Wall clock time and date at job start Sat Mar 6 2021 23:44:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34652 * 124.85286 * 2 1 4 4 C 1.36765 * 108.39762 * 179.97438 * 3 2 1 5 5 C 1.47264 * 126.94253 * 179.97438 * 4 3 2 6 6 O 1.21627 * 119.99989 * 180.02562 * 5 4 3 7 7 N 1.34783 * 119.99987 * 0.29644 * 5 4 3 8 8 C 1.46496 * 119.99989 * 174.74051 * 7 5 4 9 9 C 1.50701 * 112.84940 * 65.09905 * 8 7 5 10 10 C 1.38246 * 119.98759 * 197.58205 * 9 8 7 11 11 C 1.38215 * 120.00619 * 179.76698 * 10 9 8 12 12 C 1.38329 * 119.99175 * 0.51157 * 11 10 9 13 13 Br 1.89102 * 120.01134 * 179.76752 * 12 11 10 14 14 C 1.38329 * 119.97640 * 359.74003 * 12 11 10 15 15 C 1.38210 * 119.98892 * 0.02562 * 14 12 11 16 16 C 1.53789 * 113.61303 * 293.90375 * 8 7 5 17 17 C 1.53777 * 87.07927 * 270.88315 * 16 8 7 18 18 H 1.09005 * 113.61640 * 219.93599 * 17 16 8 19 19 O 1.42903 * 113.61527 * 89.11964 * 17 16 8 20 20 C 1.53774 * 113.61429 * 196.29859 * 8 7 5 21 21 C 1.46689 * 106.11658 * 0.23011 * 4 3 2 22 22 C 1.34490 * 106.32937 * 359.62167 * 21 4 3 23 23 C 1.50696 * 125.57035 * 180.12352 * 22 21 4 24 24 O 1.42901 * 109.47131 * 210.29822 * 23 22 21 25 25 Si 1.86304 * 109.47217 * 330.29602 * 23 22 21 26 26 H 1.08999 * 109.47300 * 90.01739 * 1 2 3 27 27 H 1.09000 * 109.47358 * 210.01847 * 1 2 3 28 28 H 1.09004 * 109.46931 * 330.01897 * 1 2 3 29 29 H 1.08002 * 125.80302 * 0.02562 * 3 2 1 30 30 H 0.96999 * 119.99680 * 354.74103 * 7 5 4 31 31 H 1.08003 * 119.99833 * 0.02562 * 10 9 8 32 32 H 1.08000 * 120.00615 * 180.23152 * 11 10 9 33 33 H 1.07999 * 119.99994 * 179.97438 * 14 12 11 34 34 H 1.08010 * 119.99250 * 179.97438 * 15 14 12 35 35 H 1.08994 * 113.61551 * 25.43702 * 16 8 7 36 36 H 1.09003 * 113.61449 * 156.33843 * 16 8 7 37 37 H 0.96702 * 114.00072 * 179.97438 * 19 17 16 38 38 H 1.09010 * 113.61753 * 203.66578 * 20 8 7 39 39 H 1.09005 * 113.61420 * 334.56273 * 20 8 7 40 40 H 1.07999 * 126.83348 * 179.77281 * 21 4 3 41 41 H 1.08996 * 109.47190 * 90.29321 * 23 22 21 42 42 H 0.96702 * 113.99683 * 60.00110 * 24 23 22 43 43 H 1.48509 * 109.99688 * 58.68200 * 25 23 22 44 44 H 1.48498 * 110.00237 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5461 0.7176 0.0006 5 6 4.7284 1.5956 0.0003 6 8 5.8446 1.1126 0.0004 7 7 4.5734 2.9345 0.0053 8 6 5.7445 3.8070 0.1213 9 6 6.6709 3.7035 -1.0628 10 6 7.9717 4.1611 -0.9644 11 6 8.8231 4.0620 -2.0487 12 6 8.3704 3.5145 -3.2356 13 35 9.5329 3.3846 -4.7214 14 6 7.0672 3.0615 -3.3350 15 6 6.2180 3.1566 -2.2488 16 6 6.4626 3.6972 1.4768 17 6 5.5210 4.8056 1.9765 18 1 6.0104 5.5376 2.6190 19 8 4.2985 4.3125 2.5284 20 6 5.3983 5.2545 0.5080 21 6 3.5375 -0.7493 -0.0047 22 6 2.2446 -1.1198 0.0005 23 6 1.7396 -2.5396 0.0006 24 8 0.4810 -2.5976 -0.6735 25 14 2.9650 -3.6347 -0.8770 26 1 -0.3634 -0.0003 -1.0276 27 1 -0.3634 -0.8898 0.5141 28 1 -0.3633 0.8902 0.5136 29 1 1.8767 2.1240 0.0004 30 1 3.6864 3.3203 -0.0678 31 1 8.3239 4.5924 -0.0390 32 1 9.8405 4.4161 -1.9707 33 1 6.7132 2.6343 -4.2616 34 1 5.2003 2.8033 -2.3265 35 1 6.3121 2.7392 1.9744 36 1 7.5099 3.9972 1.4417 37 1 3.7022 5.0049 2.8447 38 1 6.1552 5.9795 0.2084 39 1 4.3891 5.5529 0.2239 40 1 4.3980 -1.4018 -0.0092 41 1 1.6176 -2.8818 1.0282 42 1 0.5147 -2.3067 -1.5952 43 1 4.2869 -3.5586 -0.2044 44 1 2.4790 -5.0378 -0.8833 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_13287730.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:44:00 Heat of formation + Delta-G solvation = 9.756224 kcal Electronic energy + Delta-G solvation = -30602.300670 eV Core-core repulsion = 26341.926774 eV Total energy + Delta-G solvation = -4260.373896 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -42.52134 -41.89804 -39.66893 -39.16128 -37.72719 -36.19787 -34.17892 -33.57880 -33.12724 -32.00491 -31.26262 -30.26012 -27.63140 -26.96066 -26.40650 -25.40343 -23.97080 -23.51909 -22.32912 -21.03420 -20.69455 -20.08172 -19.08421 -18.58992 -17.79296 -17.32623 -16.95428 -16.89705 -16.75118 -16.34214 -16.04290 -15.72555 -15.50926 -15.36556 -15.19299 -15.10770 -14.76361 -14.63287 -14.42820 -14.30105 -14.08361 -13.71470 -13.46772 -13.27750 -13.22486 -13.03103 -12.98819 -12.55455 -12.35486 -12.21819 -12.18643 -12.11035 -11.66321 -11.39022 -11.28981 -10.92663 -10.83129 -10.75602 -10.04800 -10.01436 -9.58618 -9.49372 -9.20265 -5.02538 0.05174 0.31766 0.62926 0.78190 1.02368 1.38799 1.60570 1.87482 2.03936 2.21612 2.54705 2.59494 3.16012 3.33618 3.47708 3.54950 3.60702 3.71183 3.77026 3.81548 3.91837 3.92750 4.00378 4.29176 4.32374 4.37103 4.43451 4.44420 4.49665 4.54293 4.63736 4.71448 4.81281 4.84651 4.89237 4.91655 4.92929 4.96963 5.01469 5.05853 5.19988 5.20937 5.39284 5.62213 5.73956 5.80131 5.97127 6.25443 6.61471 6.69522 6.96473 7.42382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.421 5.421 3 C 0.077 3.923 4 C -0.258 4.258 5 C 0.591 3.409 6 O -0.582 6.582 7 N -0.686 5.686 8 C 0.190 3.810 9 C -0.057 4.057 10 C -0.112 4.112 11 C -0.095 4.095 12 C -0.107 4.107 13 Br -0.058 7.058 14 C -0.099 4.099 15 C -0.103 4.103 16 C -0.143 4.143 17 C 0.089 3.911 18 H 0.093 0.907 19 O -0.563 6.563 20 C -0.144 4.144 21 C -0.169 4.169 22 C -0.014 4.014 23 C -0.032 4.032 24 O -0.545 6.545 25 Si 0.782 3.218 26 H 0.097 0.903 27 H 0.091 0.909 28 H 0.100 0.900 29 H 0.208 0.792 30 H 0.413 0.587 31 H 0.155 0.845 32 H 0.145 0.855 33 H 0.135 0.865 34 H 0.127 0.873 35 H 0.048 0.952 36 H 0.116 0.884 37 H 0.398 0.602 38 H 0.120 0.880 39 H 0.101 0.899 40 H 0.127 0.873 41 H 0.114 0.886 42 H 0.396 0.604 43 H -0.302 1.302 44 H -0.283 1.283 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.398 7.183 0.023 11.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.095 5.095 3 C -0.061 4.061 4 C -0.268 4.268 5 C 0.382 3.618 6 O -0.462 6.462 7 N -0.338 5.338 8 C 0.103 3.897 9 C -0.058 4.058 10 C -0.131 4.131 11 C -0.115 4.115 12 C -0.186 4.186 13 Br 0.027 6.973 14 C -0.119 4.119 15 C -0.123 4.123 16 C -0.182 4.182 17 C 0.030 3.970 18 H 0.111 0.889 19 O -0.372 6.372 20 C -0.182 4.182 21 C -0.194 4.194 22 C -0.124 4.124 23 C -0.143 4.143 24 O -0.353 6.353 25 Si 0.688 3.312 26 H 0.116 0.884 27 H 0.110 0.890 28 H 0.119 0.881 29 H 0.224 0.776 30 H 0.251 0.749 31 H 0.172 0.828 32 H 0.163 0.837 33 H 0.153 0.847 34 H 0.145 0.855 35 H 0.067 0.933 36 H 0.134 0.866 37 H 0.248 0.752 38 H 0.138 0.862 39 H 0.119 0.881 40 H 0.145 0.855 41 H 0.131 0.869 42 H 0.246 0.754 43 H -0.229 1.229 44 H -0.210 1.210 Dipole moment (debyes) X Y Z Total from point charges -6.996 5.287 -0.044 8.769 hybrid contribution -0.528 0.411 0.945 1.158 sum -7.524 5.698 0.900 9.481 Atomic orbital electron populations 1.22489 0.74138 1.05690 1.05445 1.43692 1.08133 1.04283 1.53383 1.22350 0.88836 0.93140 1.01734 1.20316 0.92552 0.93472 1.20444 1.17592 0.87786 0.81968 0.74487 1.90775 1.27528 1.76025 1.51902 1.45164 1.09456 1.04241 1.74914 1.20002 0.85931 0.92617 0.91190 1.20126 0.94803 0.96328 0.94563 1.21206 0.92374 1.00355 0.99178 1.21303 1.00953 0.97981 0.91276 1.21928 0.95197 1.07239 0.94258 1.96726 1.62878 1.97647 1.39999 1.21222 0.92051 0.98713 0.99928 1.21000 1.00103 0.98742 0.92407 1.23625 0.99899 0.99660 0.94967 1.22703 0.86043 0.95025 0.93240 0.88877 1.86501 1.30411 1.38631 1.81615 1.24041 1.05137 0.92675 0.96323 1.21686 0.95375 0.93931 1.08397 1.20752 0.90043 0.89967 1.11613 1.24617 0.93785 0.94050 1.01891 1.86454 1.28760 1.89532 1.30531 0.93298 0.73527 0.75527 0.88897 0.88446 0.89030 0.88107 0.77556 0.74905 0.82779 0.83687 0.84694 0.85535 0.93321 0.86572 0.75191 0.86209 0.88090 0.85509 0.86879 0.75384 1.22937 1.21005 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.59 9.81 127.77 1.25 0.66 16 2 N -0.42 1.23 3.09 -533.25 -1.65 -0.41 16 3 C 0.08 -0.20 10.83 83.92 0.91 0.71 16 4 C -0.26 -1.46 6.29 -19.04 -0.12 -1.58 16 5 C 0.59 5.15 6.38 86.62 0.55 5.70 16 6 O -0.58 -10.56 15.47 -4.12 -0.06 -10.62 16 7 N -0.69 -0.40 3.79 -427.29 -1.62 -2.02 16 8 C 0.19 0.04 0.92 3.39 0.00 0.04 16 9 C -0.06 -0.21 4.51 -19.86 -0.09 -0.30 16 10 C -0.11 -0.24 8.94 22.27 0.20 -0.04 16 11 C -0.10 -0.38 9.79 22.29 0.22 -0.16 16 12 C -0.11 -0.69 6.22 22.31 0.14 -0.55 16 13 Br -0.06 -0.35 33.70 -20.37 -0.69 -1.03 16 14 C -0.10 -0.63 9.79 22.28 0.22 -0.41 16 15 C -0.10 -0.58 8.64 22.26 0.19 -0.39 16 16 C -0.14 -0.26 6.66 31.12 0.21 -0.05 16 17 C 0.09 -0.44 5.28 31.21 0.16 -0.27 16 18 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 19 O -0.56 2.09 13.09 -148.98 -1.95 0.14 16 20 C -0.14 1.03 7.15 31.21 0.22 1.25 16 21 C -0.17 -1.29 9.49 23.62 0.22 -1.07 16 22 C -0.01 -0.02 6.14 40.98 0.25 0.23 16 23 C -0.03 0.03 2.87 71.23 0.20 0.23 16 24 O -0.55 2.35 10.32 -148.98 -1.54 0.81 16 25 Si 0.78 0.38 31.28 68.60 2.15 2.53 16 26 H 0.10 -1.25 8.14 -2.39 -0.02 -1.27 16 27 H 0.09 -0.65 6.73 -2.39 -0.02 -0.66 16 28 H 0.10 -1.30 8.13 -2.38 -0.02 -1.32 16 29 H 0.21 -2.32 7.46 -2.91 -0.02 -2.34 16 30 H 0.41 -2.39 7.62 -92.71 -0.71 -3.09 16 31 H 0.15 -0.51 6.29 -2.91 -0.02 -0.53 16 32 H 0.15 0.10 8.06 -2.91 -0.02 0.08 16 33 H 0.14 0.57 8.06 -2.91 -0.02 0.54 16 34 H 0.13 0.55 6.89 -2.91 -0.02 0.53 16 35 H 0.05 0.50 7.57 -2.39 -0.02 0.48 16 36 H 0.12 -0.15 6.02 -2.39 -0.01 -0.16 16 37 H 0.40 -5.03 9.12 -74.06 -0.68 -5.71 16 38 H 0.12 -1.11 7.93 -2.38 -0.02 -1.13 16 39 H 0.10 -1.04 8.09 -2.38 -0.02 -1.06 16 40 H 0.13 1.45 6.66 -2.91 -0.02 1.43 16 41 H 0.11 0.01 7.96 -2.39 -0.02 0.00 16 42 H 0.40 -4.56 8.70 -74.06 -0.64 -5.20 16 43 H -0.30 -2.65 6.78 99.48 0.67 -1.98 16 44 H -0.28 -1.59 7.11 99.48 0.71 -0.88 16 Total: 0.00 -28.14 381.91 -1.54 -29.68 By element: Atomic # 1 Polarization: -22.15 SS G_CDS: -0.93 Total: -23.09 kcal Atomic # 6 Polarization: -0.74 SS G_CDS: 4.75 Total: 4.01 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -3.27 Total: -2.43 kcal Atomic # 8 Polarization: -6.12 SS G_CDS: -3.55 Total: -9.67 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: 2.15 Total: 2.53 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -0.69 Total: -1.03 kcal Total: -28.14 -1.54 -29.68 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13287730.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.441 kcal (2) G-P(sol) polarization free energy of solvation -28.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.542 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.685 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds