Wall clock time and date at job start Sat Mar 6 2021 23:45:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47184 * 2 1 4 4 C 1.50703 * 109.46811 * 240.00186 * 2 1 3 5 5 C 1.34848 * 125.89161 * 119.95367 * 4 2 1 6 6 C 1.40897 * 107.41801 * 179.80247 * 5 4 2 7 7 C 1.34848 * 107.41573 * 0.38255 * 6 5 4 8 8 C 1.50699 * 125.89005 * 179.88145 * 7 6 5 9 9 C 1.50701 * 109.46859 * 274.69159 * 8 7 6 10 10 O 1.21276 * 120.00380 * 359.97438 * 9 8 7 11 11 N 1.34785 * 119.99663 * 180.02562 * 9 8 7 12 12 C 1.46499 * 119.99827 * 185.42253 * 11 9 8 13 13 C 1.50692 * 112.85314 * 284.43863 * 12 11 9 14 14 C 1.38236 * 119.99254 * 166.72793 * 13 12 11 15 15 C 1.38228 * 120.01154 * 179.72545 * 14 13 12 16 16 C 1.38322 * 119.98798 * 0.55301 * 15 14 13 17 17 Br 1.89099 * 120.01203 * 179.70502 * 16 15 14 18 18 C 1.38332 * 119.97826 * 359.72169 * 16 15 14 19 19 C 1.38220 * 119.99037 * 0.02562 * 18 16 15 20 20 C 1.53958 * 113.53633 * 153.12803 * 12 11 9 21 21 C 1.53778 * 87.02051 * 270.81255 * 20 12 11 22 22 H 1.09001 * 113.61436 * 220.04280 * 21 20 12 23 23 O 1.42905 * 113.61368 * 89.23085 * 21 20 12 24 24 C 1.53780 * 87.17466 * 334.63668 * 21 20 12 25 25 N 1.36342 * 125.89183 * 300.00023 * 4 2 1 26 26 H 0.96697 * 114.00873 * 59.99837 * 1 2 3 27 27 H 1.08996 * 109.47287 * 120.00529 * 2 1 3 28 28 H 1.48501 * 109.99561 * 298.68262 * 3 2 1 29 29 H 1.48500 * 109.99924 * 60.00156 * 3 2 1 30 30 H 1.08001 * 126.29277 * 0.02562 * 5 4 2 31 31 H 1.07996 * 126.28799 * 180.24237 * 6 5 4 32 32 H 1.08997 * 109.47289 * 154.69422 * 8 7 6 33 33 H 1.08994 * 109.46856 * 34.69268 * 8 7 6 34 34 H 0.96998 * 120.00189 * 5.42325 * 11 9 8 35 35 H 1.08000 * 119.99681 * 359.97438 * 14 13 12 36 36 H 1.07995 * 120.00289 * 180.29557 * 15 14 13 37 37 H 1.07998 * 120.00344 * 180.02562 * 18 16 15 38 38 H 1.07996 * 119.99319 * 180.02562 * 19 18 16 39 39 H 1.08998 * 113.61405 * 156.29370 * 20 12 11 40 40 H 1.09003 * 113.66568 * 25.34042 * 20 12 11 41 41 H 0.96702 * 114.00365 * 80.86035 * 23 21 20 42 42 H 1.09008 * 113.61387 * 139.93735 * 24 21 20 43 43 H 1.08996 * 113.61754 * 270.75793 * 24 21 20 44 44 H 0.97002 * 125.63613 * 359.93895 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7090 -0.1724 -2.1918 6 6 2.9480 -1.1759 -3.1516 7 6 2.3002 -2.2863 -2.7446 8 6 2.2747 -3.6089 -3.4664 9 6 1.1812 -3.5943 -4.5032 10 8 0.4902 -2.6073 -4.6421 11 7 0.9704 -4.6786 -5.2756 12 6 -0.0110 -4.6244 -6.3620 13 6 -1.4336 -4.6898 -5.8693 14 6 -2.4754 -4.3776 -6.7226 15 6 -3.7808 -4.4430 -6.2727 16 6 -4.0439 -4.8097 -4.9652 17 35 -5.8291 -4.8912 -4.3467 18 6 -3.0008 -5.1165 -4.1101 19 6 -1.6960 -5.0560 -4.5624 20 6 0.2918 -5.6008 -7.5132 21 6 1.1278 -4.4737 -8.1423 22 1 1.0178 -4.4002 -9.2242 23 8 2.4936 -4.4711 -7.7220 24 6 0.2420 -3.4861 -7.3646 25 7 1.6769 -2.0076 -1.5643 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5139 0.8899 28 1 1.5878 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 3.0832 0.8403 -2.2191 31 1 3.5393 -1.0736 -4.0495 32 1 2.0865 -4.4096 -2.7512 33 1 3.2353 -3.7753 -3.9537 34 1 1.4685 -5.4947 -5.1122 35 1 -2.2696 -4.0865 -7.7420 36 1 -4.5948 -4.2036 -6.9408 37 1 -3.2058 -5.4033 -3.0893 38 1 -0.8816 -5.2959 -3.8949 39 1 -0.5869 -5.8715 -8.0986 40 1 0.8824 -6.4653 -7.2099 41 1 3.0509 -5.1069 -8.1914 42 1 0.7925 -2.6458 -6.9413 43 1 -0.6496 -3.1764 -7.9098 44 1 1.1415 -2.6297 -1.0474 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_14644196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:02 Heat of formation + Delta-G solvation = -1.318989 kcal Electronic energy + Delta-G solvation = -30497.698865 eV Core-core repulsion = 26236.844711 eV Total energy + Delta-G solvation = -4260.854154 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.42173 -41.97911 -39.89134 -39.25435 -37.87162 -36.22387 -34.19521 -33.19966 -32.88861 -31.99523 -31.90704 -30.37896 -29.35730 -26.97628 -25.87354 -24.91811 -23.90339 -22.60973 -21.93712 -21.35419 -20.98329 -20.25838 -19.05801 -18.70901 -18.16558 -17.76820 -17.24964 -16.79169 -16.44667 -16.39827 -16.21879 -15.95813 -15.52824 -15.33375 -15.16679 -14.80445 -14.65385 -14.58571 -14.40618 -14.16890 -14.05097 -13.86839 -13.72257 -13.57427 -13.19834 -13.07244 -12.76552 -12.58288 -12.41505 -12.27688 -12.20992 -11.88024 -11.69218 -11.43790 -11.35644 -10.91694 -10.84683 -10.79336 -10.10014 -10.03543 -9.79672 -9.58959 -8.95968 -4.89892 -0.03080 0.23319 0.56631 1.07674 1.30246 1.65907 1.68384 1.84644 1.92564 2.26845 2.46280 2.49153 3.14705 3.34631 3.44806 3.56126 3.65105 3.69297 3.71767 3.79180 3.81671 3.84667 4.10791 4.20539 4.24188 4.36882 4.41186 4.42831 4.50904 4.58366 4.63223 4.67016 4.79470 4.83011 4.83701 4.92039 4.98857 5.03258 5.13354 5.13591 5.25472 5.28967 5.32101 5.67908 5.72317 5.98104 6.13060 6.35316 6.55878 6.67914 6.95086 7.33131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.062 4.062 3 Si 0.798 3.202 4 C -0.018 4.018 5 C -0.201 4.201 6 C -0.200 4.200 7 C 0.039 3.961 8 C -0.068 4.068 9 C 0.517 3.483 10 O -0.562 6.562 11 N -0.690 5.690 12 C 0.192 3.808 13 C -0.061 4.061 14 C -0.111 4.111 15 C -0.095 4.095 16 C -0.107 4.107 17 Br -0.059 7.059 18 C -0.101 4.101 19 C -0.107 4.107 20 C -0.147 4.147 21 C 0.088 3.912 22 H 0.089 0.911 23 O -0.562 6.562 24 C -0.139 4.139 25 N -0.536 5.536 26 H 0.384 0.616 27 H 0.128 0.872 28 H -0.293 1.293 29 H -0.295 1.295 30 H 0.150 0.850 31 H 0.137 0.863 32 H 0.126 0.874 33 H 0.139 0.861 34 H 0.418 0.582 35 H 0.154 0.846 36 H 0.144 0.856 37 H 0.135 0.865 38 H 0.133 0.867 39 H 0.116 0.884 40 H 0.100 0.900 41 H 0.398 0.602 42 H 0.057 0.943 43 H 0.110 0.890 44 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.324 -6.777 -3.650 9.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.171 4.171 3 Si 0.702 3.298 4 C -0.131 4.131 5 C -0.226 4.226 6 C -0.225 4.225 7 C -0.075 4.075 8 C -0.108 4.108 9 C 0.303 3.697 10 O -0.439 6.439 11 N -0.342 5.342 12 C 0.104 3.896 13 C -0.063 4.063 14 C -0.130 4.130 15 C -0.115 4.115 16 C -0.187 4.187 17 Br 0.027 6.973 18 C -0.121 4.121 19 C -0.126 4.126 20 C -0.185 4.185 21 C 0.029 3.971 22 H 0.106 0.894 23 O -0.370 6.370 24 C -0.177 4.177 25 N -0.131 5.131 26 H 0.233 0.767 27 H 0.146 0.854 28 H -0.220 1.220 29 H -0.223 1.223 30 H 0.167 0.833 31 H 0.155 0.845 32 H 0.144 0.856 33 H 0.157 0.843 34 H 0.255 0.745 35 H 0.171 0.829 36 H 0.162 0.838 37 H 0.152 0.848 38 H 0.150 0.850 39 H 0.134 0.866 40 H 0.118 0.882 41 H 0.248 0.752 42 H 0.076 0.924 43 H 0.129 0.871 44 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges 4.764 -5.238 -2.483 7.503 hybrid contribution -0.914 -0.930 -0.548 1.415 sum 3.850 -6.168 -3.031 7.878 Atomic orbital electron populations 1.86530 1.18954 1.80542 1.50124 1.25007 0.83016 1.12256 0.96771 0.93461 0.90034 0.70246 0.76043 1.20873 1.06054 0.85785 1.00395 1.20886 1.04988 1.00551 0.96188 1.20800 1.06908 0.93183 1.01602 1.19855 1.01051 0.97376 0.89217 1.20238 1.00045 0.94020 0.96502 1.20861 0.84379 0.82485 0.81928 1.90760 1.48827 1.34566 1.69761 1.45351 1.41458 1.15438 1.32002 1.19983 0.84025 0.99062 0.86489 1.20229 0.95468 0.96606 0.93950 1.21208 0.91010 0.99624 1.01153 1.21318 0.98274 0.98064 0.93847 1.21955 0.90956 1.08454 0.97313 1.96745 1.13836 1.97697 1.89055 1.21249 0.92069 0.98974 0.99767 1.21043 0.95901 0.99667 0.95943 1.24031 1.02150 0.97507 0.94778 1.22645 0.81969 0.94858 0.97675 0.89351 1.86474 1.19071 1.64818 1.66628 1.23530 1.00194 0.97173 0.96848 1.41859 1.40925 1.10995 1.19345 0.76658 0.85446 1.21995 1.22304 0.83295 0.84548 0.85579 0.84334 0.74460 0.82854 0.83774 0.84759 0.84959 0.86591 0.88168 0.75175 0.92423 0.87140 0.74465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.30 12.88 -148.98 -1.92 -5.22 16 2 C -0.06 -0.14 3.08 71.24 0.22 0.08 16 3 Si 0.80 0.66 30.59 68.60 2.10 2.76 16 4 C -0.02 -0.08 6.50 41.08 0.27 0.19 16 5 C -0.20 -1.14 9.37 22.14 0.21 -0.93 16 6 C -0.20 -1.25 10.77 22.14 0.24 -1.02 16 7 C 0.04 0.13 5.66 41.08 0.23 0.36 16 8 C -0.07 0.25 6.24 29.10 0.18 0.43 16 9 C 0.52 0.80 6.70 87.66 0.59 1.39 16 10 O -0.56 -6.57 14.43 -3.02 -0.04 -6.61 16 11 N -0.69 2.81 3.56 -423.64 -1.51 1.30 16 12 C 0.19 -0.49 0.95 3.44 0.00 -0.48 16 13 C -0.06 -0.06 4.98 -19.87 -0.10 -0.16 16 14 C -0.11 -0.04 8.73 22.27 0.19 0.16 16 15 C -0.10 -0.25 9.79 22.29 0.22 -0.03 16 16 C -0.11 -0.53 6.22 22.31 0.14 -0.39 16 17 Br -0.06 -0.31 33.70 -20.37 -0.69 -1.00 16 18 C -0.10 -0.42 9.79 22.29 0.22 -0.20 16 19 C -0.11 -0.26 9.15 22.27 0.20 -0.06 16 20 C -0.15 1.22 7.16 31.18 0.22 1.45 16 21 C 0.09 -0.52 5.27 31.12 0.16 -0.35 16 22 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 23 O -0.56 2.83 13.09 -148.98 -1.95 0.88 16 24 C -0.14 -0.01 6.52 31.12 0.20 0.19 16 25 N -0.54 -1.68 6.07 -171.12 -1.04 -2.72 16 26 H 0.38 1.06 8.70 -74.06 -0.64 0.41 16 27 H 0.13 -0.09 7.96 -2.39 -0.02 -0.11 16 28 H -0.29 -1.96 7.11 99.48 0.71 -1.26 16 29 H -0.30 -2.06 7.11 99.48 0.71 -1.35 16 30 H 0.15 0.37 6.22 -2.91 -0.02 0.35 16 31 H 0.14 0.68 8.06 -2.91 -0.02 0.65 16 32 H 0.13 -1.23 8.14 -2.39 -0.02 -1.25 16 33 H 0.14 -1.05 8.14 -2.39 -0.02 -1.07 16 34 H 0.42 -4.21 8.75 -92.71 -0.81 -5.02 16 35 H 0.15 -0.73 6.54 -2.91 -0.02 -0.74 16 36 H 0.14 -0.04 8.06 -2.91 -0.02 -0.07 16 37 H 0.13 0.31 8.06 -2.91 -0.02 0.29 16 38 H 0.13 -0.04 6.95 -2.91 -0.02 -0.06 16 39 H 0.12 -1.15 7.81 -2.39 -0.02 -1.17 16 40 H 0.10 -1.11 8.13 -2.39 -0.02 -1.13 16 41 H 0.40 -5.31 9.12 -74.06 -0.68 -5.99 16 42 H 0.06 0.47 6.72 -2.38 -0.02 0.46 16 43 H 0.11 -0.22 6.22 -2.39 -0.01 -0.24 16 44 H 0.42 -0.07 8.96 -92.71 -0.83 -0.90 16 Total: 0.00 -25.49 386.07 -3.47 -28.96 By element: Atomic # 1 Polarization: -17.17 SS G_CDS: -1.82 Total: -18.99 kcal Atomic # 6 Polarization: -2.78 SS G_CDS: 3.40 Total: 0.62 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -2.55 Total: -1.41 kcal Atomic # 8 Polarization: -7.04 SS G_CDS: -3.91 Total: -10.95 kcal Atomic # 14 Polarization: 0.66 SS G_CDS: 2.10 Total: 2.76 kcal Atomic # 35 Polarization: -0.31 SS G_CDS: -0.69 Total: -1.00 kcal Total: -25.49 -3.47 -28.96 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_14644196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.642 kcal (2) G-P(sol) polarization free energy of solvation -25.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.151 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.470 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.961 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.319 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds