Wall clock time and date at job start Sat Mar 6 2021 23:43:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.47241 * 2 1 4 4 C 1.50700 * 109.47459 * 120.00051 * 2 1 3 5 5 C 1.34190 * 126.53733 * 255.02221 * 4 2 1 6 6 N 1.36870 * 109.96452 * 179.97438 * 5 4 2 7 7 C 1.37399 * 109.98156 * 0.02562 * 6 5 4 8 8 C 1.39326 * 133.25534 * 180.02562 * 7 6 5 9 9 C 1.36350 * 120.24155 * 179.97438 * 8 7 6 10 10 C 1.40170 * 120.66873 * 0.02562 * 9 8 7 11 11 C 1.47648 * 119.97533 * 180.02562 * 10 9 8 12 12 O 1.21584 * 120.00250 * 179.97438 * 11 10 9 13 13 N 1.34774 * 120.00182 * 359.97438 * 11 10 9 14 14 C 1.46504 * 120.00322 * 174.79586 * 13 11 10 15 15 C 1.50698 * 112.84810 * 76.02907 * 14 13 11 16 16 C 1.38242 * 119.98729 * 184.85828 * 15 14 13 17 17 C 1.38212 * 120.00851 * 179.77036 * 16 15 14 18 18 C 1.38325 * 119.99088 * 0.50709 * 17 16 15 19 19 Br 1.89106 * 120.01282 * 179.76716 * 18 17 16 20 20 C 1.38320 * 119.98083 * 359.75111 * 18 17 16 21 21 C 1.38226 * 119.98804 * 359.97438 * 20 18 17 22 22 C 1.53786 * 113.61179 * 304.83604 * 14 13 11 23 23 C 1.53788 * 87.08005 * 270.88304 * 22 14 13 24 24 H 1.08993 * 113.61081 * 220.01820 * 23 22 14 25 25 O 1.42895 * 113.61219 * 89.19932 * 23 22 14 26 26 C 1.53780 * 113.61253 * 207.34013 * 14 13 11 27 27 C 1.39192 * 120.05168 * 0.02562 * 10 9 8 28 28 C 1.39226 * 119.39370 * 359.97438 * 27 10 9 29 29 H 0.96702 * 113.99812 * 299.99763 * 1 2 3 30 30 H 1.09004 * 109.47088 * 240.00395 * 2 1 3 31 31 H 1.48503 * 109.99679 * 300.00358 * 3 2 1 32 32 H 1.48496 * 109.99996 * 61.31665 * 3 2 1 33 33 H 1.07993 * 125.02318 * 0.02562 * 5 4 2 34 34 H 0.96993 * 125.00863 * 180.27348 * 6 5 4 35 35 H 1.08008 * 119.87854 * 359.97438 * 8 7 6 36 36 H 1.08000 * 119.66547 * 180.02562 * 9 8 7 37 37 H 0.97002 * 119.99884 * 354.79369 * 13 11 10 38 38 H 1.08001 * 119.99749 * 0.02565 * 16 15 14 39 39 H 1.08008 * 120.00537 * 180.27797 * 17 16 15 40 40 H 1.07999 * 120.01277 * 180.02562 * 20 18 17 41 41 H 1.08003 * 119.99292 * 179.97438 * 21 20 18 42 42 H 1.09000 * 113.61129 * 25.43229 * 22 14 13 43 43 H 1.08994 * 113.61027 * 156.24942 * 22 14 13 44 44 H 0.96701 * 114.00258 * 179.97438 * 25 23 22 45 45 H 1.09004 * 113.60750 * 203.66254 * 26 14 13 46 46 H 1.08998 * 113.61565 * 334.56349 * 26 14 13 47 47 H 1.07996 * 120.30189 * 180.02562 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4604 -0.1386 2.3230 6 7 2.8021 -1.1004 3.2349 7 6 2.4953 -2.3454 2.7414 8 6 2.6337 -3.6349 3.2505 9 6 2.2302 -4.7103 2.5158 10 6 1.6726 -4.5369 1.2415 11 6 1.2403 -5.7122 0.4593 12 8 0.7561 -5.5624 -0.6459 13 7 1.3824 -6.9512 0.9703 14 6 0.8508 -8.1080 0.2455 15 6 1.7011 -8.5000 -0.9354 16 6 1.2836 -9.5092 -1.7828 17 6 2.0608 -9.8658 -2.8687 18 6 3.2616 -9.2199 -3.1014 19 35 4.3287 -9.7118 -4.5831 20 6 3.6816 -8.2137 -2.2501 21 6 2.9009 -7.8539 -1.1677 22 6 -0.6467 -7.9929 -0.0849 23 6 -0.9176 -8.6544 1.2767 24 1 -1.7303 -9.3804 1.2555 25 8 -1.0346 -7.7217 2.3530 26 6 0.4783 -9.2886 1.1578 27 6 1.5260 -3.2576 0.7129 28 6 1.9372 -2.1579 1.4612 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8901 31 1 1.5614 2.4679 -1.2085 32 1 1.5879 2.4586 1.2242 33 1 2.5958 0.9237 2.4627 34 1 3.1988 -0.9281 4.1031 35 1 3.0621 -3.7832 4.2309 36 1 2.3414 -5.7057 2.9196 37 1 1.8368 -7.0770 1.8181 38 1 0.3480 -10.0163 -1.5988 39 1 1.7324 -10.6513 -3.5333 40 1 4.6188 -7.7088 -2.4316 41 1 3.2289 -7.0686 -0.5027 42 1 -1.0018 -6.9644 -0.1490 43 1 -0.9540 -8.6006 -0.9359 44 1 -1.2054 -8.1317 3.2120 45 1 0.4783 -10.2517 0.6473 46 1 1.0314 -9.3061 2.0969 47 1 1.0965 -3.1194 -0.2683 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:43:49 Heat of formation + Delta-G solvation = 18.983895 kcal Electronic energy + Delta-G solvation = -34826.187637 eV Core-core repulsion = 30181.535461 eV Total energy + Delta-G solvation = -4644.652176 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 443.057 amu Computer time = 1.54 seconds Orbital eigenvalues (eV) -42.51863 -42.09402 -40.06975 -39.36230 -38.03888 -37.44347 -36.26766 -34.16999 -33.27966 -33.16754 -32.01210 -30.84070 -30.51606 -30.15385 -26.96211 -26.50377 -26.00565 -24.52666 -23.79102 -23.46550 -22.43005 -21.63248 -20.79631 -20.27895 -19.36616 -18.70481 -18.54428 -17.85839 -17.56641 -17.24805 -16.88767 -16.42629 -16.30033 -16.13877 -16.00121 -15.65667 -15.63099 -15.32940 -15.08339 -14.94793 -14.79123 -14.71229 -14.54650 -14.35200 -14.11345 -13.79726 -13.71518 -13.54420 -13.25517 -13.11804 -12.60419 -12.56145 -12.51682 -12.41142 -12.27043 -12.13846 -11.80387 -11.65460 -11.46696 -11.31752 -10.93201 -10.86842 -10.80462 -10.48938 -10.10274 -10.05913 -9.56154 -9.32174 -8.81297 -4.87854 -0.13653 0.00031 0.21457 0.27118 0.59888 1.34234 1.51250 1.60493 1.87436 2.00743 2.04172 2.12081 2.49360 2.90045 3.14334 3.45156 3.50869 3.55886 3.62121 3.64548 3.69653 3.75099 3.83113 3.88739 3.90412 3.95778 4.14650 4.28095 4.36181 4.37114 4.41246 4.46952 4.55541 4.60894 4.62322 4.67109 4.80156 4.83905 4.85647 4.89873 5.00080 5.00856 5.03390 5.15657 5.16459 5.27659 5.33876 5.36050 5.48431 5.57753 5.66845 5.75443 5.98849 6.53148 6.55182 6.61334 6.95149 7.24805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.064 4.064 3 Si 0.789 3.211 4 C -0.217 4.217 5 C 0.081 3.919 6 N -0.571 5.571 7 C 0.111 3.889 8 C -0.125 4.125 9 C -0.065 4.065 10 C -0.176 4.176 11 C 0.567 3.433 12 O -0.574 6.574 13 N -0.683 5.683 14 C 0.189 3.811 15 C -0.064 4.064 16 C -0.107 4.107 17 C -0.093 4.093 18 C -0.106 4.106 19 Br -0.056 7.056 20 C -0.100 4.100 21 C -0.107 4.107 22 C -0.141 4.141 23 C 0.087 3.913 24 H 0.094 0.906 25 O -0.565 6.565 26 C -0.144 4.144 27 C -0.023 4.023 28 C -0.127 4.127 29 H 0.384 0.616 30 H 0.097 0.903 31 H -0.311 1.311 32 H -0.257 1.257 33 H 0.209 0.791 34 H 0.439 0.561 35 H 0.161 0.839 36 H 0.157 0.843 37 H 0.414 0.586 38 H 0.159 0.841 39 H 0.149 0.851 40 H 0.133 0.867 41 H 0.122 0.878 42 H 0.052 0.948 43 H 0.116 0.884 44 H 0.397 0.603 45 H 0.124 0.876 46 H 0.100 0.900 47 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.499 -1.338 11.217 11.826 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.171 4.171 3 Si 0.691 3.309 4 C -0.225 4.225 5 C -0.046 4.046 6 N -0.175 5.175 7 C 0.002 3.998 8 C -0.146 4.146 9 C -0.085 4.085 10 C -0.180 4.180 11 C 0.356 3.644 12 O -0.455 6.455 13 N -0.335 5.335 14 C 0.101 3.899 15 C -0.065 4.065 16 C -0.126 4.126 17 C -0.112 4.112 18 C -0.185 4.185 19 Br 0.029 6.971 20 C -0.120 4.120 21 C -0.126 4.126 22 C -0.179 4.179 23 C 0.028 3.972 24 H 0.112 0.888 25 O -0.373 6.373 26 C -0.182 4.182 27 C -0.043 4.043 28 C -0.132 4.132 29 H 0.233 0.767 30 H 0.116 0.884 31 H -0.239 1.239 32 H -0.183 1.183 33 H 0.226 0.774 34 H 0.280 0.720 35 H 0.179 0.821 36 H 0.175 0.825 37 H 0.253 0.747 38 H 0.177 0.823 39 H 0.166 0.834 40 H 0.151 0.849 41 H 0.140 0.860 42 H 0.071 0.929 43 H 0.134 0.866 44 H 0.248 0.752 45 H 0.142 0.858 46 H 0.118 0.882 47 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 3.598 -0.441 9.031 9.732 hybrid contribution -1.161 -0.189 1.159 1.651 sum 2.437 -0.629 10.190 10.496 Atomic orbital electron populations 1.86599 1.19444 1.80647 1.49882 1.24788 0.82710 1.12562 0.97088 0.94089 0.89592 0.69899 0.77283 1.20754 1.11232 0.91504 0.98961 1.22162 0.98457 0.95699 0.88299 1.41749 1.53943 1.03148 1.18624 1.18610 0.99794 0.87847 0.93577 1.20048 1.04438 0.88001 1.02077 1.20847 0.95862 1.00086 0.91686 1.19607 1.08706 0.92274 0.97439 1.18342 0.77321 0.83664 0.85041 1.90778 1.46324 1.86631 1.21736 1.45198 1.59056 1.04090 1.25169 1.20044 0.91639 0.87507 0.90689 1.20216 0.94482 0.95271 0.96573 1.21182 1.00635 0.97114 0.93668 1.21334 0.92377 0.99482 0.98054 1.21945 0.97925 1.02044 0.96602 1.96737 1.68501 1.91951 1.39921 1.21219 1.00537 0.96016 0.94238 1.21011 0.94735 0.99463 0.97434 1.23563 0.94032 1.02241 0.98017 1.22678 0.96680 0.90763 0.87095 0.88796 1.86511 1.94664 1.36241 1.19865 1.24033 0.97160 0.96626 1.00378 1.20557 0.94583 0.90838 0.98285 1.19183 1.05124 0.93490 0.95401 0.76723 0.88449 1.23934 1.18270 0.77418 0.72016 0.82142 0.82533 0.74692 0.82307 0.83354 0.84865 0.86012 0.92946 0.86626 0.75226 0.85771 0.88162 0.87836 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -4.48 12.88 -148.98 -1.92 -6.40 16 2 C -0.06 -0.24 3.06 71.24 0.22 -0.02 16 3 Si 0.79 -1.80 30.82 68.60 2.11 0.32 16 4 C -0.22 -0.59 5.58 -18.61 -0.10 -0.69 16 5 C 0.08 -0.36 10.43 82.98 0.87 0.51 16 6 N -0.57 3.08 6.05 -187.48 -1.13 1.95 16 7 C 0.11 0.09 7.27 39.19 0.28 0.38 16 8 C -0.13 0.30 10.00 22.09 0.22 0.52 16 9 C -0.07 0.03 9.46 22.30 0.21 0.25 16 10 C -0.18 -1.30 5.87 -20.09 -0.12 -1.41 16 11 C 0.57 5.44 6.18 86.73 0.54 5.97 16 12 O -0.57 -10.61 14.57 -3.98 -0.06 -10.66 16 13 N -0.68 -1.14 3.62 -426.93 -1.55 -2.69 16 14 C 0.19 0.16 0.97 3.38 0.00 0.16 16 15 C -0.06 -0.23 5.06 -19.86 -0.10 -0.33 16 16 C -0.11 -0.11 8.42 22.26 0.19 0.08 16 17 C -0.09 -0.28 9.79 22.28 0.22 -0.06 16 18 C -0.11 -0.65 6.22 22.31 0.14 -0.51 16 19 Br -0.06 -0.33 33.70 -20.37 -0.69 -1.02 16 20 C -0.10 -0.67 9.79 22.29 0.22 -0.45 16 21 C -0.11 -0.68 9.00 22.27 0.20 -0.48 16 22 C -0.14 -0.43 6.53 31.12 0.20 -0.23 16 23 C 0.09 -0.32 5.27 31.12 0.16 -0.15 16 24 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 25 O -0.56 0.95 13.09 -148.98 -1.95 -1.00 16 26 C -0.14 0.95 7.11 31.12 0.22 1.17 16 27 C -0.02 -0.26 9.64 22.74 0.22 -0.04 16 28 C -0.13 -0.89 6.34 -20.21 -0.13 -1.01 16 29 H 0.38 0.30 8.70 -74.06 -0.64 -0.34 16 30 H 0.10 0.58 7.96 -2.38 -0.02 0.56 16 31 H -0.31 -2.16 7.11 99.48 0.71 -1.45 16 32 H -0.26 0.66 7.00 99.48 0.70 1.36 16 33 H 0.21 -2.40 6.27 -2.91 -0.02 -2.42 16 34 H 0.44 -5.50 8.96 -92.71 -0.83 -6.33 16 35 H 0.16 -1.50 8.06 -2.91 -0.02 -1.53 16 36 H 0.16 -1.18 6.38 -2.91 -0.02 -1.20 16 37 H 0.41 -1.78 6.77 -92.71 -0.63 -2.41 16 38 H 0.16 -0.81 6.74 -2.91 -0.02 -0.83 16 39 H 0.15 -0.07 8.06 -2.91 -0.02 -0.10 16 40 H 0.13 0.67 8.06 -2.91 -0.02 0.65 16 41 H 0.12 0.76 6.53 -2.91 -0.02 0.74 16 42 H 0.05 0.64 6.67 -2.39 -0.02 0.63 16 43 H 0.12 -0.01 6.66 -2.39 -0.02 -0.02 16 44 H 0.40 -4.25 9.12 -74.06 -0.68 -4.93 16 45 H 0.12 -1.19 7.29 -2.39 -0.02 -1.21 16 46 H 0.10 -0.94 8.13 -2.39 -0.02 -0.96 16 47 H 0.10 1.72 7.64 -2.91 -0.02 1.69 16 Total: 0.00 -31.52 406.99 -3.17 -34.69 By element: Atomic # 1 Polarization: -17.18 SS G_CDS: -1.65 Total: -18.83 kcal Atomic # 6 Polarization: -0.02 SS G_CDS: 3.66 Total: 3.64 kcal Atomic # 7 Polarization: 1.94 SS G_CDS: -2.68 Total: -0.74 kcal Atomic # 8 Polarization: -14.14 SS G_CDS: -3.93 Total: -18.07 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: 2.11 Total: 0.32 kcal Atomic # 35 Polarization: -0.33 SS G_CDS: -0.69 Total: -1.02 kcal Total: -31.52 -3.17 -34.69 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.676 kcal (2) G-P(sol) polarization free energy of solvation -31.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.155 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.171 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.692 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds