Wall clock time and date at job start Sat Mar 6 2021 23:44:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86300 * 109.46844 * 2 1 4 4 C 1.50694 * 109.47282 * 119.99909 * 2 1 3 5 5 C 1.34176 * 125.43932 * 65.00204 * 4 2 1 6 6 C 1.47016 * 105.95703 * 179.97438 * 5 4 2 7 7 C 1.47377 * 127.19534 * 179.97438 * 6 5 4 8 8 O 1.21618 * 119.99658 * 0.02562 * 7 6 5 9 9 N 1.34769 * 120.00373 * 180.02562 * 7 6 5 10 10 C 1.46503 * 120.00259 * 174.76520 * 9 7 6 11 11 C 1.50701 * 112.84864 * 292.20563 * 10 9 7 12 12 C 1.38247 * 119.98566 * 165.10178 * 11 10 9 13 13 C 1.38224 * 120.00616 * 179.72923 * 12 11 10 14 14 C 1.38328 * 119.98875 * 0.54442 * 13 12 11 15 15 Br 1.89098 * 120.01182 * 179.70638 * 14 13 12 16 16 C 1.38328 * 119.97906 * 359.73069 * 14 13 12 17 17 C 1.38224 * 119.99227 * 359.97438 * 16 14 13 18 18 C 1.53785 * 113.61541 * 160.90046 * 10 9 7 19 19 C 1.53785 * 87.08075 * 270.88321 * 18 10 9 20 20 H 1.08995 * 113.69212 * 220.00383 * 19 18 10 21 21 O 1.42900 * 113.61036 * 89.11392 * 19 18 10 22 22 C 1.53778 * 113.61410 * 63.40211 * 10 9 7 23 23 C 1.36415 * 105.61805 * 0.02562 * 6 5 4 24 24 O 1.33656 * 108.39219 * 359.97438 * 23 6 5 25 25 H 0.96695 * 114.00057 * 299.99726 * 1 2 3 26 26 H 1.08996 * 109.46961 * 240.00760 * 2 1 3 27 27 H 1.48510 * 109.99943 * 300.00274 * 3 2 1 28 28 H 1.48505 * 110.00100 * 61.31751 * 3 2 1 29 29 H 1.08007 * 127.02298 * 359.73935 * 5 4 2 30 30 H 0.96998 * 120.00268 * 354.76793 * 9 7 6 31 31 H 1.07997 * 119.99807 * 359.97438 * 12 11 10 32 32 H 1.07995 * 120.00709 * 180.29949 * 13 12 11 33 33 H 1.08004 * 120.00707 * 179.97438 * 16 14 13 34 34 H 1.07996 * 119.99371 * 179.97438 * 17 16 14 35 35 H 1.08998 * 113.61139 * 25.43095 * 18 10 9 36 36 H 1.08999 * 113.61265 * 156.33819 * 18 10 9 37 37 H 0.96700 * 113.99655 * 82.50898 * 21 19 18 38 38 H 1.09003 * 113.61563 * 203.66319 * 22 10 9 39 39 H 1.08998 * 113.61643 * 334.48909 * 22 10 9 40 40 H 1.07997 * 125.80579 * 180.02562 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2304 5 6 1.7553 -2.0121 1.5036 6 6 2.4132 -2.2462 2.7974 7 6 2.5009 -3.5191 3.5349 8 8 1.9933 -4.5243 3.0754 9 7 3.1435 -3.5694 4.7184 10 6 3.1329 -4.8047 5.5060 11 6 1.7678 -5.1411 6.0485 12 6 1.5131 -6.4071 6.5421 13 6 0.2628 -6.7144 7.0450 14 6 -0.7369 -5.7583 7.0439 15 35 -2.4501 -6.1806 7.7241 16 6 -0.4832 -4.4935 6.5447 17 6 0.7692 -4.1852 6.0477 18 6 4.2507 -4.8730 6.5599 19 6 5.1300 -5.5114 5.4716 20 1 5.7562 -6.3256 5.8363 21 8 5.8561 -4.5597 4.6912 22 6 3.8266 -5.9863 4.8078 23 6 2.9246 -1.0387 3.1731 24 8 2.6267 -0.1420 2.2278 25 1 -0.3933 0.4416 0.7650 26 1 1.7924 -0.5137 -0.8900 27 1 1.5614 2.4679 -1.2085 28 1 1.5878 2.4586 1.2242 29 1 1.2331 -2.7388 0.8987 30 1 3.6131 -2.7876 5.0490 31 1 2.2923 -7.1549 6.5384 32 1 0.0653 -7.7019 7.4350 33 1 -1.2636 -3.7468 6.5433 34 1 0.9671 -3.1978 5.6575 35 1 4.6025 -3.8947 6.8872 36 1 4.0278 -5.5434 7.3899 37 1 6.6768 -4.2573 5.1035 38 1 3.4878 -6.9610 5.1589 39 1 3.8349 -5.9074 3.7207 40 1 3.4770 -0.8410 4.0798 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_13456056.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:44:56 Heat of formation + Delta-G solvation = -21.009485 kcal Electronic energy + Delta-G solvation = -28480.265266 eV Core-core repulsion = 24276.376226 eV Total energy + Delta-G solvation = -4203.889041 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.029 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.72328 -42.15614 -39.75932 -39.28007 -38.15276 -36.35897 -34.45260 -33.59927 -33.12664 -32.05154 -31.62918 -30.26059 -27.14249 -26.85723 -26.01336 -24.53362 -23.77726 -22.46458 -22.24662 -21.10499 -20.28847 -19.42946 -18.75665 -18.08242 -17.73992 -17.54580 -17.27979 -17.00907 -16.44398 -16.21884 -16.04582 -15.88698 -15.69566 -15.30735 -15.13091 -14.68570 -14.49378 -14.34039 -14.16177 -13.93097 -13.82975 -13.64738 -13.39520 -13.06138 -12.96158 -12.71764 -12.41859 -12.24575 -12.08937 -11.70323 -11.49831 -11.19945 -11.11394 -10.95512 -10.83015 -10.74401 -10.12183 -10.02761 -9.81912 -9.51353 -5.01425 0.03904 0.24167 0.30420 0.69762 0.90366 1.11088 1.46625 1.70361 1.90064 1.94677 2.37713 2.50920 2.91631 3.12777 3.28543 3.34985 3.43649 3.52602 3.57299 3.66728 3.77158 3.88291 3.94145 4.15126 4.27277 4.31297 4.36920 4.44061 4.46414 4.54083 4.58997 4.61608 4.73374 4.78891 4.80519 4.92986 5.03175 5.17095 5.20339 5.22497 5.31064 5.61564 5.76316 5.82593 6.21960 6.44681 6.53045 7.25016 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.704 3.296 4 C -0.057 4.057 5 C -0.122 4.122 6 C -0.235 4.235 7 C 0.592 3.408 8 O -0.519 6.519 9 N -0.699 5.699 10 C 0.198 3.802 11 C -0.058 4.058 12 C -0.107 4.107 13 C -0.086 4.086 14 C -0.091 4.091 15 Br -0.050 7.050 16 C -0.087 4.087 17 C -0.098 4.098 18 C -0.162 4.162 19 C 0.080 3.920 20 H 0.076 0.924 21 O -0.545 6.545 22 C -0.131 4.131 23 C 0.031 3.969 24 O -0.166 6.166 25 H 0.380 0.620 26 H 0.138 0.862 27 H -0.249 1.249 28 H -0.256 1.256 29 H 0.161 0.839 30 H 0.401 0.599 31 H 0.134 0.866 32 H 0.135 0.865 33 H 0.132 0.868 34 H 0.125 0.875 35 H 0.084 0.916 36 H 0.108 0.892 37 H 0.381 0.619 38 H 0.106 0.894 39 H 0.093 0.907 40 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.821 2.713 3.598 8.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.145 4.145 3 Si 0.603 3.397 4 C -0.105 4.105 5 C -0.141 4.141 6 C -0.239 4.239 7 C 0.380 3.620 8 O -0.394 6.394 9 N -0.351 5.351 10 C 0.111 3.889 11 C -0.059 4.059 12 C -0.126 4.126 13 C -0.106 4.106 14 C -0.171 4.171 15 Br 0.035 6.965 16 C -0.107 4.107 17 C -0.117 4.117 18 C -0.200 4.200 19 C 0.021 3.979 20 H 0.094 0.906 21 O -0.350 6.350 22 C -0.169 4.169 23 C -0.039 4.039 24 O -0.062 6.062 25 H 0.229 0.771 26 H 0.155 0.845 27 H -0.173 1.173 28 H -0.180 1.180 29 H 0.179 0.821 30 H 0.236 0.764 31 H 0.151 0.849 32 H 0.153 0.847 33 H 0.149 0.851 34 H 0.142 0.858 35 H 0.102 0.898 36 H 0.126 0.874 37 H 0.228 0.772 38 H 0.125 0.875 39 H 0.112 0.888 40 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges 5.219 2.576 2.535 6.348 hybrid contribution -0.092 0.113 1.107 1.117 sum 5.127 2.689 3.642 6.840 Atomic orbital electron populations 1.86684 1.16655 1.80128 1.49192 1.24397 0.84018 1.12289 0.93772 0.94448 0.91282 0.73012 0.80931 1.22656 1.01802 0.93375 0.92672 1.22533 1.01013 0.95303 0.95283 1.21514 1.09022 0.94238 0.99165 1.17184 0.77775 0.87120 0.79936 1.90832 1.46251 1.35269 1.67072 1.45282 1.55243 1.14128 1.20464 1.19827 0.90735 0.86217 0.92118 1.19909 0.94915 0.93944 0.97176 1.20925 0.96844 0.95874 0.98921 1.21098 0.92097 0.98879 0.98556 1.21839 0.92591 0.97107 1.05519 1.96770 1.20003 1.94339 1.85350 1.21109 0.97466 0.95046 0.97072 1.20904 0.92238 0.99643 0.98924 1.24050 0.95397 1.03296 0.97208 1.22718 0.92652 0.91196 0.91363 0.90630 1.86533 1.39333 1.61724 1.47381 1.23524 0.92629 0.97444 1.03264 1.24451 0.99455 0.86769 0.93253 1.83690 1.57228 1.38899 1.26397 0.77148 0.84477 1.17344 1.18001 0.82105 0.76365 0.84852 0.84707 0.85050 0.85757 0.89786 0.87412 0.77177 0.87537 0.88812 0.77094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.39 12.88 -35.23 -0.45 -0.84 16 2 C -0.04 0.02 2.97 36.00 0.11 0.13 16 3 Si 0.70 -1.01 32.09 -169.99 -5.46 -6.46 16 4 C -0.06 -0.02 6.18 -35.74 -0.22 -0.24 16 5 C -0.12 -0.25 10.90 -37.46 -0.41 -0.66 16 6 C -0.23 -0.28 6.31 -103.28 -0.65 -0.94 16 7 C 0.59 1.47 6.32 -12.54 -0.08 1.39 16 8 O -0.52 -3.39 15.44 5.26 0.08 -3.31 16 9 N -0.70 0.54 3.75 -49.00 -0.18 0.35 16 10 C 0.20 -0.13 0.94 -132.16 -0.12 -0.25 16 11 C -0.06 -0.05 4.83 -104.62 -0.51 -0.55 16 12 C -0.11 -0.03 8.80 -39.58 -0.35 -0.38 16 13 C -0.09 -0.09 9.79 -39.55 -0.39 -0.48 16 14 C -0.09 -0.20 6.22 -39.52 -0.25 -0.44 16 15 Br -0.05 -0.11 33.70 -68.01 -2.29 -2.40 16 16 C -0.09 -0.17 9.79 -39.55 -0.39 -0.56 16 17 C -0.10 -0.15 8.96 -39.59 -0.35 -0.51 16 18 C -0.16 0.53 7.13 -25.91 -0.18 0.34 16 19 C 0.08 -0.19 5.28 -25.92 -0.14 -0.33 16 20 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 21 O -0.54 0.96 13.09 -35.23 -0.46 0.50 16 22 C -0.13 0.00 6.56 -25.92 -0.17 -0.17 16 23 C 0.03 -0.05 11.61 30.08 0.35 0.30 16 24 O -0.17 0.07 8.90 7.65 0.07 0.14 16 25 H 0.38 -0.81 8.70 45.56 0.40 -0.41 16 26 H 0.14 -0.26 7.96 -51.93 -0.41 -0.67 16 27 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 28 H -0.26 -0.26 7.11 56.52 0.40 0.15 16 29 H 0.16 0.44 8.06 -52.48 -0.42 0.01 16 30 H 0.40 -1.44 7.66 -40.82 -0.31 -1.75 16 31 H 0.13 -0.28 6.44 -52.49 -0.34 -0.62 16 32 H 0.14 -0.05 8.06 -52.49 -0.42 -0.48 16 33 H 0.13 0.12 8.06 -52.48 -0.42 -0.30 16 34 H 0.12 0.10 6.77 -52.49 -0.36 -0.26 16 35 H 0.08 -0.36 8.10 -51.93 -0.42 -0.78 16 36 H 0.11 -0.43 7.85 -51.93 -0.41 -0.84 16 37 H 0.38 -2.22 9.12 45.56 0.42 -1.81 16 38 H 0.11 -0.14 6.14 -51.93 -0.32 -0.46 16 39 H 0.09 0.32 7.03 -51.93 -0.36 -0.05 16 40 H 0.21 -1.31 7.48 -52.49 -0.39 -1.70 16 LS Contribution 362.23 15.07 5.46 5.46 Total: 0.00 -10.12 362.23 -10.39 -20.51 By element: Atomic # 1 Polarization: -7.20 SS G_CDS: -3.40 Total: -10.60 kcal Atomic # 6 Polarization: 0.40 SS G_CDS: -3.75 Total: -3.35 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -0.18 Total: 0.35 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -0.77 Total: -3.51 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.46 Total: -6.46 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.29 Total: -2.40 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -10.12 -10.39 -20.51 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_13456056.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.499 kcal (2) G-P(sol) polarization free energy of solvation -10.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.622 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.009 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds