Wall clock time and date at job start Sat Mar 6 2021 23:44:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86293 * 109.46932 * 2 1 4 4 C 1.50699 * 109.46932 * 120.00096 * 2 1 3 5 5 C 1.38358 * 120.34678 * 64.72413 * 4 2 1 6 6 C 1.40029 * 118.28481 * 179.73491 * 5 4 2 7 7 C 1.47836 * 120.55966 * 180.28273 * 6 5 4 8 8 O 1.21553 * 119.99886 * 0.23553 * 7 6 5 9 9 N 1.34777 * 119.99748 * 180.23807 * 7 6 5 10 10 C 1.46505 * 119.99761 * 175.03851 * 9 7 6 11 11 C 1.50702 * 112.84952 * 291.21450 * 10 9 7 12 12 C 1.38239 * 119.99013 * 346.59531 * 11 10 9 13 13 C 1.38218 * 120.01045 * 179.76195 * 12 11 10 14 14 C 1.38332 * 119.98739 * 0.52118 * 13 12 11 15 15 Br 1.89098 * 120.00823 * 179.76299 * 14 13 12 16 16 C 1.38323 * 119.97893 * 359.73419 * 14 13 12 17 17 C 1.38221 * 119.99048 * 0.02562 * 16 14 13 18 18 C 1.53779 * 113.61408 * 159.90735 * 10 9 7 19 19 C 1.53782 * 87.08021 * 270.88378 * 18 10 9 20 20 H 1.08998 * 113.69092 * 220.00907 * 19 18 10 21 21 O 1.42902 * 113.61207 * 89.11665 * 19 18 10 22 22 C 1.53781 * 87.08359 * 334.56908 * 19 18 10 23 23 C 1.39531 * 118.88136 * 0.51643 * 6 5 4 24 24 N 1.31698 * 120.56300 * 359.74467 * 23 6 5 25 25 C 1.31923 * 121.88448 * 0.02562 * 24 23 6 26 26 H 0.96695 * 113.99841 * 300.00119 * 1 2 3 27 27 H 1.09001 * 109.46695 * 240.00029 * 2 1 3 28 28 H 1.48500 * 109.99906 * 178.68045 * 3 2 1 29 29 H 1.48504 * 110.00366 * 299.99828 * 3 2 1 30 30 H 1.07998 * 120.85843 * 359.97394 * 5 4 2 31 31 H 0.96998 * 120.00525 * 355.04116 * 9 7 6 32 32 H 1.07998 * 119.99245 * 0.02630 * 12 11 10 33 33 H 1.08003 * 120.00636 * 180.23115 * 13 12 11 34 34 H 1.08002 * 120.00263 * 179.97438 * 16 14 13 35 35 H 1.07999 * 119.99092 * 179.97438 * 17 16 14 36 36 H 1.08996 * 113.61634 * 25.43382 * 18 10 9 37 37 H 1.09005 * 113.61398 * 156.33969 * 18 10 9 38 38 H 0.96700 * 113.99893 * 82.50232 * 21 19 18 39 39 H 1.09003 * 113.60815 * 270.88716 * 22 19 18 40 40 H 1.08995 * 113.61545 * 139.98229 * 22 19 18 41 41 H 1.07999 * 119.71444 * 179.72557 * 23 6 5 42 42 H 1.07997 * 119.46342 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6837 -2.0600 1.4085 6 6 2.1752 -2.6779 2.5649 7 6 1.9452 -4.1187 2.8030 8 8 1.3285 -4.7783 1.9893 9 7 2.4193 -4.7008 3.9223 10 6 2.0994 -6.1010 4.2116 11 6 0.6452 -6.3120 4.5460 12 6 -0.1636 -5.2267 4.8273 13 6 -1.4986 -5.4194 5.1293 14 6 -2.0227 -6.6992 5.1606 15 35 -3.8474 -6.9639 5.5802 16 6 -1.2117 -7.7851 4.8842 17 6 0.1220 -7.5911 4.5775 18 6 3.0651 -6.7597 5.2107 19 6 3.9269 -7.1515 3.9988 20 1 4.3517 -8.1529 4.0688 21 8 4.8940 -6.1623 3.6404 22 6 2.6391 -7.0858 3.1610 23 6 2.8816 -1.9097 3.4912 24 7 3.0869 -0.6263 3.2790 25 6 2.6397 -0.0186 2.1968 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 3.5346 1.7703 0.0321 29 1 1.5615 2.4679 -1.2085 30 1 1.1289 -2.6232 0.6727 31 1 2.9722 -4.1929 4.5364 32 1 0.2466 -4.2279 4.8069 33 1 -2.1313 -4.5712 5.3454 34 1 -1.6204 -8.7845 4.9090 35 1 0.7553 -8.4390 4.3621 36 1 3.5508 -6.0506 5.8809 37 1 2.6355 -7.6134 5.7351 38 1 5.7062 -6.1985 4.1639 39 1 2.0930 -8.0286 3.1252 40 1 2.7808 -6.6399 2.1766 41 1 3.2629 -2.3716 4.3899 42 1 2.8303 1.0359 2.0627 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_13287814.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:44:17 Heat of formation + Delta-G solvation = -0.142153 kcal Electronic energy + Delta-G solvation = -29893.956349 eV Core-core repulsion = 25660.464705 eV Total energy + Delta-G solvation = -4233.491644 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.041 amu Computer time = 2.13 seconds Orbital eigenvalues (eV) -42.42439 -41.52249 -39.77162 -39.31910 -37.97645 -36.41811 -34.50640 -33.76513 -33.16317 -32.78800 -31.93325 -30.28924 -27.34027 -27.16094 -26.53008 -24.98971 -23.91107 -23.80983 -22.53239 -21.72744 -20.42634 -19.32979 -18.79093 -18.27549 -18.02594 -17.76319 -17.59682 -16.91791 -16.47808 -16.44321 -16.08383 -15.93463 -15.78363 -15.50835 -15.32851 -14.79164 -14.64862 -14.56956 -14.37558 -14.33910 -14.22106 -13.83567 -13.61172 -13.43274 -13.10220 -12.75823 -12.74005 -12.44470 -12.27542 -12.15774 -11.73715 -11.57093 -11.21387 -11.16913 -11.13829 -11.03198 -10.62816 -10.54844 -10.35756 -10.15218 -10.04975 -9.53685 -5.16616 -0.58104 -0.03112 0.01623 0.28110 0.68375 1.11723 1.51520 1.73395 1.80564 1.89230 2.48311 2.62780 2.88907 3.00365 3.26036 3.29383 3.36956 3.39564 3.49443 3.57661 3.60297 3.66760 3.73097 3.82815 3.86354 4.08580 4.13868 4.18961 4.27230 4.36112 4.41164 4.44328 4.53194 4.59174 4.68810 4.77323 4.82810 4.89941 4.90332 4.99217 5.14111 5.18209 5.24836 5.29881 5.56384 5.73927 6.32009 6.42428 6.51311 6.60981 7.09153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.064 4.064 3 Si 0.687 3.313 4 C -0.179 4.179 5 C 0.012 3.988 6 C -0.186 4.186 7 C 0.569 3.431 8 O -0.516 6.516 9 N -0.696 5.696 10 C 0.197 3.803 11 C -0.058 4.058 12 C -0.099 4.099 13 C -0.086 4.086 14 C -0.091 4.091 15 Br -0.049 7.049 16 C -0.086 4.086 17 C -0.107 4.107 18 C -0.162 4.162 19 C 0.080 3.920 20 H 0.076 0.924 21 O -0.545 6.545 22 C -0.130 4.130 23 C 0.140 3.860 24 N -0.477 5.477 25 C 0.129 3.871 26 H 0.380 0.620 27 H 0.120 0.880 28 H -0.253 1.253 29 H -0.248 1.248 30 H 0.151 0.849 31 H 0.404 0.596 32 H 0.124 0.876 33 H 0.132 0.868 34 H 0.135 0.865 35 H 0.134 0.866 36 H 0.085 0.915 37 H 0.108 0.892 38 H 0.382 0.618 39 H 0.107 0.893 40 H 0.093 0.907 41 H 0.160 0.840 42 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.527 0.537 4.783 5.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.176 4.176 3 Si 0.587 3.413 4 C -0.181 4.181 5 C -0.014 4.014 6 C -0.191 4.191 7 C 0.356 3.644 8 O -0.391 6.391 9 N -0.348 5.348 10 C 0.110 3.890 11 C -0.060 4.060 12 C -0.118 4.118 13 C -0.106 4.106 14 C -0.170 4.170 15 Br 0.036 6.964 16 C -0.106 4.106 17 C -0.126 4.126 18 C -0.200 4.200 19 C 0.020 3.980 20 H 0.094 0.906 21 O -0.351 6.351 22 C -0.168 4.168 23 C -0.018 4.018 24 N -0.185 5.185 25 C -0.027 4.027 26 H 0.228 0.772 27 H 0.137 0.863 28 H -0.177 1.177 29 H -0.173 1.173 30 H 0.169 0.831 31 H 0.240 0.760 32 H 0.142 0.858 33 H 0.150 0.850 34 H 0.153 0.847 35 H 0.151 0.849 36 H 0.103 0.897 37 H 0.127 0.873 38 H 0.229 0.771 39 H 0.125 0.875 40 H 0.112 0.888 41 H 0.177 0.823 42 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 2.963 0.902 3.563 4.721 hybrid contribution 0.669 -0.922 -0.120 1.145 sum 3.632 -0.020 3.443 5.004 Atomic orbital electron populations 1.86555 1.16626 1.81642 1.49239 1.25033 0.85583 1.10315 0.96647 0.94892 0.81204 0.77186 0.87990 1.21429 1.02030 0.95472 0.99213 1.21626 0.91746 0.93239 0.94830 1.21031 1.04728 0.94974 0.98391 1.17930 0.78887 0.86268 0.81354 1.90830 1.40004 1.64179 1.44100 1.45341 1.53634 1.11482 1.24340 1.19860 0.89935 0.81829 0.97395 1.19895 0.94743 0.93587 0.97771 1.20903 0.92933 0.98921 0.99024 1.21114 0.95546 0.95595 0.98350 1.21847 0.91672 0.96266 1.07260 1.96776 1.09288 1.97390 1.92933 1.21099 0.93302 0.98252 0.97935 1.20909 0.94878 0.96528 1.00247 1.24057 0.97120 1.01683 0.97102 1.22726 0.89297 0.91559 0.94410 0.90596 1.86525 1.29645 1.55834 1.63067 1.23519 0.93840 0.99512 0.99904 1.23019 0.92059 0.89489 0.97273 1.67711 1.19355 1.10512 1.20891 1.22862 0.91577 0.99832 0.88453 0.77244 0.86311 1.17721 1.17262 0.83093 0.75980 0.85762 0.84974 0.84696 0.84873 0.89681 0.87329 0.77086 0.87469 0.88833 0.82257 0.82049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.14 12.84 -35.23 -0.45 -0.31 16 2 C -0.06 0.06 2.82 36.01 0.10 0.16 16 3 Si 0.69 -1.40 29.83 -169.99 -5.07 -6.47 16 4 C -0.18 0.05 5.35 -104.53 -0.56 -0.51 16 5 C 0.01 0.01 9.38 -38.87 -0.36 -0.35 16 6 C -0.19 -0.14 5.89 -104.82 -0.62 -0.76 16 7 C 0.57 0.99 6.27 -12.33 -0.08 0.92 16 8 O -0.52 -2.74 14.84 5.32 0.08 -2.66 16 9 N -0.70 0.68 3.70 -48.86 -0.18 0.50 16 10 C 0.20 -0.18 0.94 -132.15 -0.12 -0.30 16 11 C -0.06 -0.02 4.89 -104.62 -0.51 -0.53 16 12 C -0.10 -0.11 8.98 -39.59 -0.36 -0.46 16 13 C -0.09 -0.13 9.79 -39.55 -0.39 -0.52 16 14 C -0.09 -0.16 6.22 -39.52 -0.25 -0.41 16 15 Br -0.05 -0.09 33.70 -68.01 -2.29 -2.38 16 16 C -0.09 -0.06 9.79 -39.56 -0.39 -0.45 16 17 C -0.11 0.02 8.71 -39.59 -0.34 -0.33 16 18 C -0.16 0.54 7.12 -25.92 -0.18 0.36 16 19 C 0.08 -0.19 5.28 -25.92 -0.14 -0.33 16 20 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 21 O -0.55 0.88 13.09 -35.23 -0.46 0.42 16 22 C -0.13 0.03 6.56 -25.92 -0.17 -0.14 16 23 C 0.14 -0.08 10.71 -17.13 -0.18 -0.27 16 24 N -0.48 -0.27 10.35 -12.91 -0.13 -0.41 16 25 C 0.13 -0.08 9.84 -17.47 -0.17 -0.25 16 26 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 27 H 0.12 -0.05 7.96 -51.93 -0.41 -0.47 16 28 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 29 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 30 H 0.15 0.31 7.74 -52.49 -0.41 -0.09 16 31 H 0.40 -1.34 6.77 -40.82 -0.28 -1.61 16 32 H 0.12 0.03 6.73 -52.49 -0.35 -0.32 16 33 H 0.13 0.05 8.06 -52.48 -0.42 -0.37 16 34 H 0.14 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.13 -0.33 6.55 -52.49 -0.34 -0.68 16 36 H 0.08 -0.36 8.10 -51.93 -0.42 -0.78 16 37 H 0.11 -0.45 7.79 -51.93 -0.40 -0.86 16 38 H 0.38 -2.12 9.12 45.56 0.42 -1.70 16 39 H 0.11 -0.17 6.22 -51.93 -0.32 -0.50 16 40 H 0.09 0.28 6.95 -51.93 -0.36 -0.08 16 41 H 0.16 -0.57 6.43 -52.49 -0.34 -0.91 16 42 H 0.16 -0.48 4.91 -52.49 -0.26 -0.74 16 LS Contribution 369.31 15.07 5.57 5.57 Total: 0.00 -9.81 369.31 -11.22 -21.03 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -3.55 Total: -11.11 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -4.72 Total: -4.16 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -0.31 Total: 0.09 kcal Atomic # 8 Polarization: -1.72 SS G_CDS: -0.83 Total: -2.55 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.07 Total: -6.47 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -2.29 Total: -2.38 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -9.81 -11.22 -21.03 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13287814.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.884 kcal (2) G-P(sol) polarization free energy of solvation -9.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.075 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.026 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.142 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.13 seconds