Wall clock time and date at job start Sat Mar 6 2021 23:43:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86296 * 109.47564 * 2 1 4 4 C 1.50704 * 109.46758 * 240.00035 * 2 1 3 5 5 C 1.38566 * 120.32454 * 120.00007 * 4 2 1 6 6 N 1.31522 * 120.90737 * 180.02562 * 5 4 2 7 7 C 1.32720 * 121.63926 * 0.02562 * 6 5 4 8 8 C 1.48168 * 119.72290 * 179.97438 * 7 6 5 9 9 O 1.21504 * 120.00031 * 180.02562 * 8 7 6 10 10 N 1.34780 * 119.99698 * 359.97438 * 8 7 6 11 11 C 1.46501 * 119.99958 * 175.00682 * 10 8 7 12 12 C 1.50698 * 112.84666 * 65.10509 * 11 10 8 13 13 C 1.38243 * 119.99093 * 197.59759 * 12 11 10 14 14 C 1.38217 * 120.01238 * 179.76713 * 13 12 11 15 15 C 1.38335 * 119.98524 * 0.50439 * 14 13 12 16 16 Br 1.89101 * 120.00679 * 179.76551 * 15 14 13 17 17 C 1.38323 * 119.97974 * 359.74663 * 15 14 13 18 18 C 1.38214 * 119.99107 * 359.97438 * 17 15 14 19 19 C 1.53781 * 113.61580 * 293.91213 * 11 10 8 20 20 C 1.53781 * 87.07835 * 270.87829 * 19 11 10 21 21 H 1.08998 * 113.61866 * 219.93524 * 20 19 11 22 22 O 1.42907 * 113.61250 * 89.11719 * 20 19 11 23 23 C 1.53776 * 113.61747 * 196.30008 * 11 10 8 24 24 C 1.39308 * 120.55450 * 359.97438 * 7 6 5 25 25 C 1.38596 * 119.05957 * 359.72550 * 24 7 6 26 26 H 0.96701 * 114.00589 * 59.99588 * 1 2 3 27 27 H 1.08995 * 109.47425 * 120.00321 * 2 1 3 28 28 H 1.48502 * 110.00006 * 59.99811 * 3 2 1 29 29 H 1.48499 * 110.00579 * 181.32199 * 3 2 1 30 30 H 1.08009 * 119.54452 * 359.97438 * 5 4 2 31 31 H 0.96998 * 120.00035 * 355.01797 * 10 8 7 32 32 H 1.08003 * 119.99444 * 0.02562 * 13 12 11 33 33 H 1.07994 * 120.00913 * 180.22899 * 14 13 12 34 34 H 1.08001 * 119.99896 * 180.02562 * 17 15 14 35 35 H 1.07999 * 119.99260 * 180.02562 * 18 17 15 36 36 H 1.08999 * 113.61778 * 25.42378 * 19 11 10 37 37 H 1.08997 * 113.61503 * 156.24974 * 19 11 10 38 38 H 0.96700 * 114.00010 * 179.97438 * 22 20 19 39 39 H 1.09000 * 113.61683 * 203.67193 * 23 11 10 40 40 H 1.09002 * 113.61287 * 334.56964 * 23 11 10 41 41 H 1.07995 * 120.47052 * 179.97438 * 24 7 6 42 42 H 1.07998 * 120.75359 * 180.29542 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7282 -0.0435 -2.1471 6 7 3.1724 -0.6522 -3.2250 7 6 2.8781 -1.9212 -3.4792 8 6 3.4010 -2.5648 -4.7071 9 8 3.1343 -3.7261 -4.9450 10 7 4.1716 -1.8618 -5.5606 11 6 4.7784 -2.5262 -6.7167 12 6 3.7582 -3.0220 -7.7088 13 6 4.1136 -3.9698 -8.6503 14 6 3.1769 -4.4284 -9.5573 15 6 1.8863 -3.9311 -9.5295 16 35 0.6061 -4.5533 -10.7744 17 6 1.5326 -2.9790 -8.5906 18 6 2.4684 -2.5252 -7.6803 19 6 5.8325 -3.5800 -6.3384 20 6 6.8686 -2.4443 -6.3801 21 1 7.8194 -2.7367 -6.8257 22 8 7.0259 -1.7669 -5.1317 23 6 5.9221 -1.7232 -7.3585 24 6 2.0817 -2.6530 -2.6013 25 6 1.6047 -2.0390 -1.4540 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8899 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7702 -0.0322 30 1 2.9875 0.9906 -1.9743 31 1 4.3245 -0.9159 -5.4093 32 1 5.1223 -4.3551 -8.6744 33 1 3.4536 -5.1715 -10.2904 34 1 0.5250 -2.5908 -8.5683 35 1 2.1921 -1.7821 -6.9469 36 1 5.6892 -4.0039 -5.3445 37 1 5.9848 -4.3400 -7.1047 38 1 7.6765 -1.0517 -5.1515 39 1 6.0998 -1.9756 -8.4039 40 1 5.8509 -0.6490 -7.1876 41 1 1.8427 -3.6854 -2.8097 42 1 0.9890 -2.5820 -0.7522 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_13287726.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:43:57 Heat of formation + Delta-G solvation = -0.166929 kcal Electronic energy + Delta-G solvation = -29734.221125 eV Core-core repulsion = 25500.728407 eV Total energy + Delta-G solvation = -4233.492718 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.041 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -42.31867 -41.49362 -39.68248 -39.30210 -37.95155 -36.34370 -34.42104 -33.43243 -33.09661 -32.91361 -31.90848 -30.24611 -27.98419 -27.10889 -25.66080 -25.00935 -24.03976 -23.61485 -22.50247 -21.86677 -20.27449 -19.36877 -18.72564 -18.57229 -17.96741 -17.60562 -16.92559 -16.72223 -16.47690 -16.36698 -16.06992 -16.02312 -15.82938 -15.47116 -15.33478 -14.85741 -14.59136 -14.47187 -14.40097 -14.25597 -14.16767 -13.76435 -13.56729 -13.45845 -13.03089 -12.68271 -12.64947 -12.37169 -12.20395 -12.16034 -11.67291 -11.50116 -11.19870 -11.16364 -11.07629 -11.05553 -10.69179 -10.60781 -10.28345 -10.03827 -9.97622 -9.46413 -5.19302 -0.55752 0.06318 0.08943 0.35520 0.73394 1.08897 1.47555 1.66276 1.83818 1.92236 2.55814 2.71645 2.90472 2.97336 3.23950 3.31065 3.42442 3.47152 3.55768 3.60880 3.68396 3.72770 3.86956 3.92917 3.93489 4.13498 4.20635 4.29507 4.33039 4.42912 4.49405 4.52784 4.60454 4.65840 4.75633 4.82405 4.86037 4.94337 4.96213 4.99085 5.21127 5.24716 5.34567 5.36761 5.64423 5.81128 6.34319 6.37789 6.57655 6.65169 7.19048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.688 3.312 4 C -0.151 4.151 5 C 0.102 3.898 6 N -0.450 5.450 7 C 0.083 3.917 8 C 0.575 3.425 9 O -0.516 6.516 10 N -0.681 5.681 11 C 0.195 3.805 12 C -0.054 4.054 13 C -0.107 4.107 14 C -0.087 4.087 15 C -0.091 4.091 16 Br -0.051 7.051 17 C -0.087 4.087 18 C -0.094 4.094 19 C -0.132 4.132 20 C 0.081 3.919 21 H 0.076 0.924 22 O -0.544 6.544 23 C -0.162 4.162 24 C -0.109 4.109 25 C -0.053 4.053 26 H 0.381 0.619 27 H 0.120 0.880 28 H -0.249 1.249 29 H -0.252 1.252 30 H 0.163 0.837 31 H 0.415 0.585 32 H 0.133 0.867 33 H 0.134 0.866 34 H 0.131 0.869 35 H 0.124 0.876 36 H 0.087 0.913 37 H 0.109 0.891 38 H 0.382 0.618 39 H 0.108 0.892 40 H 0.086 0.914 41 H 0.152 0.848 42 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.702 4.777 -0.842 5.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.178 4.178 3 Si 0.589 3.411 4 C -0.153 4.153 5 C -0.057 4.057 6 N -0.161 5.161 7 C -0.055 4.055 8 C 0.360 3.640 9 O -0.390 6.390 10 N -0.332 5.332 11 C 0.108 3.892 12 C -0.056 4.056 13 C -0.127 4.127 14 C -0.107 4.107 15 C -0.171 4.171 16 Br 0.034 6.966 17 C -0.107 4.107 18 C -0.113 4.113 19 C -0.170 4.170 20 C 0.021 3.979 21 H 0.094 0.906 22 O -0.349 6.349 23 C -0.200 4.200 24 C -0.129 4.129 25 C -0.079 4.079 26 H 0.229 0.771 27 H 0.138 0.862 28 H -0.174 1.174 29 H -0.177 1.177 30 H 0.180 0.820 31 H 0.253 0.747 32 H 0.151 0.849 33 H 0.152 0.848 34 H 0.149 0.851 35 H 0.142 0.858 36 H 0.106 0.894 37 H 0.127 0.873 38 H 0.229 0.771 39 H 0.126 0.874 40 H 0.104 0.896 41 H 0.169 0.831 42 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 2.696 3.987 -0.931 4.902 hybrid contribution 0.225 -0.104 1.014 1.044 sum 2.920 3.883 0.083 4.859 Atomic orbital electron populations 1.86535 1.16609 1.81655 1.49344 1.25048 0.85586 1.10424 0.96772 0.94779 0.81172 0.77282 0.87862 1.21652 0.99230 0.96030 0.98402 1.22616 0.94079 0.99655 0.89361 1.67526 1.19820 1.09188 1.19524 1.21157 0.97648 0.90738 0.95980 1.17801 0.78399 0.85780 0.82008 1.90841 1.57727 1.16088 1.74380 1.45301 1.49659 1.13767 1.24516 1.19899 0.89665 0.94769 0.84891 1.19851 0.94459 0.96028 0.95242 1.20922 0.99822 0.96908 0.94999 1.21079 0.91336 0.99274 0.98981 1.21824 0.94542 1.01968 0.98725 1.96764 1.55099 1.88060 1.56668 1.21092 1.00114 0.95644 0.93839 1.20883 0.92497 0.99844 0.98097 1.23540 0.93032 0.96022 1.04364 1.22753 0.97062 0.93415 0.84673 0.90613 1.86539 1.65026 1.51996 1.31331 1.24088 0.94514 1.00793 1.00570 1.22221 0.95325 1.02076 0.93308 1.21543 0.96467 0.93624 0.96283 0.77144 0.86222 1.17377 1.17714 0.82001 0.74722 0.84913 0.84782 0.85063 0.85815 0.89433 0.87319 0.77083 0.87368 0.89573 0.83060 0.83509 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.72 12.78 -35.23 -0.45 0.27 16 2 C -0.07 0.12 2.83 36.01 0.10 0.23 16 3 Si 0.69 -1.82 29.82 -169.99 -5.07 -6.89 16 4 C -0.15 0.15 5.40 -104.36 -0.56 -0.41 16 5 C 0.10 -0.08 9.84 -17.56 -0.17 -0.25 16 6 N -0.45 -0.40 9.55 -9.79 -0.09 -0.50 16 7 C 0.08 0.16 6.75 -83.01 -0.56 -0.40 16 8 C 0.58 1.63 6.38 -12.18 -0.08 1.56 16 9 O -0.52 -2.85 14.82 5.36 0.08 -2.77 16 10 N -0.68 -0.44 3.79 -48.76 -0.18 -0.62 16 11 C 0.20 -0.01 0.92 -132.16 -0.12 -0.13 16 12 C -0.05 -0.06 4.51 -104.62 -0.47 -0.53 16 13 C -0.11 -0.04 8.94 -39.59 -0.35 -0.40 16 14 C -0.09 -0.10 9.79 -39.55 -0.39 -0.49 16 15 C -0.09 -0.20 6.22 -39.51 -0.25 -0.45 16 16 Br -0.05 -0.11 33.70 -68.01 -2.29 -2.40 16 17 C -0.09 -0.18 9.79 -39.56 -0.39 -0.57 16 18 C -0.09 -0.18 8.64 -39.59 -0.34 -0.52 16 19 C -0.13 -0.01 6.66 -25.92 -0.17 -0.18 16 20 C 0.08 -0.15 5.28 -25.78 -0.14 -0.29 16 21 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 22 O -0.54 0.45 13.09 -35.23 -0.46 -0.01 16 23 C -0.16 0.41 7.15 -25.78 -0.18 0.22 16 24 C -0.11 -0.12 9.63 -39.05 -0.38 -0.50 16 25 C -0.05 0.02 9.77 -39.31 -0.38 -0.37 16 26 H 0.38 -1.95 8.70 45.56 0.40 -1.55 16 27 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 28 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 29 H -0.25 0.11 7.11 56.52 0.40 0.51 16 30 H 0.16 -0.51 4.89 -52.48 -0.26 -0.77 16 31 H 0.42 -0.17 8.00 -40.82 -0.33 -0.50 16 32 H 0.13 -0.26 6.29 -52.48 -0.33 -0.59 16 33 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 34 H 0.13 0.12 8.06 -52.49 -0.42 -0.30 16 35 H 0.12 0.18 6.89 -52.49 -0.36 -0.19 16 36 H 0.09 0.26 7.57 -51.93 -0.39 -0.13 16 37 H 0.11 -0.17 6.02 -51.93 -0.31 -0.48 16 38 H 0.38 -1.82 9.12 45.56 0.42 -1.40 16 39 H 0.11 -0.38 7.93 -51.93 -0.41 -0.79 16 40 H 0.09 -0.27 8.09 -51.93 -0.42 -0.69 16 41 H 0.15 0.14 7.64 -52.49 -0.40 -0.26 16 42 H 0.15 -0.23 8.06 -52.49 -0.42 -0.65 16 LS Contribution 371.69 15.07 5.60 5.60 Total: 0.00 -8.69 371.69 -11.41 -20.10 By element: Atomic # 1 Polarization: -5.61 SS G_CDS: -3.70 Total: -9.32 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -4.84 Total: -3.47 kcal Atomic # 7 Polarization: -0.84 SS G_CDS: -0.28 Total: -1.12 kcal Atomic # 8 Polarization: -1.67 SS G_CDS: -0.83 Total: -2.51 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.07 Total: -6.89 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.29 Total: -2.40 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -8.69 -11.41 -20.10 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13287726.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.933 kcal (2) G-P(sol) polarization free energy of solvation -8.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.242 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.100 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.167 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds