Wall clock time and date at job start Sat Mar 6 2021 23:44:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.36422 * 125.79699 * 2 1 4 4 C 1.47375 * 127.19210 * 0.06576 * 3 2 1 5 5 O 1.21610 * 120.00328 * 359.97438 * 4 3 2 6 6 N 1.34782 * 119.99848 * 179.97438 * 4 3 2 7 7 C 1.46496 * 119.99991 * 175.05095 * 6 4 3 8 8 C 1.50695 * 112.85044 * 291.22102 * 7 6 4 9 9 C 1.38246 * 119.99140 * 346.62396 * 8 7 6 10 10 C 1.38212 * 120.01351 * 179.76440 * 9 8 7 11 11 C 1.38331 * 119.98953 * 0.51400 * 10 9 8 12 12 Br 1.89097 * 120.01022 * 179.76352 * 11 10 9 13 13 C 1.38324 * 119.97827 * 359.73809 * 11 10 9 14 14 C 1.38222 * 119.98950 * 0.02562 * 13 11 10 15 15 C 1.53784 * 113.61685 * 159.91571 * 7 6 4 16 16 C 1.53782 * 87.07986 * 270.88350 * 15 7 6 17 17 H 1.09002 * 113.69149 * 220.00909 * 16 15 7 18 18 O 1.42894 * 113.61624 * 89.11281 * 16 15 7 19 19 C 1.53781 * 113.61719 * 62.41475 * 7 6 4 20 20 C 1.47023 * 105.61373 * 180.02562 * 3 2 1 21 21 C 1.34179 * 105.95260 * 359.97438 * 20 3 2 22 22 C 1.50699 * 125.43562 * 179.97438 * 21 20 3 23 23 O 1.42902 * 109.46981 * 64.99987 * 22 21 20 24 24 Si 1.86296 * 109.47280 * 184.99878 * 22 21 20 25 25 O 1.33644 * 125.80574 * 180.30116 * 2 1 3 26 26 H 1.08995 * 109.47028 * 90.00629 * 1 2 3 27 27 H 1.08996 * 109.46947 * 210.00120 * 1 2 3 28 28 H 1.08997 * 109.47801 * 330.00340 * 1 2 3 29 29 H 0.96996 * 119.99939 * 355.04022 * 6 4 3 30 30 H 1.08007 * 119.98968 * 0.02562 * 9 8 7 31 31 H 1.08007 * 120.00641 * 180.23360 * 10 9 8 32 32 H 1.08001 * 120.00395 * 179.97438 * 13 11 10 33 33 H 1.08003 * 119.99127 * 179.97438 * 14 13 11 34 34 H 1.08996 * 113.61363 * 25.42732 * 15 7 6 35 35 H 1.08995 * 113.61447 * 156.33794 * 15 7 6 36 36 H 0.96701 * 114.00030 * 82.50751 * 18 16 15 37 37 H 1.08998 * 113.62007 * 203.66674 * 19 7 6 38 38 H 1.09005 * 113.61653 * 334.49068 * 19 7 6 39 39 H 1.07998 * 127.02213 * 179.97438 * 20 3 2 40 40 H 1.08994 * 109.47369 * 305.00219 * 22 21 20 41 41 H 0.96708 * 114.00037 * 60.00095 * 23 22 21 42 42 H 1.48500 * 109.99788 * 58.68211 * 24 22 21 43 43 H 1.48502 * 110.00332 * 180.02562 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1065 0.0000 4 6 1.8738 2.5158 0.0013 5 8 0.6888 2.7892 0.0022 6 7 2.7928 3.5017 0.0017 7 6 2.3677 4.8994 -0.1064 8 6 1.7989 5.2350 -1.4610 9 6 1.9725 4.3621 -2.5189 10 6 1.4468 4.6671 -3.7602 11 6 0.7561 5.8510 -3.9467 12 35 0.0424 6.2720 -5.6464 13 6 0.5871 6.7265 -2.8892 14 6 1.1089 6.4184 -1.6469 15 6 3.4223 5.9041 0.3870 16 6 2.7893 5.7638 1.7814 17 1 2.7185 6.7048 2.3270 18 8 3.3551 4.7101 2.5635 19 6 1.4877 5.3680 1.0644 20 6 3.6849 0.5992 -0.0006 21 6 3.5859 -0.7389 -0.0004 22 6 4.7459 -1.7008 -0.0014 23 8 5.4772 -1.5664 1.2190 24 14 4.1070 -3.4441 -0.1536 25 8 2.2888 -1.0838 -0.0057 26 1 -0.3633 -0.0001 -1.0276 27 1 -0.3633 -0.8899 0.5138 28 1 -0.3634 0.8899 0.5137 29 1 3.7357 3.2857 0.0737 30 1 2.5154 3.4397 -2.3742 31 1 1.5793 3.9834 -4.5857 32 1 0.0482 7.6512 -3.0344 33 1 0.9774 7.1021 -0.8213 34 1 4.4437 5.5276 0.3313 35 1 3.3127 6.8991 -0.0441 36 1 4.1739 4.9530 3.0170 37 1 0.8492 6.2166 0.8185 38 1 0.9462 4.5590 1.5547 39 1 4.5927 1.1842 -0.0012 40 1 5.4011 -1.4791 -0.8438 41 1 4.9555 -1.7494 2.0124 42 1 3.3178 -3.5885 -1.4032 43 1 5.2413 -4.4026 -0.1551 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_13308374.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:44:22 Heat of formation + Delta-G solvation = -27.573611 kcal Electronic energy + Delta-G solvation = -30898.269892 eV Core-core repulsion = 26538.558591 eV Total energy + Delta-G solvation = -4359.711302 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.045 amu Computer time = 2.16 seconds Orbital eigenvalues (eV) -43.71943 -42.11332 -39.75039 -39.26752 -38.07784 -36.33250 -34.45072 -33.67343 -33.11855 -33.00431 -31.92968 -30.27821 -29.39540 -27.08573 -26.35934 -25.35968 -24.18070 -23.73097 -22.57422 -22.11223 -20.67997 -20.23574 -18.97742 -18.71860 -17.90217 -17.87829 -17.59902 -17.09741 -16.62975 -16.39924 -16.12254 -15.91095 -15.83958 -15.66480 -15.22900 -15.03955 -14.63940 -14.52201 -14.34721 -14.21598 -14.13945 -13.97219 -13.86248 -13.68866 -13.43995 -13.04529 -12.89900 -12.80707 -12.68273 -12.39068 -12.22793 -12.15391 -11.67227 -11.46312 -11.19348 -11.06713 -10.85922 -10.83372 -10.59903 -10.05045 -10.01439 -9.54694 -9.49143 -5.07928 0.05519 0.31595 0.34491 0.70477 0.87210 1.10070 1.41936 1.73718 1.88679 2.08085 2.40894 2.52767 2.95799 3.15800 3.32640 3.38656 3.45582 3.56978 3.64828 3.73965 3.79333 3.89365 3.91510 4.14767 4.19685 4.22725 4.31095 4.39530 4.44748 4.49047 4.57083 4.58631 4.63778 4.67448 4.74687 4.83012 4.85070 4.95162 5.04913 5.14156 5.19481 5.21917 5.23935 5.35728 5.67096 5.77932 5.94133 6.33581 6.54093 6.57317 7.30964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.095 3.905 3 C -0.251 4.251 4 C 0.598 3.402 5 O -0.528 6.528 6 N -0.695 5.695 7 C 0.198 3.802 8 C -0.056 4.056 9 C -0.098 4.098 10 C -0.087 4.087 11 C -0.092 4.092 12 Br -0.051 7.051 13 C -0.087 4.087 14 C -0.107 4.107 15 C -0.163 4.163 16 C 0.080 3.920 17 H 0.075 0.925 18 O -0.544 6.544 19 C -0.129 4.129 20 C -0.147 4.147 21 C -0.057 4.057 22 C -0.027 4.027 23 O -0.531 6.531 24 Si 0.703 3.297 25 O -0.168 6.168 26 H 0.091 0.909 27 H 0.082 0.918 28 H 0.111 0.889 29 H 0.404 0.596 30 H 0.125 0.875 31 H 0.131 0.869 32 H 0.135 0.865 33 H 0.133 0.867 34 H 0.083 0.917 35 H 0.107 0.893 36 H 0.381 0.619 37 H 0.106 0.894 38 H 0.094 0.906 39 H 0.156 0.844 40 H 0.133 0.867 41 H 0.384 0.616 42 H -0.253 1.253 43 H -0.247 1.247 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.503 0.674 3.631 4.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.042 3.958 3 C -0.255 4.255 4 C 0.387 3.613 5 O -0.406 6.406 6 N -0.346 5.346 7 C 0.111 3.889 8 C -0.058 4.058 9 C -0.117 4.117 10 C -0.107 4.107 11 C -0.171 4.171 12 Br 0.035 6.965 13 C -0.106 4.106 14 C -0.126 4.126 15 C -0.201 4.201 16 C 0.020 3.980 17 H 0.093 0.907 18 O -0.349 6.349 19 C -0.167 4.167 20 C -0.166 4.166 21 C -0.105 4.105 22 C -0.137 4.137 23 O -0.336 6.336 24 Si 0.602 3.398 25 O -0.065 6.065 26 H 0.109 0.891 27 H 0.101 0.899 28 H 0.130 0.870 29 H 0.239 0.761 30 H 0.143 0.857 31 H 0.149 0.851 32 H 0.153 0.847 33 H 0.151 0.849 34 H 0.102 0.898 35 H 0.125 0.875 36 H 0.228 0.772 37 H 0.124 0.876 38 H 0.112 0.888 39 H 0.174 0.826 40 H 0.150 0.850 41 H 0.232 0.768 42 H -0.177 1.177 43 H -0.171 1.171 Dipole moment (debyes) X Y Z Total from point charges 1.266 -0.196 1.859 2.258 hybrid contribution 1.480 0.854 0.203 1.721 sum 2.746 0.657 2.063 3.497 Atomic orbital electron populations 1.20696 0.83362 1.05485 1.04699 1.22900 0.94041 0.82845 0.96043 1.21106 0.93181 0.93760 1.17502 1.17075 0.85390 0.83450 0.75394 1.90782 1.16380 1.83813 1.49607 1.45221 1.09989 1.04068 1.75308 1.19822 0.96342 0.81741 0.91041 1.19927 0.96994 0.94404 0.94481 1.20929 0.99534 0.99395 0.91836 1.21105 0.96387 0.95234 0.97974 1.21831 1.04244 0.98568 0.92456 1.96767 1.84437 1.94127 1.21201 1.21089 0.98920 0.98997 0.91637 1.20913 0.97970 0.96744 0.96987 1.24054 0.98801 0.99587 0.97657 1.22715 0.94661 0.90511 0.90067 0.90707 1.86538 1.44041 1.38486 1.65831 1.23506 0.95819 1.02864 0.94500 1.22564 0.96457 0.93477 1.04140 1.22591 0.82930 0.95626 1.09380 1.24405 0.90615 1.07691 0.91038 1.86558 1.38960 1.93168 1.14953 0.94160 0.82650 0.74551 0.88400 1.83666 1.16341 1.35045 1.71472 0.89100 0.89946 0.87040 0.76053 0.85714 0.85098 0.84740 0.84896 0.89837 0.87473 0.77196 0.87618 0.88766 0.82590 0.85033 0.76769 1.17746 1.17071 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.01 9.89 36.00 0.36 0.35 16 2 C 0.10 0.16 7.37 -34.96 -0.26 -0.09 16 3 C -0.25 -0.49 6.31 -103.27 -0.65 -1.15 16 4 C 0.60 1.58 6.30 -12.54 -0.08 1.51 16 5 O -0.53 -2.72 13.26 5.27 0.07 -2.65 16 6 N -0.69 -0.18 3.75 -49.00 -0.18 -0.36 16 7 C 0.20 -0.03 0.94 -132.16 -0.12 -0.15 16 8 C -0.06 -0.06 4.89 -104.62 -0.51 -0.57 16 9 C -0.10 -0.18 8.98 -39.59 -0.36 -0.54 16 10 C -0.09 -0.18 9.79 -39.56 -0.39 -0.57 16 11 C -0.09 -0.20 6.22 -39.52 -0.25 -0.44 16 12 Br -0.05 -0.11 33.70 -68.01 -2.29 -2.40 16 13 C -0.09 -0.09 9.79 -39.56 -0.39 -0.48 16 14 C -0.11 -0.03 8.71 -39.59 -0.34 -0.38 16 15 C -0.16 0.41 7.12 -25.92 -0.18 0.22 16 16 C 0.08 -0.14 5.28 -25.92 -0.14 -0.28 16 17 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 18 O -0.54 0.50 13.09 -35.23 -0.46 0.03 16 19 C -0.13 -0.02 6.56 -25.92 -0.17 -0.19 16 20 C -0.15 -0.07 10.49 -37.45 -0.39 -0.46 16 21 C -0.06 -0.02 6.18 -35.74 -0.22 -0.24 16 22 C -0.03 0.03 2.97 36.00 0.11 0.13 16 23 O -0.53 0.53 12.88 -35.23 -0.45 0.07 16 24 Si 0.70 -0.85 32.09 -169.99 -5.46 -6.31 16 25 O -0.17 -0.20 8.90 7.67 0.07 -0.13 16 26 H 0.09 -0.03 8.14 -51.93 -0.42 -0.46 16 27 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.11 0.15 6.48 -51.93 -0.34 -0.18 16 29 H 0.40 -0.55 7.87 -40.82 -0.32 -0.88 16 30 H 0.12 0.19 6.73 -52.48 -0.35 -0.16 16 31 H 0.13 0.14 8.06 -52.48 -0.42 -0.28 16 32 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 33 H 0.13 -0.28 6.55 -52.48 -0.34 -0.62 16 34 H 0.08 -0.26 8.10 -51.93 -0.42 -0.68 16 35 H 0.11 -0.37 7.79 -51.93 -0.40 -0.77 16 36 H 0.38 -1.85 9.12 45.56 0.42 -1.43 16 37 H 0.11 -0.13 6.22 -51.93 -0.32 -0.46 16 38 H 0.09 0.31 6.95 -51.93 -0.36 -0.06 16 39 H 0.16 -0.21 7.75 -52.49 -0.41 -0.62 16 40 H 0.13 -0.20 7.96 -51.93 -0.41 -0.61 16 41 H 0.38 -1.74 8.70 45.56 0.40 -1.34 16 42 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 43 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 LS Contribution 380.43 15.07 5.73 5.73 Total: 0.00 -8.42 380.43 -11.14 -19.57 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -4.18 Total: -10.22 kcal Atomic # 6 Polarization: 0.65 SS G_CDS: -3.99 Total: -3.34 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.18 Total: -0.36 kcal Atomic # 8 Polarization: -1.90 SS G_CDS: -0.78 Total: -2.67 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.46 Total: -6.31 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.29 Total: -2.40 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -8.42 -11.14 -19.57 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13308374.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.004 kcal (2) G-P(sol) polarization free energy of solvation -8.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.145 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.569 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.574 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.16 seconds