Wall clock time and date at job start Sat Mar 6 2021 23:44:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 C 1.46908 * 111.00142 * 2 1 4 4 C 1.39044 * 111.00115 * 123.95378 * 2 1 3 5 5 C 1.39203 * 119.93395 * 120.00252 * 4 2 1 6 6 C 1.50709 * 119.96139 * 0.04007 * 5 4 2 7 7 O 1.42900 * 109.47032 * 284.98072 * 6 5 4 8 8 Si 1.86294 * 109.46640 * 164.98217 * 6 5 4 9 9 C 1.37625 * 120.07309 * 180.02562 * 5 4 2 10 10 C 1.39776 * 119.92919 * 359.97438 * 9 5 4 11 11 C 1.47519 * 120.06977 * 179.97438 * 10 9 5 12 12 O 1.21599 * 120.00051 * 359.97438 * 11 10 9 13 13 N 1.34783 * 120.00097 * 179.97438 * 11 10 9 14 14 C 1.46493 * 119.99654 * 185.25776 * 13 11 10 15 15 C 1.50697 * 112.91270 * 54.34568 * 14 13 11 16 16 C 1.38239 * 119.99151 * 215.71944 * 15 14 13 17 17 C 1.38219 * 120.00747 * 179.71955 * 16 15 14 18 18 C 1.38322 * 119.99436 * 0.55126 * 17 16 15 19 19 Br 1.89101 * 120.01468 * 179.70073 * 18 17 16 20 20 C 1.38328 * 119.97325 * 359.72401 * 18 17 16 21 21 C 1.38214 * 119.99459 * 359.97438 * 20 18 17 22 22 C 1.53780 * 113.61585 * 283.09065 * 14 13 11 23 23 C 1.53783 * 87.08374 * 270.88664 * 22 14 13 24 24 H 1.09000 * 113.62115 * 220.01928 * 23 22 14 25 25 O 1.42903 * 113.68970 * 89.12249 * 23 22 14 26 26 C 1.53777 * 113.61147 * 185.59592 * 14 13 11 27 27 C 1.39817 * 119.86198 * 0.25449 * 10 9 5 28 28 C 1.37591 * 119.93186 * 359.48948 * 27 10 9 29 29 H 1.09008 * 109.46948 * 296.04912 * 1 2 3 30 30 H 1.09004 * 109.47070 * 56.04403 * 1 2 3 31 31 H 1.08998 * 109.47376 * 176.04792 * 1 2 3 32 32 H 1.09002 * 109.47037 * 183.95699 * 3 2 1 33 33 H 1.09000 * 109.46773 * 303.95556 * 3 2 1 34 34 H 1.08996 * 109.47209 * 63.95450 * 3 2 1 35 35 H 1.08992 * 109.47024 * 44.98194 * 6 5 4 36 36 H 0.96703 * 113.99800 * 60.00428 * 7 6 5 37 37 H 1.48504 * 109.99530 * 178.68329 * 8 6 5 38 38 H 1.48501 * 110.00229 * 299.99794 * 8 6 5 39 39 H 1.07996 * 120.03684 * 179.97438 * 9 5 4 40 40 H 0.97001 * 119.99670 * 5.25734 * 13 11 10 41 41 H 1.08003 * 119.99306 * 359.97438 * 16 15 14 42 42 H 1.08005 * 120.00221 * 180.25267 * 17 16 15 43 43 H 1.08004 * 120.00182 * 179.97438 * 20 18 17 44 44 H 1.07996 * 119.99770 * 179.97438 * 21 20 18 45 45 H 1.08999 * 113.61662 * 156.33740 * 22 14 13 46 46 H 1.08998 * 113.61591 * 25.43188 * 22 14 13 47 47 H 0.96700 * 113.99909 * 80.94315 * 25 23 22 48 48 H 1.09008 * 113.61553 * 334.56343 * 26 14 13 49 49 H 1.09000 * 113.61608 * 203.66606 * 26 14 13 50 50 H 1.08002 * 120.03540 * 179.74809 * 27 10 9 51 51 H 1.08000 * 119.96586 * 180.25217 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.9673 -0.7250 1.0767 5 6 2.7794 -1.8330 0.8518 6 6 3.1178 -2.2444 -0.5580 7 8 1.9831 -2.8745 -1.1557 8 14 4.5480 -3.4379 -0.5300 9 6 3.2737 -2.5530 1.9155 10 6 2.9600 -2.1703 3.2227 11 6 3.4878 -2.9401 4.3651 12 8 4.1961 -3.9091 4.1700 13 7 3.1848 -2.5696 5.6250 14 6 3.8001 -3.2618 6.7600 15 6 5.3054 -3.2785 6.6911 16 6 6.0056 -4.3821 7.1412 17 6 7.3860 -4.4001 7.0728 18 6 8.0674 -3.3090 6.5644 19 35 9.9563 -3.3297 6.4783 20 6 7.3665 -2.2026 6.1193 21 6 5.9859 -2.1880 6.1823 22 6 3.1815 -4.6395 7.0503 23 6 2.1841 -3.9112 7.9666 24 1 1.9682 -4.4474 8.8908 25 8 1.0039 -3.4681 7.2935 26 6 3.2510 -2.8151 8.1252 27 6 2.1402 -1.0598 3.4452 28 6 1.6534 -0.3409 2.3778 29 1 -0.3633 0.4513 0.9233 30 1 -0.3633 0.5740 -0.8524 31 1 -0.3634 -1.0252 -0.0708 32 1 3.0828 1.3432 -0.0709 33 1 1.5898 1.9163 -0.8524 34 1 1.7044 1.8724 0.9233 35 1 3.3914 -1.3630 -1.1378 36 1 1.1995 -2.3099 -1.2036 37 1 4.8710 -3.8758 -1.9118 38 1 5.7345 -2.7946 0.0893 39 1 3.9034 -3.4128 1.7403 40 1 2.5594 -1.8445 5.7802 41 1 5.4737 -5.2321 7.5427 42 1 7.9327 -5.2641 7.4208 43 1 7.8981 -1.3503 5.7226 44 1 5.4387 -1.3240 5.8353 45 1 3.8507 -5.3151 7.5830 46 1 2.7169 -5.1017 6.1794 47 1 0.3387 -4.1591 7.1700 48 1 2.8425 -1.8044 8.1221 49 1 3.9391 -2.9919 8.9518 50 1 1.8927 -0.7640 4.4540 51 1 1.0234 0.5194 2.5492 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_13422196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:44:39 Heat of formation + Delta-G solvation = 3.752017 kcal Electronic energy + Delta-G solvation = -36741.257525 eV Core-core repulsion = 32041.321888 eV Total energy + Delta-G solvation = -4699.935637 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 447.088 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -42.25976 -41.40288 -39.87269 -39.35385 -37.71298 -37.28992 -36.23144 -34.27227 -33.15638 -32.68928 -32.04168 -31.23656 -30.28599 -28.59976 -27.03637 -26.94316 -26.56192 -25.17367 -23.80113 -23.39245 -22.95615 -22.37766 -21.20172 -20.31846 -19.19089 -18.55834 -18.14658 -17.79902 -17.72259 -17.33127 -16.79086 -16.40945 -16.30320 -16.06879 -16.00547 -15.81647 -15.49495 -15.35218 -15.22735 -15.16888 -15.00400 -14.58650 -14.50255 -14.25338 -14.19271 -13.92816 -13.67967 -13.50544 -13.44092 -13.16757 -13.08419 -12.97010 -12.73731 -12.64337 -12.52003 -12.25140 -12.23773 -12.21548 -11.67075 -11.50315 -11.42565 -11.32252 -11.26845 -11.02140 -10.74272 -10.15774 -10.10192 -10.05144 -9.80982 -9.63617 -9.54408 -4.96296 -0.40200 0.01322 0.13946 0.28444 0.60533 1.29820 1.51220 1.69098 1.82407 1.96675 2.53477 2.63115 2.71542 3.12094 3.44285 3.50095 3.53444 3.57516 3.64179 3.69673 3.85464 3.87699 3.88742 3.90513 4.01534 4.10946 4.17801 4.25541 4.33791 4.36544 4.40168 4.42595 4.44148 4.56691 4.60573 4.64014 4.71239 4.74174 4.80870 4.86410 4.91327 4.91661 4.97018 5.00625 5.02018 5.04304 5.11754 5.17192 5.18967 5.20293 5.34928 5.50867 5.63287 5.74964 5.77067 6.18574 6.47844 6.62538 6.87444 7.17591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 N -0.528 5.528 3 C 0.026 3.974 4 C 0.126 3.874 5 C -0.112 4.112 6 C -0.055 4.055 7 O -0.544 6.544 8 Si 0.769 3.231 9 C -0.059 4.059 10 C -0.143 4.143 11 C 0.561 3.439 12 O -0.556 6.556 13 N -0.684 5.684 14 C 0.188 3.812 15 C -0.053 4.053 16 C -0.107 4.107 17 C -0.094 4.094 18 C -0.105 4.105 19 Br -0.059 7.059 20 C -0.100 4.100 21 C -0.110 4.110 22 C -0.175 4.175 23 C 0.088 3.912 24 H 0.093 0.907 25 O -0.563 6.563 26 C -0.118 4.118 27 C -0.059 4.059 28 C -0.151 4.151 29 H 0.043 0.957 30 H 0.088 0.912 31 H 0.073 0.927 32 H 0.061 0.939 33 H 0.087 0.913 34 H 0.044 0.956 35 H 0.080 0.920 36 H 0.374 0.626 37 H -0.285 1.285 38 H -0.277 1.277 39 H 0.135 0.865 40 H 0.415 0.585 41 H 0.155 0.845 42 H 0.144 0.856 43 H 0.134 0.866 44 H 0.131 0.869 45 H 0.114 0.886 46 H 0.064 0.936 47 H 0.397 0.603 48 H 0.092 0.908 49 H 0.125 0.875 50 H 0.156 0.844 51 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.565 3.599 5.513 10.028 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 N -0.249 5.249 3 C -0.120 4.120 4 C 0.031 3.969 5 C -0.114 4.114 6 C -0.165 4.165 7 O -0.350 6.350 8 Si 0.673 3.327 9 C -0.078 4.078 10 C -0.147 4.147 11 C 0.349 3.651 12 O -0.435 6.435 13 N -0.336 5.336 14 C 0.101 3.899 15 C -0.055 4.055 16 C -0.126 4.126 17 C -0.114 4.114 18 C -0.185 4.185 19 Br 0.026 6.974 20 C -0.120 4.120 21 C -0.129 4.129 22 C -0.214 4.214 23 C 0.029 3.971 24 H 0.111 0.889 25 O -0.371 6.371 26 C -0.155 4.155 27 C -0.078 4.078 28 C -0.171 4.171 29 H 0.062 0.938 30 H 0.106 0.894 31 H 0.092 0.908 32 H 0.080 0.920 33 H 0.106 0.894 34 H 0.063 0.937 35 H 0.097 0.903 36 H 0.224 0.776 37 H -0.212 1.212 38 H -0.203 1.203 39 H 0.152 0.848 40 H 0.254 0.746 41 H 0.172 0.828 42 H 0.162 0.838 43 H 0.152 0.848 44 H 0.149 0.851 45 H 0.132 0.868 46 H 0.083 0.917 47 H 0.247 0.753 48 H 0.110 0.890 49 H 0.143 0.857 50 H 0.173 0.827 51 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -4.675 2.635 4.587 7.059 hybrid contribution -1.434 1.667 -0.044 2.199 sum -6.109 4.302 4.543 8.744 Atomic orbital electron populations 1.22593 0.83926 1.03405 1.02393 1.59454 1.09981 1.15183 1.40315 1.22515 1.00650 0.86505 1.02362 1.18940 0.94912 0.93128 0.89921 1.20173 0.99467 0.95907 0.95807 1.25096 0.97484 1.03750 0.90176 1.86689 1.22669 1.43371 1.82316 0.92287 0.73135 0.86382 0.80920 1.21038 0.97323 0.98045 0.91377 1.19902 1.02974 0.98860 0.92919 1.18266 0.79868 0.83609 0.83363 1.90814 1.38890 1.28129 1.85641 1.45373 1.46656 1.38144 1.03424 1.20038 0.87190 0.95325 0.87320 1.19973 0.95036 0.93825 0.96617 1.21303 0.93130 0.98322 0.99804 1.21316 0.94861 0.97250 0.97980 1.21939 0.90299 0.98900 1.07345 1.96737 1.03707 1.99073 1.97841 1.21214 0.94659 0.97372 0.98740 1.21023 0.93319 0.99065 0.99448 1.24237 0.99804 0.96182 1.01131 1.22668 0.84785 0.95131 0.94560 0.88891 1.86350 1.28788 1.41587 1.80355 1.23453 0.96767 1.00764 0.94539 1.21420 0.93536 0.92281 1.00548 1.21803 1.01720 1.01445 0.92147 0.93847 0.89362 0.90817 0.91984 0.89384 0.93746 0.90297 0.77636 1.21167 1.20271 0.84769 0.74627 0.82802 0.83799 0.84785 0.85098 0.86802 0.91695 0.75277 0.88963 0.85678 0.82674 0.83233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.13 9.20 127.69 1.18 1.05 16 2 N -0.53 1.15 3.67 -745.07 -2.73 -1.58 16 3 C 0.03 -0.11 9.38 127.69 1.20 1.09 16 4 C 0.13 0.02 4.66 38.47 0.18 0.20 16 5 C -0.11 -0.42 5.28 -19.77 -0.10 -0.53 16 6 C -0.06 -0.27 2.29 71.24 0.16 -0.11 16 7 O -0.54 -3.03 12.65 -148.98 -1.89 -4.91 16 8 Si 0.77 5.07 30.17 68.60 2.07 7.14 16 9 C -0.06 -0.31 8.19 22.50 0.18 -0.12 16 10 C -0.14 -0.37 5.88 -20.08 -0.12 -0.49 16 11 C 0.56 2.53 6.98 86.69 0.61 3.14 16 12 O -0.56 -6.61 15.34 -4.03 -0.06 -6.67 16 13 N -0.68 1.09 4.09 -427.07 -1.75 -0.66 16 14 C 0.19 -0.39 0.89 3.38 0.00 -0.38 16 15 C -0.05 -0.09 3.95 -19.86 -0.08 -0.17 16 16 C -0.11 -0.14 9.27 22.27 0.21 0.06 16 17 C -0.09 -0.32 9.79 22.29 0.22 -0.10 16 18 C -0.11 -0.60 6.22 22.31 0.14 -0.46 16 19 Br -0.06 -0.34 33.70 -20.37 -0.69 -1.03 16 20 C -0.10 -0.51 9.79 22.29 0.22 -0.29 16 21 C -0.11 -0.38 8.93 22.27 0.20 -0.18 16 22 C -0.18 0.58 6.78 31.12 0.21 0.79 16 23 C 0.09 -0.61 5.27 31.12 0.16 -0.45 16 24 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 25 O -0.56 3.31 13.07 -148.98 -1.95 1.36 16 26 C -0.12 0.79 7.16 31.12 0.22 1.01 16 27 C -0.06 0.18 9.52 22.50 0.21 0.40 16 28 C -0.15 0.47 8.53 22.36 0.19 0.66 16 29 H 0.04 -0.30 7.10 -2.38 -0.02 -0.32 16 30 H 0.09 -0.65 8.12 -2.38 -0.02 -0.67 16 31 H 0.07 -0.39 7.84 -2.39 -0.02 -0.41 16 32 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.09 -0.53 8.12 -2.39 -0.02 -0.55 16 34 H 0.04 -0.26 7.32 -2.39 -0.02 -0.28 16 35 H 0.08 0.38 7.77 -2.39 -0.02 0.36 16 36 H 0.37 0.39 8.06 -74.06 -0.60 -0.21 16 37 H -0.28 -3.35 7.11 99.48 0.71 -2.65 16 38 H -0.28 -2.92 7.11 99.48 0.71 -2.21 16 39 H 0.14 0.88 4.70 -2.91 -0.01 0.87 16 40 H 0.41 -2.40 6.64 -92.71 -0.62 -3.02 16 41 H 0.15 -0.54 5.67 -2.91 -0.02 -0.55 16 42 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 43 H 0.13 0.44 8.06 -2.91 -0.02 0.41 16 44 H 0.13 0.15 7.74 -2.91 -0.02 0.12 16 45 H 0.11 -0.66 5.66 -2.39 -0.01 -0.68 16 46 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 47 H 0.40 -4.56 9.12 -74.06 -0.68 -5.23 16 48 H 0.09 -0.68 8.10 -2.38 -0.02 -0.70 16 49 H 0.13 -1.11 8.09 -2.39 -0.02 -1.13 16 50 H 0.16 -1.40 6.40 -2.91 -0.02 -1.42 16 51 H 0.15 -1.08 6.99 -2.91 -0.02 -1.10 16 Total: 0.00 -18.93 428.86 -2.63 -21.56 By element: Atomic # 1 Polarization: -19.50 SS G_CDS: -0.83 Total: -20.33 kcal Atomic # 6 Polarization: -0.08 SS G_CDS: 5.19 Total: 5.11 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -4.48 Total: -2.24 kcal Atomic # 8 Polarization: -6.32 SS G_CDS: -3.89 Total: -10.22 kcal Atomic # 14 Polarization: 5.07 SS G_CDS: 2.07 Total: 7.14 kcal Atomic # 35 Polarization: -0.34 SS G_CDS: -0.69 Total: -1.03 kcal Total: -18.93 -2.63 -21.56 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13422196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.313 kcal (2) G-P(sol) polarization free energy of solvation -18.929 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.632 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.561 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.752 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds