Wall clock time and date at job start Sat Mar 6 2021 23:43:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86296 * 109.47564 * 2 1 4 4 C 1.50704 * 109.46758 * 240.00035 * 2 1 3 5 5 C 1.38566 * 120.32454 * 120.00007 * 4 2 1 6 6 N 1.31522 * 120.90737 * 180.02562 * 5 4 2 7 7 C 1.32720 * 121.63926 * 0.02562 * 6 5 4 8 8 C 1.48168 * 119.72290 * 179.97438 * 7 6 5 9 9 O 1.21504 * 120.00031 * 180.02562 * 8 7 6 10 10 N 1.34780 * 119.99698 * 359.97438 * 8 7 6 11 11 C 1.46501 * 119.99958 * 175.00682 * 10 8 7 12 12 C 1.50698 * 112.84666 * 65.10509 * 11 10 8 13 13 C 1.38243 * 119.99093 * 197.59759 * 12 11 10 14 14 C 1.38217 * 120.01238 * 179.76713 * 13 12 11 15 15 C 1.38335 * 119.98524 * 0.50439 * 14 13 12 16 16 Br 1.89101 * 120.00679 * 179.76551 * 15 14 13 17 17 C 1.38323 * 119.97974 * 359.74663 * 15 14 13 18 18 C 1.38214 * 119.99107 * 359.97438 * 17 15 14 19 19 C 1.53781 * 113.61580 * 293.91213 * 11 10 8 20 20 C 1.53781 * 87.07835 * 270.87829 * 19 11 10 21 21 H 1.08998 * 113.61866 * 219.93524 * 20 19 11 22 22 O 1.42907 * 113.61250 * 89.11719 * 20 19 11 23 23 C 1.53776 * 113.61747 * 196.30008 * 11 10 8 24 24 C 1.39308 * 120.55450 * 359.97438 * 7 6 5 25 25 C 1.38596 * 119.05957 * 359.72550 * 24 7 6 26 26 H 0.96701 * 114.00589 * 59.99588 * 1 2 3 27 27 H 1.08995 * 109.47425 * 120.00321 * 2 1 3 28 28 H 1.48502 * 110.00006 * 59.99811 * 3 2 1 29 29 H 1.48499 * 110.00579 * 181.32199 * 3 2 1 30 30 H 1.08009 * 119.54452 * 359.97438 * 5 4 2 31 31 H 0.96998 * 120.00035 * 355.01797 * 10 8 7 32 32 H 1.08003 * 119.99444 * 0.02562 * 13 12 11 33 33 H 1.07994 * 120.00913 * 180.22899 * 14 13 12 34 34 H 1.08001 * 119.99896 * 180.02562 * 17 15 14 35 35 H 1.07999 * 119.99260 * 180.02562 * 18 17 15 36 36 H 1.08999 * 113.61778 * 25.42378 * 19 11 10 37 37 H 1.08997 * 113.61503 * 156.24974 * 19 11 10 38 38 H 0.96700 * 114.00010 * 179.97438 * 22 20 19 39 39 H 1.09000 * 113.61683 * 203.67193 * 23 11 10 40 40 H 1.09002 * 113.61287 * 334.56964 * 23 11 10 41 41 H 1.07995 * 120.47052 * 179.97438 * 24 7 6 42 42 H 1.07998 * 120.75359 * 180.29542 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7282 -0.0435 -2.1471 6 7 3.1724 -0.6522 -3.2250 7 6 2.8781 -1.9212 -3.4792 8 6 3.4010 -2.5648 -4.7071 9 8 3.1343 -3.7261 -4.9450 10 7 4.1716 -1.8618 -5.5606 11 6 4.7784 -2.5262 -6.7167 12 6 3.7582 -3.0220 -7.7088 13 6 4.1136 -3.9698 -8.6503 14 6 3.1769 -4.4284 -9.5573 15 6 1.8863 -3.9311 -9.5295 16 35 0.6061 -4.5533 -10.7744 17 6 1.5326 -2.9790 -8.5906 18 6 2.4684 -2.5252 -7.6803 19 6 5.8325 -3.5800 -6.3384 20 6 6.8686 -2.4443 -6.3801 21 1 7.8194 -2.7367 -6.8257 22 8 7.0259 -1.7669 -5.1317 23 6 5.9221 -1.7232 -7.3585 24 6 2.0817 -2.6530 -2.6013 25 6 1.6047 -2.0390 -1.4540 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8899 28 1 1.5615 2.4679 1.2085 29 1 3.5346 1.7702 -0.0322 30 1 2.9875 0.9906 -1.9743 31 1 4.3245 -0.9159 -5.4093 32 1 5.1223 -4.3551 -8.6744 33 1 3.4536 -5.1715 -10.2904 34 1 0.5250 -2.5908 -8.5683 35 1 2.1921 -1.7821 -6.9469 36 1 5.6892 -4.0039 -5.3445 37 1 5.9848 -4.3400 -7.1047 38 1 7.6765 -1.0517 -5.1515 39 1 6.0998 -1.9756 -8.4039 40 1 5.8509 -0.6490 -7.1876 41 1 1.8427 -3.6854 -2.8097 42 1 0.9890 -2.5820 -0.7522 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_13287726.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:43:56 Heat of formation + Delta-G solvation = -1.219854 kcal Electronic energy + Delta-G solvation = -29734.266784 eV Core-core repulsion = 25500.728407 eV Total energy + Delta-G solvation = -4233.538376 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.041 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.34141 -41.48076 -39.78098 -39.31290 -37.86281 -36.29721 -34.46350 -33.44727 -33.16748 -32.92488 -31.96749 -30.32769 -27.97239 -26.99709 -25.63127 -25.00077 -24.06283 -23.64992 -22.52041 -21.87816 -20.28580 -19.39624 -18.69043 -18.51713 -17.91621 -17.56821 -16.92318 -16.67526 -16.47855 -16.38598 -16.13083 -16.01655 -15.87804 -15.41289 -15.37285 -14.83797 -14.62628 -14.49261 -14.37817 -14.27129 -14.22500 -13.73350 -13.52810 -13.35453 -13.03077 -12.60299 -12.55534 -12.40493 -12.25545 -12.16227 -11.70553 -11.56884 -11.30851 -11.23870 -11.07896 -10.94198 -10.66662 -10.59707 -10.30159 -10.06695 -10.05242 -9.54838 -5.00871 -0.60000 0.00737 0.06602 0.27829 0.60740 1.24354 1.54906 1.63875 1.88369 1.97101 2.50078 2.66388 2.92395 3.12625 3.41320 3.42885 3.49957 3.52463 3.61964 3.66382 3.73529 3.76320 3.88311 3.88713 3.94288 4.12844 4.26222 4.36264 4.40117 4.40731 4.55706 4.59887 4.67996 4.80859 4.83615 4.86837 4.87755 4.95921 4.97230 5.01469 5.14847 5.17171 5.31513 5.36803 5.60180 5.75633 6.28937 6.61396 6.70666 6.92540 7.08164 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.070 4.070 3 Si 0.776 3.224 4 C -0.142 4.142 5 C 0.101 3.899 6 N -0.455 5.455 7 C 0.065 3.935 8 C 0.572 3.428 9 O -0.552 6.552 10 N -0.670 5.670 11 C 0.184 3.816 12 C -0.058 4.058 13 C -0.108 4.108 14 C -0.092 4.092 15 C -0.105 4.105 16 Br -0.057 7.057 17 C -0.099 4.099 18 C -0.106 4.106 19 C -0.139 4.139 20 C 0.087 3.913 21 H 0.097 0.903 22 O -0.566 6.566 23 C -0.147 4.147 24 C -0.119 4.119 25 C -0.054 4.054 26 H 0.397 0.603 27 H 0.118 0.882 28 H -0.296 1.296 29 H -0.277 1.277 30 H 0.187 0.813 31 H 0.420 0.580 32 H 0.159 0.841 33 H 0.148 0.852 34 H 0.134 0.866 35 H 0.121 0.879 36 H 0.052 0.948 37 H 0.123 0.877 38 H 0.398 0.602 39 H 0.125 0.875 40 H 0.095 0.905 41 H 0.145 0.855 42 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.741 5.817 -1.165 7.013 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.181 4.181 3 Si 0.681 3.319 4 C -0.145 4.145 5 C -0.059 4.059 6 N -0.166 5.166 7 C -0.072 4.072 8 C 0.357 3.643 9 O -0.430 6.430 10 N -0.321 5.321 11 C 0.097 3.903 12 C -0.059 4.059 13 C -0.127 4.127 14 C -0.112 4.112 15 C -0.185 4.185 16 Br 0.029 6.971 17 C -0.118 4.118 18 C -0.125 4.125 19 C -0.177 4.177 20 C 0.027 3.973 21 H 0.115 0.885 22 O -0.374 6.374 23 C -0.184 4.184 24 C -0.140 4.140 25 C -0.080 4.080 26 H 0.248 0.752 27 H 0.135 0.865 28 H -0.223 1.223 29 H -0.204 1.204 30 H 0.203 0.797 31 H 0.259 0.741 32 H 0.176 0.824 33 H 0.166 0.834 34 H 0.152 0.848 35 H 0.139 0.861 36 H 0.071 0.929 37 H 0.141 0.859 38 H 0.248 0.752 39 H 0.143 0.857 40 H 0.114 0.886 41 H 0.163 0.837 42 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 3.742 5.045 -1.290 6.412 hybrid contribution -0.114 -0.396 1.220 1.288 sum 3.628 4.648 -0.069 5.897 Atomic orbital electron populations 1.86505 1.16678 1.82117 1.50578 1.25188 0.85633 1.11101 0.96147 0.93749 0.78155 0.74493 0.85505 1.21768 0.98562 0.95673 0.98487 1.23030 0.93531 1.00588 0.88743 1.67526 1.20122 1.08698 1.20268 1.21122 0.98589 0.91405 0.96104 1.18011 0.78332 0.85468 0.82465 1.90807 1.59270 1.17555 1.75340 1.45269 1.48718 1.13847 1.24222 1.20145 0.89854 0.95675 0.84621 1.20068 0.94409 0.95976 0.95485 1.21211 1.00881 0.96304 0.94269 1.21329 0.91054 0.99417 0.99408 1.21943 0.95033 1.02512 0.98993 1.96740 1.55482 1.88104 1.56799 1.21201 1.00468 0.96016 0.94154 1.20957 0.93077 1.00302 0.98210 1.23636 0.94281 0.96927 1.02872 1.22752 0.97595 0.92418 0.84493 0.88491 1.86500 1.65941 1.52876 1.32107 1.24076 0.92299 1.00991 1.01072 1.22251 0.95767 1.01976 0.93957 1.21698 0.96348 0.94089 0.95876 0.75241 0.86455 1.22319 1.20384 0.79654 0.74138 0.82399 0.83431 0.84763 0.86065 0.92875 0.85855 0.75184 0.85724 0.88605 0.83743 0.82409 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.89 12.78 -148.98 -1.90 -0.02 16 2 C -0.07 0.31 2.83 71.24 0.20 0.51 16 3 Si 0.78 -4.63 29.82 68.60 2.05 -2.59 16 4 C -0.14 0.34 5.40 -19.69 -0.11 0.23 16 5 C 0.10 -0.21 9.84 84.82 0.83 0.63 16 6 N -0.46 -0.97 9.55 -184.90 -1.77 -2.73 16 7 C 0.07 0.34 6.75 41.91 0.28 0.62 16 8 C 0.57 4.28 6.38 86.88 0.55 4.84 16 9 O -0.55 -7.48 14.82 -3.73 -0.06 -7.53 16 10 N -0.67 -1.47 3.79 -426.47 -1.62 -3.09 16 11 C 0.18 0.02 0.92 3.38 0.00 0.02 16 12 C -0.06 -0.15 4.51 -19.86 -0.09 -0.24 16 13 C -0.11 -0.05 8.94 22.27 0.20 0.15 16 14 C -0.09 -0.22 9.79 22.29 0.22 -0.01 16 15 C -0.11 -0.55 6.22 22.31 0.14 -0.41 16 16 Br -0.06 -0.29 33.70 -20.37 -0.69 -0.97 16 17 C -0.10 -0.53 9.79 22.28 0.22 -0.32 16 18 C -0.11 -0.53 8.64 22.26 0.19 -0.34 16 19 C -0.14 -0.05 6.66 31.12 0.21 0.15 16 20 C 0.09 -0.41 5.28 31.21 0.16 -0.24 16 21 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 22 O -0.57 1.22 13.09 -148.98 -1.95 -0.73 16 23 C -0.15 0.94 7.15 31.21 0.22 1.16 16 24 C -0.12 -0.45 9.63 22.61 0.22 -0.23 16 25 C -0.05 0.01 9.77 22.45 0.22 0.23 16 26 H 0.40 -4.48 8.70 -74.06 -0.64 -5.12 16 27 H 0.12 -0.43 7.96 -2.39 -0.02 -0.45 16 28 H -0.30 -0.58 7.11 99.48 0.71 0.12 16 29 H -0.28 0.47 7.11 99.48 0.71 1.17 16 30 H 0.19 -1.42 4.89 -2.91 -0.01 -1.44 16 31 H 0.42 -0.14 8.00 -92.71 -0.74 -0.88 16 32 H 0.16 -0.85 6.29 -2.91 -0.02 -0.87 16 33 H 0.15 -0.15 8.06 -2.91 -0.02 -0.17 16 34 H 0.13 0.48 8.06 -2.91 -0.02 0.46 16 35 H 0.12 0.56 6.89 -2.91 -0.02 0.54 16 36 H 0.05 0.41 7.57 -2.39 -0.02 0.40 16 37 H 0.12 -0.44 6.02 -2.39 -0.01 -0.45 16 38 H 0.40 -4.18 9.12 -74.06 -0.68 -4.85 16 39 H 0.12 -1.17 7.93 -2.39 -0.02 -1.19 16 40 H 0.10 -0.76 8.09 -2.39 -0.02 -0.78 16 41 H 0.14 0.65 7.64 -2.91 -0.02 0.62 16 42 H 0.16 -0.46 8.06 -2.91 -0.02 -0.48 16 Total: 0.00 -21.99 371.69 -3.16 -25.15 By element: Atomic # 1 Polarization: -13.34 SS G_CDS: -0.90 Total: -14.24 kcal Atomic # 6 Polarization: 3.08 SS G_CDS: 3.68 Total: 6.76 kcal Atomic # 7 Polarization: -2.44 SS G_CDS: -3.38 Total: -5.82 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -3.91 Total: -8.28 kcal Atomic # 14 Polarization: -4.63 SS G_CDS: 2.05 Total: -2.59 kcal Atomic # 35 Polarization: -0.29 SS G_CDS: -0.69 Total: -0.97 kcal Total: -21.99 -3.16 -25.15 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13287726.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.929 kcal (2) G-P(sol) polarization free energy of solvation -21.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds