Wall clock time and date at job start Sat Mar 6 2021 23:44:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34652 * 124.85286 * 2 1 4 4 C 1.36765 * 108.39762 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.94253 * 179.97438 * 4 3 2 6 6 O 1.21627 * 119.99989 * 180.02562 * 5 4 3 7 7 N 1.34783 * 119.99987 * 0.29644 * 5 4 3 8 8 C 1.46496 * 119.99989 * 174.74051 * 7 5 4 9 9 C 1.50701 * 112.84940 * 65.09905 * 8 7 5 10 10 C 1.38246 * 119.98759 * 197.58205 * 9 8 7 11 11 C 1.38215 * 120.00619 * 179.76698 * 10 9 8 12 12 C 1.38329 * 119.99175 * 0.51157 * 11 10 9 13 13 Br 1.89102 * 120.01134 * 179.76752 * 12 11 10 14 14 C 1.38329 * 119.97640 * 359.74003 * 12 11 10 15 15 C 1.38210 * 119.98892 * 0.02562 * 14 12 11 16 16 C 1.53789 * 113.61303 * 293.90375 * 8 7 5 17 17 C 1.53777 * 87.07927 * 270.88315 * 16 8 7 18 18 H 1.09005 * 113.61640 * 219.93599 * 17 16 8 19 19 O 1.42903 * 113.61527 * 89.11964 * 17 16 8 20 20 C 1.53774 * 113.61429 * 196.29859 * 8 7 5 21 21 C 1.46689 * 106.11658 * 0.23011 * 4 3 2 22 22 C 1.34490 * 106.32937 * 359.62167 * 21 4 3 23 23 C 1.50696 * 125.57035 * 180.12352 * 22 21 4 24 24 O 1.42901 * 109.47131 * 210.29822 * 23 22 21 25 25 Si 1.86304 * 109.47217 * 330.29602 * 23 22 21 26 26 H 1.08999 * 109.47300 * 90.01739 * 1 2 3 27 27 H 1.09000 * 109.47358 * 210.01847 * 1 2 3 28 28 H 1.09004 * 109.46931 * 330.01897 * 1 2 3 29 29 H 1.08002 * 125.80302 * 0.02562 * 3 2 1 30 30 H 0.96999 * 119.99680 * 354.74103 * 7 5 4 31 31 H 1.08003 * 119.99833 * 0.02562 * 10 9 8 32 32 H 1.08000 * 120.00615 * 180.23152 * 11 10 9 33 33 H 1.07999 * 119.99994 * 179.97438 * 14 12 11 34 34 H 1.08010 * 119.99250 * 179.97438 * 15 14 12 35 35 H 1.08994 * 113.61551 * 25.43702 * 16 8 7 36 36 H 1.09003 * 113.61449 * 156.33843 * 16 8 7 37 37 H 0.96702 * 114.00072 * 179.97438 * 19 17 16 38 38 H 1.09010 * 113.61753 * 203.66578 * 20 8 7 39 39 H 1.09005 * 113.61420 * 334.56273 * 20 8 7 40 40 H 1.07999 * 126.83348 * 179.77281 * 21 4 3 41 41 H 1.08996 * 109.47190 * 90.29321 * 23 22 21 42 42 H 0.96702 * 113.99683 * 60.00110 * 24 23 22 43 43 H 1.48509 * 109.99688 * 58.68200 * 25 23 22 44 44 H 1.48498 * 110.00237 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5461 0.7176 0.0006 5 6 4.7284 1.5956 0.0003 6 8 5.8446 1.1126 0.0004 7 7 4.5734 2.9345 0.0053 8 6 5.7445 3.8070 0.1213 9 6 6.6709 3.7035 -1.0628 10 6 7.9717 4.1611 -0.9644 11 6 8.8231 4.0620 -2.0487 12 6 8.3704 3.5145 -3.2356 13 35 9.5329 3.3846 -4.7214 14 6 7.0672 3.0615 -3.3350 15 6 6.2180 3.1566 -2.2488 16 6 6.4626 3.6972 1.4768 17 6 5.5210 4.8056 1.9765 18 1 6.0104 5.5376 2.6190 19 8 4.2985 4.3125 2.5284 20 6 5.3983 5.2545 0.5080 21 6 3.5375 -0.7493 -0.0047 22 6 2.2446 -1.1198 0.0005 23 6 1.7396 -2.5396 0.0006 24 8 0.4810 -2.5976 -0.6735 25 14 2.9650 -3.6347 -0.8770 26 1 -0.3634 -0.0003 -1.0276 27 1 -0.3634 -0.8898 0.5141 28 1 -0.3633 0.8902 0.5136 29 1 1.8767 2.1240 0.0004 30 1 3.6864 3.3203 -0.0678 31 1 8.3239 4.5924 -0.0390 32 1 9.8405 4.4161 -1.9707 33 1 6.7132 2.6343 -4.2616 34 1 5.2003 2.8033 -2.3265 35 1 6.3121 2.7392 1.9744 36 1 7.5099 3.9972 1.4417 37 1 3.7022 5.0049 2.8447 38 1 6.1552 5.9795 0.2084 39 1 4.3891 5.5529 0.2239 40 1 4.3980 -1.4018 -0.0092 41 1 1.6176 -2.8818 1.0282 42 1 0.5147 -2.3067 -1.5952 43 1 4.2869 -3.5586 -0.2044 44 1 2.4790 -5.0378 -0.8833 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_13287730.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:44:01 Heat of formation + Delta-G solvation = 10.881626 kcal Electronic energy + Delta-G solvation = -30602.251869 eV Core-core repulsion = 26341.926774 eV Total energy + Delta-G solvation = -4260.325095 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 2.35 seconds Orbital eigenvalues (eV) -42.51014 -41.90350 -39.55131 -39.09339 -37.80564 -36.25093 -34.08718 -33.63040 -33.02304 -31.91309 -31.25804 -30.15052 -27.74435 -27.05659 -26.40989 -25.42359 -23.90633 -23.43215 -22.31850 -20.97651 -20.73457 -20.03720 -19.12927 -18.61306 -17.85928 -17.38977 -16.96487 -16.83171 -16.78330 -16.30791 -15.96740 -15.68431 -15.57858 -15.36677 -15.20158 -15.05313 -14.76728 -14.55488 -14.35024 -14.22323 -14.01910 -13.74618 -13.52275 -13.43774 -13.28751 -13.14348 -12.95723 -12.62799 -12.30572 -12.23227 -12.11351 -11.93973 -11.60151 -11.37419 -11.11383 -11.02662 -10.79471 -10.63778 -9.94685 -9.89911 -9.54927 -9.38543 -9.18058 -5.00091 0.16720 0.43114 0.79081 0.81671 1.07340 1.42839 1.65925 1.87021 2.04582 2.21937 2.63627 2.74492 2.98063 3.19666 3.36004 3.53463 3.54486 3.65416 3.71319 3.77304 3.82928 3.89624 4.00051 4.14145 4.19517 4.30936 4.37957 4.40892 4.48337 4.51242 4.53896 4.55653 4.61467 4.72272 4.82507 4.88694 4.95078 5.02165 5.03856 5.07764 5.29404 5.32135 5.46177 5.69519 5.79743 5.88976 5.99115 6.16622 6.34912 6.57541 6.71987 7.55290 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.067 3.933 2 N -0.425 5.425 3 C 0.052 3.948 4 C -0.223 4.223 5 C 0.594 3.406 6 O -0.529 6.529 7 N -0.703 5.703 8 C 0.200 3.800 9 C -0.052 4.052 10 C -0.109 4.109 11 C -0.088 4.088 12 C -0.092 4.092 13 Br -0.053 7.053 14 C -0.088 4.088 15 C -0.092 4.092 16 C -0.132 4.132 17 C 0.081 3.919 18 H 0.074 0.926 19 O -0.544 6.544 20 C -0.162 4.162 21 C -0.137 4.137 22 C -0.020 4.020 23 C -0.042 4.042 24 O -0.544 6.544 25 Si 0.713 3.287 26 H 0.077 0.923 27 H 0.098 0.902 28 H 0.080 0.920 29 H 0.169 0.831 30 H 0.400 0.600 31 H 0.132 0.868 32 H 0.133 0.867 33 H 0.131 0.869 34 H 0.125 0.875 35 H 0.088 0.912 36 H 0.106 0.894 37 H 0.379 0.621 38 H 0.106 0.894 39 H 0.083 0.917 40 H 0.151 0.849 41 H 0.117 0.883 42 H 0.379 0.621 43 H -0.251 1.251 44 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.074 4.906 -0.211 7.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.100 5.100 3 C -0.084 4.084 4 C -0.234 4.234 5 C 0.383 3.617 6 O -0.405 6.405 7 N -0.354 5.354 8 C 0.113 3.887 9 C -0.054 4.054 10 C -0.128 4.128 11 C -0.108 4.108 12 C -0.171 4.171 13 Br 0.032 6.968 14 C -0.107 4.107 15 C -0.111 4.111 16 C -0.170 4.170 17 C 0.021 3.979 18 H 0.092 0.908 19 O -0.349 6.349 20 C -0.200 4.200 21 C -0.161 4.161 22 C -0.129 4.129 23 C -0.153 4.153 24 O -0.349 6.349 25 Si 0.613 3.387 26 H 0.096 0.904 27 H 0.117 0.883 28 H 0.099 0.901 29 H 0.187 0.813 30 H 0.235 0.765 31 H 0.150 0.850 32 H 0.151 0.849 33 H 0.149 0.851 34 H 0.143 0.857 35 H 0.107 0.893 36 H 0.125 0.875 37 H 0.227 0.773 38 H 0.125 0.875 39 H 0.101 0.899 40 H 0.168 0.832 41 H 0.134 0.866 42 H 0.227 0.773 43 H -0.175 1.175 44 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -4.599 2.961 -0.258 5.476 hybrid contribution -1.236 1.176 0.973 1.964 sum -5.836 4.137 0.715 7.189 Atomic orbital electron populations 1.22253 0.76279 1.05013 1.03919 1.43458 1.06956 1.04907 1.54638 1.21894 0.90110 0.91687 1.04705 1.20277 0.91479 0.93803 1.17796 1.17335 0.88148 0.80969 0.75267 1.90813 1.25602 1.74980 1.49128 1.45327 1.08571 1.05225 1.76317 1.19779 0.86063 0.90761 0.92108 1.19873 0.94182 0.96951 0.94382 1.20921 0.92684 1.00664 0.98546 1.21062 1.00177 0.98174 0.91386 1.21806 0.95073 1.06352 0.93888 1.96752 1.62801 1.97573 1.39659 1.21090 0.91819 0.98360 0.99470 1.20886 0.99880 0.98299 0.91994 1.23530 0.98372 1.00584 0.94494 1.22761 0.86572 0.96237 0.92322 0.90764 1.86543 1.29890 1.37036 1.81406 1.24083 1.03716 0.94697 0.97540 1.21718 0.94924 0.93283 1.06155 1.20779 0.90578 0.89046 1.12474 1.24805 0.93555 0.94867 1.02042 1.86474 1.29820 1.89496 1.29157 0.94115 0.76883 0.77718 0.89981 0.90429 0.88294 0.90123 0.81339 0.76514 0.85041 0.84900 0.85109 0.85679 0.89316 0.87549 0.77325 0.87538 0.89877 0.83177 0.86570 0.77295 1.17543 1.17692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.23 9.81 59.85 0.59 0.36 16 2 N -0.42 0.34 3.09 -119.90 -0.37 -0.03 16 3 C 0.05 -0.04 10.83 -16.85 -0.18 -0.22 16 4 C -0.22 -0.50 6.29 -103.35 -0.65 -1.15 16 5 C 0.59 2.04 6.38 -12.59 -0.08 1.96 16 6 O -0.53 -3.89 15.47 5.25 0.08 -3.80 16 7 N -0.70 -0.13 3.79 -49.04 -0.19 -0.32 16 8 C 0.20 0.02 0.92 -132.16 -0.12 -0.10 16 9 C -0.05 -0.08 4.51 -104.62 -0.47 -0.55 16 10 C -0.11 -0.11 8.94 -39.59 -0.35 -0.46 16 11 C -0.09 -0.15 9.79 -39.56 -0.39 -0.54 16 12 C -0.09 -0.24 6.22 -39.51 -0.25 -0.49 16 13 Br -0.05 -0.13 33.70 -68.01 -2.29 -2.43 16 14 C -0.09 -0.21 9.79 -39.56 -0.39 -0.60 16 15 C -0.09 -0.20 8.64 -39.59 -0.34 -0.54 16 16 C -0.13 -0.08 6.66 -25.92 -0.17 -0.25 16 17 C 0.08 -0.14 5.28 -25.78 -0.14 -0.28 16 18 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 19 O -0.54 0.66 13.09 -35.23 -0.46 0.20 16 20 C -0.16 0.42 7.15 -25.78 -0.18 0.24 16 21 C -0.14 -0.36 9.49 -37.50 -0.36 -0.71 16 22 C -0.02 -0.01 6.14 -81.87 -0.50 -0.51 16 23 C -0.04 0.03 2.87 36.00 0.10 0.13 16 24 O -0.54 0.88 10.32 -35.23 -0.36 0.52 16 25 Si 0.71 -0.52 31.28 -169.99 -5.32 -5.84 16 26 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 27 H 0.10 -0.25 6.73 -51.93 -0.35 -0.60 16 28 H 0.08 -0.38 8.13 -51.93 -0.42 -0.80 16 29 H 0.17 -0.67 7.46 -52.49 -0.39 -1.06 16 30 H 0.40 -0.91 7.62 -40.82 -0.31 -1.22 16 31 H 0.13 -0.18 6.29 -52.48 -0.33 -0.51 16 32 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 33 H 0.13 0.16 8.06 -52.49 -0.42 -0.26 16 34 H 0.13 0.19 6.89 -52.48 -0.36 -0.17 16 35 H 0.09 0.34 7.57 -51.93 -0.39 -0.05 16 36 H 0.11 -0.09 6.02 -51.93 -0.31 -0.40 16 37 H 0.38 -2.01 9.12 45.56 0.42 -1.59 16 38 H 0.11 -0.35 7.93 -51.92 -0.41 -0.77 16 39 H 0.08 -0.30 8.09 -51.93 -0.42 -0.72 16 40 H 0.15 0.50 6.66 -52.49 -0.35 0.15 16 41 H 0.12 -0.02 7.96 -51.93 -0.41 -0.44 16 42 H 0.38 -1.87 8.70 45.56 0.40 -1.48 16 43 H -0.25 -0.56 6.78 56.52 0.38 -0.18 16 44 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 LS Contribution 381.91 15.07 5.76 5.76 Total: 0.00 -10.09 381.91 -11.60 -21.69 By element: Atomic # 1 Polarization: -7.45 SS G_CDS: -4.56 Total: -12.01 kcal Atomic # 6 Polarization: 0.15 SS G_CDS: -3.88 Total: -3.73 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.56 Total: -0.34 kcal Atomic # 8 Polarization: -2.35 SS G_CDS: -0.74 Total: -3.09 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.32 Total: -5.84 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -2.29 Total: -2.43 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.09 -11.60 -21.69 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13287730.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.572 kcal (2) G-P(sol) polarization free energy of solvation -10.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.482 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.600 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.690 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.882 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.35 seconds