Wall clock time and date at job start Sat Mar 6 2021 23:43:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47241 * 2 1 4 4 C 1.50700 * 109.47459 * 120.00051 * 2 1 3 5 5 C 1.34190 * 126.53733 * 255.02221 * 4 2 1 6 6 N 1.36870 * 109.96452 * 179.97438 * 5 4 2 7 7 C 1.37399 * 109.98156 * 0.02562 * 6 5 4 8 8 C 1.39326 * 133.25534 * 180.02562 * 7 6 5 9 9 C 1.36350 * 120.24155 * 179.97438 * 8 7 6 10 10 C 1.40170 * 120.66873 * 0.02562 * 9 8 7 11 11 C 1.47648 * 119.97533 * 180.02562 * 10 9 8 12 12 O 1.21584 * 120.00250 * 179.97438 * 11 10 9 13 13 N 1.34774 * 120.00182 * 359.97438 * 11 10 9 14 14 C 1.46504 * 120.00322 * 174.79586 * 13 11 10 15 15 C 1.50698 * 112.84810 * 76.02907 * 14 13 11 16 16 C 1.38242 * 119.98729 * 184.85828 * 15 14 13 17 17 C 1.38212 * 120.00851 * 179.77036 * 16 15 14 18 18 C 1.38325 * 119.99088 * 0.50709 * 17 16 15 19 19 Br 1.89106 * 120.01282 * 179.76716 * 18 17 16 20 20 C 1.38320 * 119.98083 * 359.75111 * 18 17 16 21 21 C 1.38226 * 119.98804 * 359.97438 * 20 18 17 22 22 C 1.53786 * 113.61179 * 304.83604 * 14 13 11 23 23 C 1.53788 * 87.08005 * 270.88304 * 22 14 13 24 24 H 1.08993 * 113.61081 * 220.01820 * 23 22 14 25 25 O 1.42895 * 113.61219 * 89.19932 * 23 22 14 26 26 C 1.53780 * 113.61253 * 207.34013 * 14 13 11 27 27 C 1.39192 * 120.05168 * 0.02562 * 10 9 8 28 28 C 1.39226 * 119.39370 * 359.97438 * 27 10 9 29 29 H 0.96702 * 113.99812 * 299.99763 * 1 2 3 30 30 H 1.09004 * 109.47088 * 240.00395 * 2 1 3 31 31 H 1.48503 * 109.99679 * 300.00358 * 3 2 1 32 32 H 1.48496 * 109.99996 * 61.31665 * 3 2 1 33 33 H 1.07993 * 125.02318 * 0.02562 * 5 4 2 34 34 H 0.96993 * 125.00863 * 180.27348 * 6 5 4 35 35 H 1.08008 * 119.87854 * 359.97438 * 8 7 6 36 36 H 1.08000 * 119.66547 * 180.02562 * 9 8 7 37 37 H 0.97002 * 119.99884 * 354.79369 * 13 11 10 38 38 H 1.08001 * 119.99749 * 0.02565 * 16 15 14 39 39 H 1.08008 * 120.00537 * 180.27797 * 17 16 15 40 40 H 1.07999 * 120.01277 * 180.02562 * 20 18 17 41 41 H 1.08003 * 119.99292 * 179.97438 * 21 20 18 42 42 H 1.09000 * 113.61129 * 25.43229 * 22 14 13 43 43 H 1.08994 * 113.61027 * 156.24942 * 22 14 13 44 44 H 0.96701 * 114.00258 * 179.97438 * 25 23 22 45 45 H 1.09004 * 113.60750 * 203.66254 * 26 14 13 46 46 H 1.08998 * 113.61565 * 334.56349 * 26 14 13 47 47 H 1.07996 * 120.30189 * 180.02562 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4604 -0.1386 2.3230 6 7 2.8021 -1.1004 3.2349 7 6 2.4953 -2.3454 2.7414 8 6 2.6337 -3.6349 3.2505 9 6 2.2302 -4.7103 2.5158 10 6 1.6726 -4.5369 1.2415 11 6 1.2403 -5.7122 0.4593 12 8 0.7561 -5.5624 -0.6459 13 7 1.3824 -6.9512 0.9703 14 6 0.8508 -8.1080 0.2455 15 6 1.7011 -8.5000 -0.9354 16 6 1.2836 -9.5092 -1.7828 17 6 2.0608 -9.8658 -2.8687 18 6 3.2616 -9.2199 -3.1014 19 35 4.3287 -9.7118 -4.5831 20 6 3.6816 -8.2137 -2.2501 21 6 2.9009 -7.8539 -1.1677 22 6 -0.6467 -7.9929 -0.0849 23 6 -0.9176 -8.6544 1.2767 24 1 -1.7303 -9.3804 1.2555 25 8 -1.0346 -7.7217 2.3530 26 6 0.4783 -9.2886 1.1578 27 6 1.5260 -3.2576 0.7129 28 6 1.9372 -2.1579 1.4612 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8901 31 1 1.5614 2.4679 -1.2085 32 1 1.5879 2.4586 1.2242 33 1 2.5958 0.9237 2.4627 34 1 3.1988 -0.9281 4.1031 35 1 3.0621 -3.7832 4.2309 36 1 2.3414 -5.7057 2.9196 37 1 1.8368 -7.0770 1.8181 38 1 0.3480 -10.0163 -1.5988 39 1 1.7324 -10.6513 -3.5333 40 1 4.6188 -7.7088 -2.4316 41 1 3.2289 -7.0686 -0.5027 42 1 -1.0018 -6.9644 -0.1490 43 1 -0.9540 -8.6006 -0.9359 44 1 -1.2054 -8.1317 3.2120 45 1 0.4783 -10.2517 0.6473 46 1 1.0314 -9.3061 2.0969 47 1 1.0965 -3.1194 -0.2683 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:43:51 Heat of formation + Delta-G solvation = 21.005201 kcal Electronic energy + Delta-G solvation = -34826.099987 eV Core-core repulsion = 30181.535461 eV Total energy + Delta-G solvation = -4644.564525 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.057 amu Computer time = 3.80 seconds Orbital eigenvalues (eV) -42.51248 -42.06918 -39.91336 -39.33299 -37.93370 -37.37202 -36.26513 -34.06240 -33.25418 -33.05471 -31.91145 -30.79456 -30.47114 -30.06030 -27.01987 -26.47900 -25.96214 -24.45495 -23.69622 -23.46332 -22.38247 -21.57762 -20.77954 -20.21965 -19.33812 -18.72471 -18.49022 -17.87733 -17.49172 -17.24141 -16.82377 -16.36837 -16.23008 -16.04014 -15.88655 -15.62369 -15.56408 -15.32657 -15.06674 -14.88198 -14.74980 -14.62643 -14.46149 -14.25751 -14.12053 -13.79680 -13.69525 -13.47579 -13.32519 -13.05142 -12.61956 -12.54862 -12.43022 -12.33382 -12.18537 -12.08086 -11.76051 -11.57921 -11.40282 -11.14142 -11.02345 -10.76945 -10.64593 -10.44126 -9.99410 -9.94332 -9.43947 -9.29956 -8.81439 -4.94946 -0.01521 0.12039 0.22013 0.38553 0.76109 1.31388 1.48719 1.56806 1.95933 2.00989 2.03739 2.12698 2.59094 2.99767 3.01454 3.37911 3.50542 3.51959 3.59974 3.62259 3.69219 3.76054 3.81843 3.82795 3.96337 3.99060 4.10579 4.25389 4.37860 4.38573 4.44678 4.47487 4.53109 4.54461 4.61265 4.63204 4.70852 4.81912 4.84041 4.89351 5.00977 5.04787 5.12214 5.24974 5.27677 5.28359 5.41042 5.41995 5.53295 5.62332 5.74431 5.84709 6.00431 6.36515 6.54436 6.60608 6.61721 7.40424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.528 6.528 2 C -0.042 4.042 3 Si 0.686 3.314 4 C -0.187 4.187 5 C 0.058 3.942 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.135 4.135 9 C -0.064 4.064 10 C -0.165 4.165 11 C 0.570 3.430 12 O -0.526 6.526 13 N -0.700 5.700 14 C 0.198 3.802 15 C -0.059 4.059 16 C -0.108 4.108 17 C -0.088 4.088 18 C -0.092 4.092 19 Br -0.052 7.052 20 C -0.088 4.088 21 C -0.093 4.093 22 C -0.128 4.128 23 C 0.080 3.920 24 H 0.074 0.926 25 O -0.543 6.543 26 C -0.163 4.163 27 C 0.008 3.992 28 C -0.102 4.102 29 H 0.373 0.627 30 H 0.116 0.884 31 H -0.256 1.256 32 H -0.260 1.260 33 H 0.175 0.825 34 H 0.421 0.579 35 H 0.127 0.873 36 H 0.127 0.873 37 H 0.402 0.598 38 H 0.132 0.868 39 H 0.134 0.866 40 H 0.132 0.868 41 H 0.126 0.874 42 H 0.094 0.906 43 H 0.105 0.895 44 H 0.380 0.620 45 H 0.106 0.894 46 H 0.083 0.917 47 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.702 -0.648 7.887 8.362 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.153 4.153 3 Si 0.587 3.413 4 C -0.195 4.195 5 C -0.069 4.069 6 N -0.187 5.187 7 C 0.010 3.990 8 C -0.155 4.155 9 C -0.084 4.084 10 C -0.170 4.170 11 C 0.359 3.641 12 O -0.403 6.403 13 N -0.352 5.352 14 C 0.110 3.890 15 C -0.060 4.060 16 C -0.128 4.128 17 C -0.108 4.108 18 C -0.171 4.171 19 Br 0.034 6.966 20 C -0.108 4.108 21 C -0.112 4.112 22 C -0.166 4.166 23 C 0.021 3.979 24 H 0.092 0.908 25 O -0.348 6.348 26 C -0.201 4.201 27 C -0.012 4.012 28 C -0.107 4.107 29 H 0.220 0.780 30 H 0.134 0.866 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.192 0.808 34 H 0.258 0.742 35 H 0.145 0.855 36 H 0.145 0.855 37 H 0.238 0.762 38 H 0.150 0.850 39 H 0.152 0.848 40 H 0.150 0.850 41 H 0.144 0.856 42 H 0.113 0.887 43 H 0.124 0.876 44 H 0.227 0.773 45 H 0.125 0.875 46 H 0.101 0.899 47 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.777 0.305 5.609 6.266 hybrid contribution -0.862 -0.428 2.235 2.433 sum 1.915 -0.123 7.843 8.075 Atomic orbital electron populations 1.86644 1.17908 1.79872 1.48948 1.24366 0.83525 1.10034 0.97339 0.95207 0.91413 0.74155 0.80497 1.20692 1.08990 0.91957 0.97813 1.21742 1.01086 0.94417 0.89625 1.41729 1.54818 1.04163 1.18030 1.18432 0.99896 0.86479 0.94191 1.19653 1.05927 0.88868 1.01102 1.20571 0.96520 0.98276 0.92987 1.19526 1.08044 0.93212 0.96202 1.18093 0.77957 0.82544 0.85545 1.90812 1.43980 1.85889 1.19603 1.45333 1.59963 1.04861 1.25011 1.19823 0.92455 0.86550 0.90126 1.19981 0.94790 0.95314 0.95959 1.20881 0.99942 0.97507 0.94435 1.21071 0.92773 0.99317 0.97607 1.21824 0.97261 1.01517 0.96515 1.96761 1.68224 1.91970 1.39688 1.21121 1.00147 0.95608 0.93879 1.20937 0.93952 0.99167 0.97179 1.23471 0.93245 1.04282 0.95586 1.22708 0.95282 0.91210 0.88747 0.90795 1.86550 1.94522 1.35065 1.18630 1.24064 0.98307 0.97412 1.00352 1.20686 0.92396 0.89200 0.98882 1.18907 1.04582 0.92892 0.94296 0.77976 0.86625 1.18013 1.18496 0.80756 0.74171 0.85545 0.85514 0.76182 0.85023 0.84814 0.85043 0.85603 0.88696 0.87632 0.77314 0.87531 0.89855 0.84418 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 37. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.30 12.88 -35.23 -0.45 -1.76 16 2 C -0.04 -0.03 3.06 36.01 0.11 0.08 16 3 Si 0.69 -0.85 30.82 -169.99 -5.24 -6.09 16 4 C -0.19 -0.14 5.58 -102.69 -0.57 -0.71 16 5 C 0.06 -0.09 10.43 -16.73 -0.17 -0.26 16 6 N -0.59 1.05 6.05 -10.61 -0.06 0.99 16 7 C 0.12 0.07 7.27 -83.95 -0.61 -0.54 16 8 C -0.13 0.07 10.00 -39.86 -0.40 -0.33 16 9 C -0.06 0.01 9.46 -39.54 -0.37 -0.36 16 10 C -0.17 -0.40 5.87 -104.98 -0.62 -1.01 16 11 C 0.57 1.88 6.18 -12.42 -0.08 1.81 16 12 O -0.53 -3.63 14.57 5.29 0.08 -3.55 16 13 N -0.70 -0.22 3.62 -48.91 -0.18 -0.40 16 14 C 0.20 0.04 0.97 -132.16 -0.13 -0.09 16 15 C -0.06 -0.08 5.06 -104.62 -0.53 -0.61 16 16 C -0.11 -0.06 8.42 -39.59 -0.33 -0.40 16 17 C -0.09 -0.12 9.79 -39.56 -0.39 -0.51 16 18 C -0.09 -0.23 6.22 -39.52 -0.25 -0.47 16 19 Br -0.05 -0.13 33.70 -68.01 -2.29 -2.42 16 20 C -0.09 -0.21 9.79 -39.56 -0.39 -0.60 16 21 C -0.09 -0.21 9.00 -39.59 -0.36 -0.57 16 22 C -0.13 -0.13 6.53 -25.91 -0.17 -0.30 16 23 C 0.08 -0.11 5.27 -25.91 -0.14 -0.25 16 24 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 25 O -0.54 0.32 13.09 -35.23 -0.46 -0.14 16 26 C -0.16 0.39 7.11 -25.92 -0.18 0.21 16 27 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 28 C -0.10 -0.25 6.34 -105.16 -0.67 -0.91 16 29 H 0.37 -0.25 8.70 45.56 0.40 0.15 16 30 H 0.12 0.08 7.96 -51.93 -0.41 -0.33 16 31 H -0.26 -0.63 7.11 56.52 0.40 -0.22 16 32 H -0.26 0.05 7.00 56.52 0.40 0.45 16 33 H 0.18 -0.73 6.27 -52.49 -0.33 -1.06 16 34 H 0.42 -2.02 8.96 -40.82 -0.37 -2.39 16 35 H 0.13 -0.38 8.06 -52.48 -0.42 -0.80 16 36 H 0.13 -0.38 6.38 -52.49 -0.33 -0.71 16 37 H 0.40 -0.81 6.77 -40.82 -0.28 -1.08 16 38 H 0.13 -0.24 6.74 -52.49 -0.35 -0.60 16 39 H 0.13 -0.01 8.06 -52.48 -0.42 -0.44 16 40 H 0.13 0.17 8.06 -52.49 -0.42 -0.25 16 41 H 0.13 0.24 6.53 -52.48 -0.34 -0.11 16 42 H 0.09 0.42 6.67 -51.93 -0.35 0.08 16 43 H 0.11 -0.04 6.66 -51.93 -0.35 -0.38 16 44 H 0.38 -1.77 9.12 45.56 0.42 -1.36 16 45 H 0.11 -0.36 7.29 -51.93 -0.38 -0.74 16 46 H 0.08 -0.27 8.13 -51.93 -0.42 -0.70 16 47 H 0.14 0.66 7.64 -52.49 -0.40 0.26 16 LS Contribution 406.99 15.07 6.13 6.13 Total: 0.00 -10.78 406.99 -13.48 -24.26 By element: Atomic # 1 Polarization: -6.47 SS G_CDS: -4.39 Total: -10.86 kcal Atomic # 6 Polarization: 0.45 SS G_CDS: -6.61 Total: -6.16 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.24 Total: 0.59 kcal Atomic # 8 Polarization: -4.62 SS G_CDS: -0.84 Total: -5.45 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.24 Total: -6.09 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -2.29 Total: -2.42 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -10.78 -13.48 -24.26 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.265 kcal (2) G-P(sol) polarization free energy of solvation -10.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.260 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.80 seconds