Wall clock time and date at job start Sat Mar 6 2021 23:45:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47184 * 2 1 4 4 C 1.50703 * 109.46811 * 240.00186 * 2 1 3 5 5 C 1.34848 * 125.89161 * 119.95367 * 4 2 1 6 6 C 1.40897 * 107.41801 * 179.80247 * 5 4 2 7 7 C 1.34848 * 107.41573 * 0.38255 * 6 5 4 8 8 C 1.50699 * 125.89005 * 179.88145 * 7 6 5 9 9 C 1.50701 * 109.46859 * 274.69159 * 8 7 6 10 10 O 1.21276 * 120.00380 * 359.97438 * 9 8 7 11 11 N 1.34785 * 119.99663 * 180.02562 * 9 8 7 12 12 C 1.46499 * 119.99827 * 185.42253 * 11 9 8 13 13 C 1.50692 * 112.85314 * 284.43863 * 12 11 9 14 14 C 1.38236 * 119.99254 * 166.72793 * 13 12 11 15 15 C 1.38228 * 120.01154 * 179.72545 * 14 13 12 16 16 C 1.38322 * 119.98798 * 0.55301 * 15 14 13 17 17 Br 1.89099 * 120.01203 * 179.70502 * 16 15 14 18 18 C 1.38332 * 119.97826 * 359.72169 * 16 15 14 19 19 C 1.38220 * 119.99037 * 0.02562 * 18 16 15 20 20 C 1.53958 * 113.53633 * 153.12803 * 12 11 9 21 21 C 1.53778 * 87.02051 * 270.81255 * 20 12 11 22 22 H 1.09001 * 113.61436 * 220.04280 * 21 20 12 23 23 O 1.42905 * 113.61368 * 89.23085 * 21 20 12 24 24 C 1.53780 * 87.17466 * 334.63668 * 21 20 12 25 25 N 1.36342 * 125.89183 * 300.00023 * 4 2 1 26 26 H 0.96697 * 114.00873 * 59.99837 * 1 2 3 27 27 H 1.08996 * 109.47287 * 120.00529 * 2 1 3 28 28 H 1.48501 * 109.99561 * 298.68262 * 3 2 1 29 29 H 1.48500 * 109.99924 * 60.00156 * 3 2 1 30 30 H 1.08001 * 126.29277 * 0.02562 * 5 4 2 31 31 H 1.07996 * 126.28799 * 180.24237 * 6 5 4 32 32 H 1.08997 * 109.47289 * 154.69422 * 8 7 6 33 33 H 1.08994 * 109.46856 * 34.69268 * 8 7 6 34 34 H 0.96998 * 120.00189 * 5.42325 * 11 9 8 35 35 H 1.08000 * 119.99681 * 359.97438 * 14 13 12 36 36 H 1.07995 * 120.00289 * 180.29557 * 15 14 13 37 37 H 1.07998 * 120.00344 * 180.02562 * 18 16 15 38 38 H 1.07996 * 119.99319 * 180.02562 * 19 18 16 39 39 H 1.08998 * 113.61405 * 156.29370 * 20 12 11 40 40 H 1.09003 * 113.66568 * 25.34042 * 20 12 11 41 41 H 0.96702 * 114.00365 * 80.86035 * 23 21 20 42 42 H 1.09008 * 113.61387 * 139.93735 * 24 21 20 43 43 H 1.08996 * 113.61754 * 270.75793 * 24 21 20 44 44 H 0.97002 * 125.63613 * 359.93895 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7090 -0.1724 -2.1918 6 6 2.9480 -1.1759 -3.1516 7 6 2.3002 -2.2863 -2.7446 8 6 2.2747 -3.6089 -3.4664 9 6 1.1812 -3.5943 -4.5032 10 8 0.4902 -2.6073 -4.6421 11 7 0.9704 -4.6786 -5.2756 12 6 -0.0110 -4.6244 -6.3620 13 6 -1.4336 -4.6898 -5.8693 14 6 -2.4754 -4.3776 -6.7226 15 6 -3.7808 -4.4430 -6.2727 16 6 -4.0439 -4.8097 -4.9652 17 35 -5.8291 -4.8912 -4.3467 18 6 -3.0008 -5.1165 -4.1101 19 6 -1.6960 -5.0560 -4.5624 20 6 0.2918 -5.6008 -7.5132 21 6 1.1278 -4.4737 -8.1423 22 1 1.0178 -4.4002 -9.2242 23 8 2.4936 -4.4711 -7.7220 24 6 0.2420 -3.4861 -7.3646 25 7 1.6769 -2.0076 -1.5643 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5139 0.8899 28 1 1.5878 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 3.0832 0.8403 -2.2191 31 1 3.5393 -1.0736 -4.0495 32 1 2.0865 -4.4096 -2.7512 33 1 3.2353 -3.7753 -3.9537 34 1 1.4685 -5.4947 -5.1122 35 1 -2.2696 -4.0865 -7.7420 36 1 -4.5948 -4.2036 -6.9408 37 1 -3.2058 -5.4033 -3.0893 38 1 -0.8816 -5.2959 -3.8949 39 1 -0.5869 -5.8715 -8.0986 40 1 0.8824 -6.4653 -7.2099 41 1 3.0509 -5.1069 -8.1914 42 1 0.7925 -2.6458 -6.9413 43 1 -0.6496 -3.1764 -7.9098 44 1 1.1415 -2.6297 -1.0474 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_14644196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:04 Heat of formation + Delta-G solvation = 0.846095 kcal Electronic energy + Delta-G solvation = -30497.604980 eV Core-core repulsion = 26236.844711 eV Total energy + Delta-G solvation = -4260.760269 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.39270 -41.99075 -39.83925 -39.30321 -37.72489 -36.34928 -34.19838 -33.15990 -32.87713 -31.96142 -31.80351 -30.32100 -29.31207 -27.12467 -25.89140 -24.89064 -23.87859 -22.60618 -21.97084 -21.24397 -20.91538 -20.32643 -18.95730 -18.79912 -18.20326 -17.86622 -17.24611 -16.74832 -16.45158 -16.30893 -16.20918 -15.94130 -15.59521 -15.30698 -15.13732 -14.81366 -14.64019 -14.49954 -14.37110 -14.10096 -13.95579 -13.79835 -13.73080 -13.61237 -13.28007 -13.09597 -12.77667 -12.70791 -12.42437 -12.26581 -12.07726 -11.71392 -11.68366 -11.48191 -11.22153 -11.11162 -10.72654 -10.72192 -10.08246 -10.05184 -9.66801 -9.53206 -8.85528 -4.85049 0.02275 0.27959 0.67673 1.15912 1.36703 1.68781 1.74331 1.90542 2.01835 2.27388 2.49074 2.53140 2.92344 3.28284 3.42046 3.44139 3.52099 3.60233 3.69170 3.75381 3.85882 3.88291 4.00377 4.05114 4.19026 4.28459 4.36918 4.41467 4.46194 4.50247 4.55211 4.60541 4.64592 4.73876 4.79407 4.87231 4.91012 5.01860 5.15533 5.17946 5.30887 5.36841 5.41162 5.62757 5.74275 6.09162 6.24550 6.44445 6.45362 6.53242 6.70565 7.28088 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.055 4.055 3 Si 0.714 3.286 4 C -0.009 4.009 5 C -0.186 4.186 6 C -0.172 4.172 7 C 0.038 3.962 8 C -0.071 4.071 9 C 0.517 3.483 10 O -0.511 6.511 11 N -0.704 5.704 12 C 0.198 3.802 13 C -0.057 4.057 14 C -0.108 4.108 15 C -0.087 4.087 16 C -0.092 4.092 17 Br -0.050 7.050 18 C -0.089 4.089 19 C -0.097 4.097 20 C -0.163 4.163 21 C 0.081 3.919 22 H 0.074 0.926 23 O -0.544 6.544 24 C -0.129 4.129 25 N -0.536 5.536 26 H 0.379 0.621 27 H 0.114 0.886 28 H -0.257 1.257 29 H -0.258 1.258 30 H 0.141 0.859 31 H 0.136 0.864 32 H 0.096 0.904 33 H 0.119 0.881 34 H 0.403 0.597 35 H 0.133 0.867 36 H 0.135 0.865 37 H 0.131 0.869 38 H 0.124 0.876 39 H 0.105 0.895 40 H 0.084 0.916 41 H 0.381 0.619 42 H 0.094 0.906 43 H 0.105 0.895 44 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.274 -5.083 -2.985 7.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.164 4.164 3 Si 0.613 3.387 4 C -0.122 4.122 5 C -0.211 4.211 6 C -0.197 4.197 7 C -0.075 4.075 8 C -0.112 4.112 9 C 0.303 3.697 10 O -0.385 6.385 11 N -0.357 5.357 12 C 0.110 3.890 13 C -0.059 4.059 14 C -0.127 4.127 15 C -0.107 4.107 16 C -0.171 4.171 17 Br 0.035 6.965 18 C -0.108 4.108 19 C -0.116 4.116 20 C -0.201 4.201 21 C 0.021 3.979 22 H 0.092 0.908 23 O -0.349 6.349 24 C -0.167 4.167 25 N -0.130 5.130 26 H 0.228 0.772 27 H 0.132 0.868 28 H -0.181 1.181 29 H -0.183 1.183 30 H 0.158 0.842 31 H 0.154 0.846 32 H 0.115 0.885 33 H 0.137 0.863 34 H 0.238 0.762 35 H 0.151 0.849 36 H 0.152 0.848 37 H 0.149 0.851 38 H 0.142 0.858 39 H 0.124 0.876 40 H 0.102 0.898 41 H 0.228 0.772 42 H 0.113 0.887 43 H 0.123 0.877 44 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 3.682 -3.472 -1.809 5.375 hybrid contribution -0.595 -1.489 -0.717 1.757 sum 3.087 -4.961 -2.527 6.366 Atomic orbital electron populations 1.86557 1.17958 1.80228 1.49636 1.24776 0.83757 1.11418 0.96492 0.94462 0.91413 0.72618 0.80193 1.20761 1.05927 0.85413 1.00122 1.20644 1.04553 0.99966 0.95944 1.20582 1.05678 0.92311 1.01099 1.19455 1.02179 0.96451 0.89428 1.20128 0.99909 0.94606 0.96565 1.20518 0.84602 0.82837 0.81785 1.90774 1.46838 1.32663 1.68217 1.45466 1.41959 1.15444 1.32794 1.19859 0.84712 0.98371 0.86048 1.19973 0.94481 0.97347 0.94083 1.20931 0.91439 1.00218 1.00103 1.21100 0.97431 0.98150 0.93972 1.21833 0.91235 1.07380 0.96667 1.96772 1.13190 1.97616 1.88902 1.21109 0.91720 0.98554 0.99453 1.20873 0.95903 0.99454 0.95401 1.24078 1.01862 0.97758 0.96394 1.22704 0.82192 0.95733 0.97233 0.90792 1.86516 1.18680 1.63827 1.65917 1.23471 0.99554 0.97784 0.95843 1.41778 1.41046 1.10986 1.19216 0.77249 0.86809 1.18149 1.18341 0.84159 0.84621 0.88538 0.86313 0.76179 0.84941 0.84755 0.85124 0.85824 0.87640 0.89786 0.77172 0.88748 0.87677 0.75209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.39 12.88 -35.23 -0.45 -1.85 16 2 C -0.05 -0.05 3.08 36.01 0.11 0.06 16 3 Si 0.71 0.03 30.59 -169.99 -5.20 -5.17 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.43 9.37 -39.78 -0.37 -0.81 16 6 C -0.17 -0.46 10.77 -39.78 -0.43 -0.88 16 7 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 8 C -0.07 0.10 6.24 -29.04 -0.18 -0.08 16 9 C 0.52 0.40 6.70 -10.98 -0.07 0.33 16 10 O -0.51 -2.66 14.43 5.56 0.08 -2.58 16 11 N -0.70 1.16 3.56 -47.84 -0.17 0.99 16 12 C 0.20 -0.19 0.95 -132.07 -0.13 -0.31 16 13 C -0.06 -0.03 4.98 -104.63 -0.52 -0.56 16 14 C -0.11 -0.03 8.73 -39.59 -0.35 -0.37 16 15 C -0.09 -0.10 9.79 -39.55 -0.39 -0.49 16 16 C -0.09 -0.19 6.22 -39.52 -0.25 -0.44 16 17 Br -0.05 -0.11 33.70 -68.01 -2.29 -2.40 16 18 C -0.09 -0.15 9.79 -39.55 -0.39 -0.54 16 19 C -0.10 -0.11 9.15 -39.59 -0.36 -0.47 16 20 C -0.16 0.52 7.16 -25.83 -0.18 0.33 16 21 C 0.08 -0.19 5.27 -25.92 -0.14 -0.32 16 22 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 23 O -0.54 1.04 13.09 -35.23 -0.46 0.57 16 24 C -0.13 0.01 6.52 -25.92 -0.17 -0.16 16 25 N -0.54 -0.76 6.07 -5.44 -0.03 -0.80 16 26 H 0.38 0.27 8.70 45.56 0.40 0.67 16 27 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 28 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 29 H -0.26 -0.75 7.11 56.52 0.40 -0.35 16 30 H 0.14 0.10 6.22 -52.49 -0.33 -0.23 16 31 H 0.14 0.24 8.06 -52.49 -0.42 -0.18 16 32 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 33 H 0.12 -0.36 8.14 -51.93 -0.42 -0.79 16 34 H 0.40 -1.67 8.75 -40.82 -0.36 -2.03 16 35 H 0.13 -0.26 6.54 -52.49 -0.34 -0.60 16 36 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 37 H 0.13 0.09 8.06 -52.49 -0.42 -0.34 16 38 H 0.12 0.00 6.95 -52.49 -0.36 -0.37 16 39 H 0.11 -0.40 7.81 -51.93 -0.41 -0.80 16 40 H 0.08 -0.34 8.13 -51.93 -0.42 -0.77 16 41 H 0.38 -2.21 9.12 45.56 0.42 -1.79 16 42 H 0.09 0.30 6.72 -51.92 -0.35 -0.04 16 43 H 0.11 -0.12 6.22 -51.93 -0.32 -0.44 16 44 H 0.41 -0.04 8.96 -40.82 -0.37 -0.41 16 LS Contribution 386.07 15.07 5.82 5.82 Total: 0.00 -10.07 386.07 -12.11 -22.17 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -4.59 Total: -11.09 kcal Atomic # 6 Polarization: -0.87 SS G_CDS: -4.80 Total: -5.67 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -0.20 Total: 0.19 kcal Atomic # 8 Polarization: -3.01 SS G_CDS: -0.83 Total: -3.85 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: -5.20 Total: -5.17 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.29 Total: -2.40 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -10.07 -12.11 -22.17 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_14644196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.021 kcal (2) G-P(sol) polarization free energy of solvation -10.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.175 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.846 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds