Wall clock time and date at job start Sat Mar 6 2021 23:44:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86307 * 109.47092 * 2 1 4 4 C 1.50700 * 109.47015 * 119.99384 * 2 1 3 5 5 C 1.38055 * 119.80513 * 64.97603 * 4 2 1 6 6 C 1.38714 * 120.08688 * 180.02562 * 5 4 2 7 7 O 1.35651 * 120.15036 * 179.97438 * 6 5 4 8 8 C 1.40132 * 119.69604 * 0.02562 * 6 5 4 9 9 C 1.47545 * 120.18781 * 180.02562 * 8 6 5 10 10 O 1.21583 * 120.00081 * 359.97438 * 9 8 6 11 11 N 1.34777 * 119.99632 * 179.97438 * 9 8 6 12 12 C 1.46497 * 119.99618 * 175.03951 * 11 9 8 13 13 C 1.50703 * 112.85090 * 291.21287 * 12 11 9 14 14 C 1.38238 * 119.98844 * 346.60762 * 13 12 11 15 15 C 1.38227 * 120.00790 * 179.76782 * 14 13 12 16 16 C 1.38320 * 119.98826 * 0.50680 * 15 14 13 17 17 Br 1.89093 * 120.00883 * 179.76921 * 16 15 14 18 18 C 1.38321 * 119.98167 * 359.74764 * 16 15 14 19 19 C 1.38217 * 119.98961 * 359.97438 * 18 16 15 20 20 C 1.53780 * 113.61293 * 159.90745 * 12 11 9 21 21 C 1.53784 * 87.08297 * 270.88159 * 20 12 11 22 22 H 1.08991 * 113.61602 * 220.01896 * 21 20 12 23 23 O 1.42897 * 113.68808 * 89.12654 * 21 20 12 24 24 C 1.53780 * 87.07826 * 334.56764 * 21 20 12 25 25 C 1.39709 * 119.62016 * 0.02562 * 8 6 5 26 26 C 1.37779 * 119.90872 * 359.97438 * 25 8 6 27 27 H 0.96696 * 113.99752 * 60.00516 * 1 2 3 28 28 H 1.08993 * 109.47921 * 239.99331 * 2 1 3 29 29 H 1.48507 * 109.99553 * 298.67478 * 3 2 1 30 30 H 1.48493 * 109.99999 * 59.99289 * 3 2 1 31 31 H 1.08003 * 119.95903 * 0.02562 * 5 4 2 32 32 H 0.96704 * 113.99963 * 270.02572 * 7 6 5 33 33 H 0.97000 * 120.00164 * 355.04650 * 11 9 8 34 34 H 1.07996 * 119.99836 * 0.02562 * 14 13 12 35 35 H 1.07994 * 120.00071 * 180.27719 * 15 14 13 36 36 H 1.08002 * 120.01170 * 180.02562 * 18 16 15 37 37 H 1.08007 * 119.99557 * 180.02562 * 19 18 16 38 38 H 1.08995 * 113.61647 * 25.43313 * 20 12 11 39 39 H 1.09006 * 113.61369 * 156.33742 * 20 12 11 40 40 H 0.96703 * 114.00396 * 82.46712 * 23 21 20 41 41 H 1.09004 * 113.61713 * 270.87853 * 24 21 20 42 42 H 1.09001 * 113.61127 * 139.97947 * 24 21 20 43 43 H 1.08000 * 120.04556 * 179.97438 * 25 8 6 44 44 H 1.08004 * 119.85209 * 179.72688 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.6823 -2.0582 1.3945 6 6 2.1414 -2.7177 2.5252 7 8 1.8970 -4.0421 2.6878 8 6 2.8580 -2.0094 3.4990 9 6 3.3519 -2.7001 4.7056 10 8 3.1372 -3.8872 4.8573 11 7 4.0411 -2.0152 5.6396 12 6 4.4374 -2.6735 6.8869 13 6 3.2651 -2.9911 7.7791 14 6 2.0300 -2.4246 7.5249 15 6 0.9533 -2.7194 8.3401 16 6 1.1144 -3.5730 9.4165 17 35 -0.3566 -3.9715 10.5359 18 6 2.3517 -4.1354 9.6735 19 6 3.4264 -3.8447 8.8544 20 6 5.5946 -1.9691 7.6145 21 6 6.5465 -2.8479 6.7860 22 1 7.4020 -3.2180 7.3509 23 8 6.9172 -2.2697 5.5329 24 6 5.3936 -3.8601 6.6804 25 6 3.1020 -0.6453 3.3209 26 6 2.6385 -0.0062 2.1917 27 1 -0.3933 0.4416 -0.7651 28 1 1.7924 -0.5139 -0.8898 29 1 1.5879 2.4585 -1.2244 30 1 1.5614 2.4680 1.2083 31 1 1.1292 -2.6001 0.6415 32 1 1.0712 -4.2355 3.1523 33 1 4.2747 -1.0863 5.4860 34 1 1.9052 -1.7549 6.6869 35 1 -0.0126 -2.2803 8.1388 36 1 2.4779 -4.8024 10.5136 37 1 4.3924 -4.2841 9.0548 38 1 5.6716 -0.9062 7.3859 39 1 5.6287 -2.1766 8.6841 40 1 7.6419 -1.6322 5.5928 41 1 5.3726 -4.5846 7.4946 42 1 5.3082 -4.3237 5.6976 43 1 3.6531 -0.0926 4.0673 44 1 2.8238 1.0492 2.0571 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_13422076.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:44:30 Heat of formation + Delta-G solvation = -52.017991 kcal Electronic energy + Delta-G solvation = -32301.423978 eV Core-core repulsion = 27812.426548 eV Total energy + Delta-G solvation = -4488.997430 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.045 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -42.28384 -41.14331 -39.67557 -39.15693 -38.36588 -37.29729 -36.21501 -34.35820 -33.17865 -32.62285 -31.90802 -31.11542 -30.32171 -27.65859 -26.93525 -25.54352 -23.97886 -23.83955 -23.41420 -22.40641 -21.62532 -20.27780 -19.38950 -18.72943 -18.63625 -18.59441 -17.83650 -17.38806 -16.87033 -16.55526 -16.40348 -16.20889 -16.05791 -15.79259 -15.57200 -15.50663 -15.15353 -15.01916 -14.63645 -14.43271 -14.35835 -14.06323 -13.98118 -13.72387 -13.32210 -13.29964 -13.04373 -12.93630 -12.57150 -12.55615 -12.40497 -12.26363 -12.12484 -11.69482 -11.62765 -11.38819 -11.32611 -10.90751 -10.76273 -10.56611 -10.16133 -10.07541 -9.98959 -9.78222 -9.56367 -4.91050 -0.40116 -0.00942 0.14423 0.25666 0.59311 1.26477 1.61898 1.74245 1.95144 1.98588 2.48537 2.55512 3.12461 3.16242 3.26477 3.46483 3.52900 3.59388 3.66567 3.72366 3.74306 3.80660 3.87135 3.91562 4.10839 4.25187 4.26376 4.30241 4.37801 4.42062 4.60101 4.61788 4.69227 4.74740 4.84782 4.85587 4.91199 5.00683 5.01768 5.05381 5.11426 5.16026 5.16871 5.25489 5.32741 5.57963 5.65627 5.74209 6.50710 6.54078 6.67575 6.97579 7.23326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.098 4.098 3 Si 0.776 3.224 4 C -0.035 4.035 5 C -0.141 4.141 6 C 0.152 3.848 7 O -0.496 6.496 8 C -0.179 4.179 9 C 0.562 3.438 10 O -0.548 6.548 11 N -0.686 5.686 12 C 0.190 3.810 13 C -0.060 4.060 14 C -0.109 4.109 15 C -0.099 4.099 16 C -0.106 4.106 17 Br -0.058 7.058 18 C -0.093 4.093 19 C -0.108 4.108 20 C -0.145 4.145 21 C 0.087 3.913 22 H 0.093 0.907 23 O -0.564 6.564 24 C -0.141 4.141 25 C -0.053 4.053 26 C -0.134 4.134 27 H 0.397 0.603 28 H 0.095 0.905 29 H -0.288 1.288 30 H -0.286 1.286 31 H 0.134 0.866 32 H 0.404 0.596 33 H 0.414 0.586 34 H 0.126 0.874 35 H 0.134 0.866 36 H 0.147 0.853 37 H 0.157 0.843 38 H 0.100 0.900 39 H 0.122 0.878 40 H 0.398 0.602 41 H 0.116 0.884 42 H 0.053 0.947 43 H 0.167 0.833 44 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.454 7.264 0.144 9.718 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.206 4.206 3 Si 0.679 3.321 4 C -0.036 4.036 5 C -0.160 4.160 6 C 0.105 3.895 7 O -0.308 6.308 8 C -0.182 4.182 9 C 0.350 3.650 10 O -0.426 6.426 11 N -0.338 5.338 12 C 0.102 3.898 13 C -0.061 4.061 14 C -0.129 4.129 15 C -0.119 4.119 16 C -0.185 4.185 17 Br 0.028 6.972 18 C -0.112 4.112 19 C -0.127 4.127 20 C -0.183 4.183 21 C 0.027 3.973 22 H 0.111 0.889 23 O -0.373 6.373 24 C -0.179 4.179 25 C -0.071 4.071 26 C -0.151 4.151 27 H 0.248 0.752 28 H 0.113 0.887 29 H -0.215 1.215 30 H -0.213 1.213 31 H 0.152 0.848 32 H 0.264 0.736 33 H 0.253 0.747 34 H 0.144 0.856 35 H 0.152 0.848 36 H 0.165 0.835 37 H 0.175 0.825 38 H 0.119 0.881 39 H 0.140 0.860 40 H 0.249 0.751 41 H 0.134 0.866 42 H 0.072 0.928 43 H 0.185 0.815 44 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 5.672 6.329 0.722 8.529 hybrid contribution -1.381 0.236 -0.693 1.563 sum 4.291 6.565 0.028 7.843 Atomic orbital electron populations 1.86537 1.18187 1.80927 1.51140 1.25225 0.84437 1.12821 0.98082 0.93972 0.90041 0.71109 0.76940 1.19593 0.95708 0.92938 0.95350 1.21351 1.01456 0.94747 0.98453 1.18722 0.94890 0.83274 0.92577 1.84715 1.46874 1.19085 1.80147 1.20489 1.06101 0.95485 0.96157 1.18147 0.77907 0.86270 0.82671 1.90813 1.57837 1.15888 1.78075 1.45257 1.56464 1.15704 1.16403 1.20013 0.90400 0.95873 0.83480 1.20151 0.94762 0.95955 0.95279 1.21019 0.92270 1.00372 0.99190 1.21216 0.99994 0.96996 0.93683 1.21942 0.93820 1.04075 0.98691 1.96745 1.41429 1.94124 1.64932 1.21327 0.90828 0.98857 1.00218 1.21200 0.99912 0.97489 0.94057 1.24022 0.91971 1.01302 1.00985 1.22676 0.95992 0.93480 0.85114 0.88890 1.86502 1.58242 1.62699 1.29833 1.23588 0.94328 0.96658 1.03300 1.21447 0.96438 0.91522 0.97740 1.21211 0.99363 1.01024 0.93535 0.75210 0.88665 1.21548 1.21283 0.84782 0.73632 0.74700 0.85575 0.84841 0.83529 0.82529 0.88133 0.86006 0.75138 0.86615 0.92782 0.81530 0.82372 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.46 12.81 -148.98 -1.91 -2.37 16 2 C -0.10 0.21 2.79 71.24 0.20 0.41 16 3 Si 0.78 -3.90 29.84 68.60 2.05 -1.85 16 4 C -0.04 -0.04 5.39 -19.83 -0.11 -0.15 16 5 C -0.14 -0.67 9.60 22.34 0.21 -0.46 16 6 C 0.15 1.11 6.72 22.84 0.15 1.27 16 7 O -0.50 -4.98 11.58 -68.75 -0.80 -5.77 16 8 C -0.18 -0.79 5.89 -20.01 -0.12 -0.91 16 9 C 0.56 3.70 6.26 86.70 0.54 4.25 16 10 O -0.55 -7.95 13.58 16.94 0.23 -7.72 16 11 N -0.69 0.38 3.70 -427.05 -1.58 -1.20 16 12 C 0.19 -0.20 0.94 3.38 0.00 -0.20 16 13 C -0.06 -0.10 4.89 -19.86 -0.10 -0.20 16 14 C -0.11 -0.41 8.98 22.27 0.20 -0.21 16 15 C -0.10 -0.47 9.79 22.29 0.22 -0.25 16 16 C -0.11 -0.51 6.22 22.31 0.14 -0.38 16 17 Br -0.06 -0.29 33.70 -20.37 -0.69 -0.98 16 18 C -0.09 -0.20 9.79 22.28 0.22 0.02 16 19 C -0.11 -0.01 8.71 22.27 0.19 0.18 16 20 C -0.15 1.14 7.13 31.12 0.22 1.36 16 21 C 0.09 -0.45 5.27 31.12 0.16 -0.29 16 22 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 23 O -0.56 1.98 13.09 -148.98 -1.95 0.03 16 24 C -0.14 -0.15 6.55 31.12 0.20 0.06 16 25 C -0.05 0.13 9.53 22.52 0.21 0.35 16 26 C -0.13 0.33 8.64 22.24 0.19 0.52 16 27 H 0.40 -2.83 8.74 -74.06 -0.65 -3.47 16 28 H 0.10 -0.50 7.96 -2.39 -0.02 -0.52 16 29 H -0.29 0.06 7.11 99.48 0.71 0.77 16 30 H -0.29 -0.15 7.04 99.48 0.70 0.55 16 31 H 0.13 0.59 8.06 -2.91 -0.02 0.57 16 32 H 0.40 1.56 9.06 -74.05 -0.67 0.89 16 33 H 0.41 -2.64 6.73 -92.71 -0.62 -3.27 16 34 H 0.13 0.32 6.73 -2.91 -0.02 0.30 16 35 H 0.13 0.41 8.06 -2.91 -0.02 0.39 16 36 H 0.15 -0.15 8.06 -2.91 -0.02 -0.17 16 37 H 0.16 -0.85 6.54 -2.91 -0.02 -0.87 16 38 H 0.10 -1.08 8.10 -2.39 -0.02 -1.10 16 39 H 0.12 -1.25 7.79 -2.38 -0.02 -1.27 16 40 H 0.40 -4.94 9.12 -74.05 -0.68 -5.61 16 41 H 0.12 -0.24 6.22 -2.38 -0.01 -0.26 16 42 H 0.05 0.54 6.95 -2.39 -0.02 0.52 16 43 H 0.17 -1.68 6.42 -2.91 -0.02 -1.70 16 44 H 0.16 -1.20 4.83 -2.91 -0.01 -1.21 16 Total: 0.00 -27.44 383.03 -3.35 -30.79 By element: Atomic # 1 Polarization: -14.83 SS G_CDS: -1.46 Total: -16.29 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: 2.76 Total: 5.37 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -1.58 Total: -1.20 kcal Atomic # 8 Polarization: -11.42 SS G_CDS: -4.42 Total: -15.84 kcal Atomic # 14 Polarization: -3.90 SS G_CDS: 2.05 Total: -1.85 kcal Atomic # 35 Polarization: -0.29 SS G_CDS: -0.69 Total: -0.98 kcal Total: -27.44 -3.35 -30.79 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13422076.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.231 kcal (2) G-P(sol) polarization free energy of solvation -27.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.787 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds