0.50067 * 27 10 9 30 30 C 1.37767 * 120.24660 * 359.77665 * 29 27 10 31 31 O 1.34344 * 125.66251 * 245.01751 * 4 2 1 32 32 H 0.96696 * 114.00106 * 59.99509 * 1 2 3 33 33 H 1.08999 * 109.46887 * 239.99835 * 2 1 3 34 34 H 1.48507 * 109.99848 * 60.00155 * 3 2 1 35 35 H 1.48501 * 110.00382 * 181.32027 * 3 2 1 36 36 H 1.07992 * 126.48889 * 0.02770 * 5 4 2 37 37 H 1.08001 * 126.62516 * 180.28039 * 6 5 4 38 38 H 1.08001 * 120.11804 * 359.97438 * 9 8 7 39 39 H 0.96998 * 119.99999 * 355.02086 * 13 11 10 40 40 H 1.08005 * 119.99768 * 359.97438 * 16 15 14 41 41 H 1.08002 * 120.00988 * 180.25080 * 17 16 15 42 42 H 1.08000 * 120.00252 * 179.97438 * 20 18 17 43 43 H 1.07996 * 119.99519 * 180.02562 * 21 20 18 44 44 H 1.08995 * 113.61970 * 25.42776 * 22 14 13 45 45 H 1.09008 * 113.61075 * 156.33688 * 22 14 13 46 46 H 0.96698 * 114.00096 * 179.97438 * 25 23 22 47 47 H 1.08997 * 113.61868 * 203.66363 * 26 14 13 48 48 H 1.09009 * 113.61432 * 334.56606 * 26 14 13 49 49 H 0.96699 * 113.99533 * 270.23284 * 28 27 10 50 50 H 1.07996 * 119.87702 * 179.74502 * 29 27 10 51 51 H 1.07991 * 119.88094 * 179.97438 * 30 29 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7568 -2.0167 1.5094 6 6 2.3860 -2.2622 2.7468 7 6 2.9073 -1.0778 3.1628 8 6 3.6571 -0.8528 4.4166 9 6 4.1430 0.4159 4.7189 10 6 4.8543 0.6214 5.9006 11 6 5.3778 1.9621 6.2263 12 8 5.9973 2.1388 7.2575 13 7 5.1683 2.9909 5.3813 14 6 5.5919 4.3429 5.7540 15 6 7.0878 4.4729 5.8827 16 6 7.6320 5.5448 6.5651 17 6 9.0038 5.6615 6.6882 18 6 9.8324 4.7114 6.1187 19 35 11.7094 4.8748 6.2796 20 6 9.2874 3.6419 5.4312 21 6 7.9154 3.5233 5.3130 22 6 4.8181 4.9232 6.9495 23 6 3.8033 5.4650 5.9289 24 1 3.4412 6.4662 6.1625 25 8 2.7480 4.5492 5.6294 26 6 4.9489 5.4475 4.8991 27 6 5.0657 -0.4495 6.7807 28 8 5.7522 -0.2540 7.9343 29 6 4.5766 -1.7107 6.4692 30 6 3.8788 -1.9149 5.2990 31 8 2.6270 -0.1461 2.2316 32 1 -0.3933 0.4417 -0.7650 33 1 1.7923 -0.5139 -0.8900 34 1 1.5615 2.4678 1.2086 35 1 3.5346 1.7703 -0.0322 36 1 1.2370 -2.7400 0.8986 37 1 2.4413 -3.2082 3.2650 38 1 3.9736 1.2374 4.0385 39 1 4.7372 2.8362 4.5263 40 1 6.9852 6.2892 7.0055 41 1 9.4289 6.4968 7.2248 42 1 9.9339 2.9001 4.9860 43 1 7.4899 2.6882 4.7766 44 1 4.4061 4.1632 7.6135 45 1 5.3602 5.7041 7.4830 46 1 2.1064 4.8844 4.9884 47 1 5.5266 6.3715 4.8729 48 1 4.6425 5.1106 3.9087 49 1 6.7064 -0.3871 7.8515 50 1 4.7440 -2.5351 7.1465 51 1 3.5012 -2.8986 5.0624 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_13259648.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:43:42 Heat of formation + Delta-G solvation = -30.969814 kcal Electronic energy + Delta-G solvation = -41592.088720 eV Core-core repulsion = 36245.105775 eV Total energy + Delta-G solvation = -5346.982945 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 486.060 amu Computer time = 2.08 seconds Orbital eigenvalues (eV) -43.82946 -42.37068 -41.11334 -39.66437 -39.13856 -38.09626 -37.77501 -36.34812 -34.58654 -34.17956 -33.22511 -32.88638 -32.40139 -31.88101 -30.36142 -30.15744 -27.11378 -26.39820 -26.19715 -24.99799 -23.96207 -23.54897 -23.09429 -22.48943 -21.84655 -21.28344 -20.40190 -19.73420 -19.11842 -18.73688 -18.65783 -17.96067 -17.82442 -17.35163 -17.15945 -16.71140 -16.66747 -16.45840 -16.28233 -16.10823 -15.83180 -15.80793 -15.57006 -15.33403 -15.15143 -14.71592 -14.62595 -14.48173 -14.43364 -14.34438 -14.18817 -13.97499 -13.84442 -13.61889 -13.46876 -13.26034 -13.17474 -13.09257 -12.69210 -12.68244 -12.46884 -12.30333 -12.18914 -11.95850 -11.76327 -11.48309 -11.35016 -11.17891 -11.05468 -10.90092 -10.65258 -10.40591 -10.37755 -10.14919 -10.10789 -9.60009 -9.01191 -5.07802 -0.66144 -0.31887 -0.04564 0.22277 0.56017 0.64877 1.16334 1.35456 1.51374 1.64662 1.76699 1.88274 1.99254 2.44388 2.53075 2.99872 3.02528 3.13430 3.30125 3.38147 3.43923 3.53200 3.57278 3.66059 3.70505 3.73180 3.79733 3.82680 3.91425 3.97782 4.08569 4.19917 4.25204 4.29662 4.33818 4.38037 4.52672 4.53447 4.55589 4.60861 4.69778 4.70807 4.74930 4.78774 4.79878 4.86789 4.91914 4.94358 5.03194 5.08694 5.10487 5.11678 5.25097 5.35400 5.40890 5.54902 5.69892 5.87774 6.31050 6.63318 6.79418 6.83313 7.06319 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.042 4.042 3 Si 0.800 3.200 4 C -0.032 4.032 5 C -0.176 4.176 6 C -0.186 4.186 7 C 0.015 3.985 8 C -0.044 4.044 9 C -0.055 4.055 10 C -0.178 4.178 11 C 0.561 3.439 12 O -0.538 6.538 13 N -0.691 5.691 14 C 0.188 3.812 15 C -0.057 4.057 16 C -0.108 4.108 17 C -0.091 4.091 18 C -0.105 4.105 19 Br -0.055 7.055 20 C -0.097 4.097 21 C -0.107 4.107 22 C -0.137 4.137 23 C 0.086 3.914 24 H 0.099 0.901 25 O -0.568 6.568 26 C -0.149 4.149 27 C 0.166 3.834 28 O -0.491 6.491 29 C -0.144 4.144 30 C -0.044 4.044 31 O -0.192 6.192 32 H 0.413 0.587 33 H 0.123 0.877 34 H -0.298 1.298 35 H -0.292 1.292 36 H 0.171 0.829 37 H 0.181 0.819 38 H 0.133 0.867 39 H 0.407 0.593 40 H 0.157 0.843 41 H 0.149 0.851 42 H 0.135 0.865 43 H 0.119 0.881 44 H 0.051 0.949 45 H 0.124 0.876 46 H 0.396 0.604 47 H 0.127 0.873 48 H 0.090 0.910 49 H 0.409 0.591 50 H 0.168 0.832 51 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.166 1.117 -9.031 10.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.151 4.151 3 Si 0.705 3.295 4 C -0.081 4.081 5 C -0.194 4.194 6 C -0.204 4.204 7 C -0.034 4.034 8 C -0.045 4.045 9 C -0.074 4.074 10 C -0.181 4.181 11 C 0.349 3.651 12 O -0.415 6.415 13 N -0.343 5.343 14 C 0.101 3.899 15 C -0.059 4.059 16 C -0.127 4.127 17 C -0.111 4.111 18 C -0.184 4.184 19 Br 0.031 6.969 20 C -0.117 4.117 21 C -0.126 4.126 22 C -0.175 4.175 23 C 0.026 3.974 24 H 0.117 0.883 25 O -0.376 6.376 26 C -0.187 4.187 27 C 0.119 3.881 28 O -0.304 6.304 29 C -0.162 4.162 30 C -0.062 4.062 31 O -0.091 6.091 32 H 0.266 0.734 33 H 0.141 0.859 34 H -0.226 1.226 35 H -0.219 1.219 36 H 0.189 0.811 37 H 0.199 0.801 38 H 0.151 0.849 39 H 0.244 0.756 40 H 0.175 0.825 41 H 0.166 0.834 42 H 0.153 0.847 43 H 0.137 0.863 44 H 0.070 0.930 45 H 0.142 0.858 46 H 0.247 0.753 47 H 0.145 0.855 48 H 0.109 0.891 49 H 0.270 0.730 50 H 0.186 0.814 51 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges -2.610 1.649 -6.613 7.298 hybrid contribution -0.251 -0.790 -0.538 0.988 sum -2.861 0.859 -7.151 7.750 Atomic orbital electron populations 1.86419 1.16220 1.82596 1.52037 1.24018 0.86435 1.12136 0.92539 0.94369 0.77091 0.73965 0.84027 1.22109 1.00733 0.93543 0.91732 1.21861 1.03370 0.95872 0.98344 1.22226 1.01782 0.98929 0.97508 1.20574 1.04182 0.87908 0.90777 1.17758 1.00447 0.94567 0.91685 1.21282 0.94429 0.96889 0.94827 1.20314 1.06145 0.94684 0.96993 1.18105 0.79254 0.84305 0.83425 1.90824 1.40444 1.84529 1.25715 1.45396 1.61650 1.06085 1.21200 1.20072 0.88781 0.82652 0.98435 1.20042 0.94767 0.94720 0.96331 1.21202 0.94564 0.98372 0.98550 1.21330 0.93337 0.98259 0.98153 1.21937 0.90633 1.00217 1.05600 1.96743 1.04561 1.98119 1.97505 1.21188 0.95541 0.96908 0.98078 1.20928 0.92652 0.98952 1.00044 1.23614 0.96504 1.01157 0.96238 1.22787 0.86733 0.93240 0.94603 0.88291 1.86501 1.39507 1.44946 1.66646 1.24097 0.97591 0.98089 0.98894 1.18856 0.93586 0.91350 0.84317 1.84716 1.24965 1.92420 1.28348 1.21609 1.00180 0.96516 0.97893 1.21423 0.94322 0.99143 0.91332 1.83925 1.58948 1.39043 1.27173 0.73419 0.85945 1.22597 1.21900 0.81103 0.80128 0.84918 0.75606 0.82514 0.83357 0.84732 0.86283 0.93045 0.85785 0.75346 0.85465 0.89121 0.72993 0.81425 0.81390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.55 12.86 -148.98 -1.92 -0.37 16 2 C -0.04 0.11 2.97 71.24 0.21 0.32 16 3 Si 0.80 -2.83 32.11 68.60 2.20 -0.62 16 4 C -0.03 -0.15 6.24 24.87 0.16 0.00 16 5 C -0.18 -0.56 10.78 22.13 0.24 -0.32 16 6 C -0.19 -0.45 10.26 22.41 0.23 -0.22 16 7 C 0.01 0.08 7.03 24.27 0.17 0.25 16 8 C -0.04 -0.18 5.87 -20.13 -0.12 -0.29 16 9 C -0.06 -0.28 9.20 22.79 0.21 -0.07 16 10 C -0.18 -1.28 5.88 -20.04 -0.12 -1.40 16 11 C 0.56 5.22 6.34 86.70 0.55 5.77 16 12 O -0.54 -8.14 13.64 16.98 0.23 -7.91 16 13 N -0.69 -2.79 3.76 -427.03 -1.60 -4.40 16 14 C 0.19 0.36 0.92 3.38 0.00 0.36 16 15 C -0.06 -0.22 4.51 -19.86 -0.09 -0.31 16 16 C -0.11 -0.17 8.94 22.26 0.20 0.03 16 17 C -0.09 -0.28 9.79 22.29 0.22 -0.07 16 18 C -0.10 -0.59 6.22 22.31 0.14 -0.46 16 19 Br -0.05 -0.29 33.70 -20.37 -0.69 -0.98 16 20 C -0.10 -0.58 9.79 22.29 0.22 -0.36 16 21 C -0.11 -0.63 8.64 22.27 0.19 -0.43 16 22 C -0.14 -0.35 6.66 31.12 0.21 -0.14 16 23 C 0.09 -0.22 5.28 31.22 0.16 -0.05 16 24 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 25 O -0.57 -0.33 13.09 -148.98 -1.95 -2.28 16 26 C -0.15 0.66 7.15 31.21 0.22 0.88 16 27 C 0.17 1.00 6.72 22.89 0.15 1.15 16 28 O -0.49 -3.77 11.55 -68.69 -0.79 -4.56 16 29 C -0.14 -0.09 9.96 22.30 0.22 0.13 16 30 C -0.04 0.02 9.54 22.55 0.22 0.23 16 31 O -0.19 -1.51 8.80 -6.51 -0.06 -1.57 16 32 H 0.41 -5.90 8.74 -74.06 -0.65 -6.55 16 33 H 0.12 -1.02 7.96 -2.39 -0.02 -1.04 16 34 H -0.30 -1.40 7.11 99.48 0.71 -0.70 16 35 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 36 H 0.17 -0.15 8.06 -2.91 -0.02 -0.17 16 37 H 0.18 -0.70 7.25 -2.91 -0.02 -0.72 16 38 H 0.13 0.46 6.25 -2.91 -0.02 0.44 16 39 H 0.41 0.50 6.70 -92.71 -0.62 -0.12 16 40 H 0.16 -0.64 6.29 -2.91 -0.02 -0.66 16 41 H 0.15 -0.05 8.06 -2.91 -0.02 -0.08 16 42 H 0.13 0.53 8.06 -2.91 -0.02 0.51 16 43 H 0.12 0.67 6.89 -2.91 -0.02 0.65 16 44 H 0.05 0.55 7.57 -2.39 -0.02 0.53 16 45 H 0.12 -0.20 6.02 -2.38 -0.01 -0.22 16 46 H 0.40 -2.96 9.12 -74.06 -0.68 -3.64 16 47 H 0.13 -0.99 7.93 -2.39 -0.02 -1.01 16 48 H 0.09 -0.51 8.09 -2.38 -0.02 -0.53 16 49 H 0.41 0.27 9.06 -74.06 -0.67 -0.40 16 50 H 0.17 -0.71 8.06 -2.91 -0.02 -0.73 16 51 H 0.17 -1.10 6.96 -2.92 -0.02 -1.12 16 Total: 0.00 -31.53 447.60 -2.48 -34.01 By element: Atomic # 1 Polarization: -14.84 SS G_CDS: -1.50 Total: -16.34 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: 3.60 Total: 5.01 kcal Atomic # 7 Polarization: -2.79 SS G_CDS: -1.60 Total: -4.40 kcal Atomic # 8 Polarization: -12.20 SS G_CDS: -4.49 Total: -16.68 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: 2.20 Total: -0.62 kcal Atomic # 35 Polarization: -0.29 SS G_CDS: -0.69 Total: -0.98 kcal Total: -31.53 -2.48 -34.01 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13259648.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.044 kcal (2) G-P(sol) polarization free energy of solvation -31.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.08 seconds