Wall clock time and date at job start Sat Mar 6 2021 23:45:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86305 * 109.46895 * 2 1 4 4 C 1.50697 * 109.46985 * 239.99963 * 2 1 3 5 5 C 1.31116 * 118.54550 * 120.00065 * 4 2 1 6 6 N 1.38927 * 121.85076 * 180.40544 * 5 4 2 7 7 C 1.47030 * 118.87992 * 346.95632 * 6 5 4 8 8 C 1.50705 * 109.81875 * 162.93091 * 7 6 5 9 9 O 1.21279 * 119.99653 * 339.99788 * 8 7 6 10 10 N 1.34770 * 119.99648 * 160.00011 * 8 7 6 11 11 C 1.46506 * 119.99638 * 175.30434 * 10 8 7 12 12 C 1.50701 * 112.85082 * 292.07202 * 11 10 8 13 13 C 1.38244 * 119.98971 * 164.89450 * 12 11 10 14 14 C 1.38220 * 120.00667 * 179.72545 * 13 12 11 15 15 C 1.38319 * 119.98978 * 0.55191 * 14 13 12 16 16 Br 1.89106 * 120.00797 * 179.70416 * 15 14 13 17 17 C 1.38327 * 119.98300 * 359.72111 * 15 14 13 18 18 C 1.38217 * 119.99006 * 0.02562 * 17 15 14 19 19 C 1.53785 * 113.61434 * 160.76735 * 11 10 8 20 20 C 1.53778 * 87.07778 * 270.88551 * 19 11 10 21 21 H 1.09003 * 113.61103 * 220.01790 * 20 19 11 22 22 O 1.42898 * 113.69281 * 89.12904 * 20 19 11 23 23 C 1.53777 * 87.08446 * 334.56435 * 20 19 11 24 24 C 1.53144 * 107.86263 * 43.31422 * 7 6 5 25 25 C 1.50197 * 118.55109 * 300.01723 * 4 2 1 26 26 H 0.96704 * 114.00260 * 299.99702 * 1 2 3 27 27 H 1.08996 * 109.47009 * 119.99913 * 2 1 3 28 28 H 1.48493 * 109.99848 * 178.67952 * 3 2 1 29 29 H 1.48500 * 109.99806 * 300.00064 * 3 2 1 30 30 H 1.08008 * 119.07757 * 0.37779 * 5 4 2 31 31 H 0.97002 * 120.55645 * 166.68635 * 6 5 4 32 32 H 1.09000 * 109.82373 * 283.84923 * 7 6 5 33 33 H 0.96998 * 120.00614 * 355.30551 * 10 8 7 34 34 H 1.07997 * 119.98937 * 359.97438 * 13 12 11 35 35 H 1.08004 * 120.00239 * 180.29668 * 14 13 12 36 36 H 1.07997 * 120.00389 * 179.97438 * 17 15 14 37 37 H 1.08000 * 119.99869 * 180.02562 * 18 17 15 38 38 H 1.08998 * 113.61151 * 25.42956 * 19 11 10 39 39 H 1.08994 * 113.61313 * 156.33520 * 19 11 10 40 40 H 0.96697 * 114.00240 * 82.46292 * 22 20 19 41 41 H 1.08996 * 113.61939 * 270.88795 * 23 20 19 42 42 H 1.09007 * 113.69249 * 139.99003 * 23 20 19 43 43 H 1.09000 * 109.66445 * 179.48884 * 24 7 6 44 44 H 1.08995 * 109.60056 * 59.10578 * 24 7 6 45 45 H 1.09002 * 109.32897 * 280.21341 * 25 4 2 46 46 H 1.09006 * 109.32887 * 39.69093 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.6831 -0.0460 -2.0745 6 7 3.1763 -0.6306 -3.2342 7 6 3.0958 -2.0912 -3.3829 8 6 3.2844 -2.4687 -4.8296 9 8 3.1077 -1.6427 -5.6998 10 7 3.6493 -3.7243 -5.1562 11 6 3.7327 -4.1199 -6.5644 12 6 2.3866 -4.1642 -7.2406 13 6 2.3074 -4.2096 -8.6200 14 6 1.0731 -4.2559 -9.2403 15 6 -0.0831 -4.2453 -8.4811 16 35 -1.7722 -4.3003 -9.3296 17 6 -0.0034 -4.1942 -7.1011 18 6 1.2313 -4.1532 -6.4814 19 6 4.5849 -5.3780 -6.8014 20 6 5.7937 -4.4375 -6.9388 21 1 6.4844 -4.7270 -7.7308 22 8 6.4525 -4.1645 -5.7004 23 6 4.7965 -3.3452 -7.3600 24 6 1.7097 -2.5360 -2.9074 25 6 1.5483 -2.1481 -1.4359 26 1 -0.3934 0.4417 0.7651 27 1 1.7923 -0.5138 0.8900 28 1 3.5345 1.7704 0.0322 29 1 1.5614 2.4679 -1.2085 30 1 2.9254 0.9850 -1.8625 31 1 3.5637 -0.0841 -3.9358 32 1 3.8631 -2.5677 -2.7727 33 1 3.8567 -4.3661 -4.4591 34 1 3.2102 -4.2129 -9.2127 35 1 1.0114 -4.2962 -10.3178 36 1 -0.9059 -4.1855 -6.5080 37 1 1.2937 -4.1137 -5.4039 38 1 4.6407 -6.0370 -5.9350 39 1 4.3362 -5.9067 -7.7215 40 1 7.0810 -4.8478 -5.4302 41 1 4.6058 -3.3183 -8.4328 42 1 5.0222 -2.3626 -6.9454 43 1 1.6148 -3.6167 -3.0137 44 1 0.9426 -2.0409 -3.5028 45 1 2.1882 -2.7831 -0.8231 46 1 0.5098 -2.2911 -1.1369 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_15413834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:06 Heat of formation + Delta-G solvation = -21.764125 kcal Electronic energy + Delta-G solvation = -31509.415738 eV Core-core repulsion = 27220.363538 eV Total energy + Delta-G solvation = -4289.052200 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.072 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.34354 -40.81351 -39.63372 -39.09836 -37.37097 -36.31517 -34.43432 -33.37134 -33.20761 -32.94861 -32.01911 -30.37642 -27.80410 -27.00240 -25.70831 -25.24679 -24.06521 -23.58083 -22.54497 -21.84871 -20.39323 -19.35714 -19.17187 -18.70077 -18.23786 -17.88092 -17.53266 -17.16514 -16.62278 -16.43039 -15.99861 -15.91377 -15.58370 -15.40119 -15.31898 -14.94222 -14.77142 -14.69879 -14.44356 -14.40566 -14.22020 -13.80169 -13.74913 -13.39867 -13.30901 -13.16092 -13.07599 -12.62789 -12.50251 -12.44663 -12.29873 -12.14645 -11.73825 -11.62898 -11.46053 -11.40223 -11.35074 -10.98065 -10.81955 -10.17285 -10.14989 -10.11084 -9.60618 -8.58164 -4.94082 -0.05007 0.22068 0.56386 1.15171 1.37591 1.39818 1.61676 1.74978 1.97294 2.43880 2.47164 3.08968 3.36805 3.42473 3.50830 3.53178 3.60352 3.64953 3.70179 3.82688 3.83655 3.89785 3.97534 4.15627 4.21659 4.30990 4.33458 4.36717 4.51284 4.55847 4.56678 4.63945 4.69161 4.79072 4.81283 4.84313 4.94502 4.96060 4.98554 5.09203 5.10509 5.12460 5.17797 5.26232 5.45857 5.57006 5.70479 6.10126 6.38592 6.60475 6.89602 7.01992 7.08178 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.567 6.567 2 C -0.050 4.050 3 Si 0.752 3.248 4 C -0.241 4.241 5 C 0.114 3.886 6 N -0.740 5.740 7 C 0.140 3.860 8 C 0.519 3.481 9 O -0.560 6.560 10 N -0.682 5.682 11 C 0.189 3.811 12 C -0.062 4.062 13 C -0.109 4.109 14 C -0.094 4.094 15 C -0.106 4.106 16 Br -0.057 7.057 17 C -0.100 4.100 18 C -0.110 4.110 19 C -0.145 4.145 20 C 0.087 3.913 21 H 0.093 0.907 22 O -0.565 6.565 23 C -0.140 4.140 24 C -0.121 4.121 25 C -0.051 4.051 26 H 0.398 0.602 27 H 0.085 0.915 28 H -0.290 1.290 29 H -0.308 1.308 30 H 0.114 0.886 31 H 0.403 0.597 32 H 0.109 0.891 33 H 0.419 0.581 34 H 0.156 0.844 35 H 0.146 0.854 36 H 0.135 0.865 37 H 0.131 0.869 38 H 0.100 0.900 39 H 0.121 0.879 40 H 0.399 0.601 41 H 0.115 0.885 42 H 0.055 0.945 43 H 0.106 0.894 44 H 0.050 0.950 45 H 0.085 0.915 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.526 -6.176 4.461 8.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.162 4.162 3 Si 0.660 3.340 4 C -0.251 4.251 5 C -0.006 4.006 6 N -0.372 5.372 7 C 0.031 3.969 8 C 0.305 3.695 9 O -0.438 6.438 10 N -0.333 5.333 11 C 0.102 3.898 12 C -0.063 4.063 13 C -0.128 4.128 14 C -0.113 4.113 15 C -0.186 4.186 16 Br 0.028 6.972 17 C -0.119 4.119 18 C -0.129 4.129 19 C -0.183 4.183 20 C 0.027 3.973 21 H 0.110 0.890 22 O -0.373 6.373 23 C -0.178 4.178 24 C -0.160 4.160 25 C -0.088 4.088 26 H 0.248 0.752 27 H 0.103 0.897 28 H -0.218 1.218 29 H -0.236 1.236 30 H 0.131 0.869 31 H 0.239 0.761 32 H 0.127 0.873 33 H 0.257 0.743 34 H 0.174 0.826 35 H 0.164 0.836 36 H 0.152 0.848 37 H 0.149 0.851 38 H 0.119 0.881 39 H 0.139 0.861 40 H 0.249 0.751 41 H 0.133 0.867 42 H 0.074 0.926 43 H 0.124 0.876 44 H 0.069 0.931 45 H 0.103 0.897 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 3.958 -4.951 2.569 6.839 hybrid contribution 0.709 -0.359 -0.157 0.810 sum 4.667 -5.310 2.412 7.470 Atomic orbital electron populations 1.86435 1.18034 1.82117 1.51035 1.24442 0.85179 1.08717 0.97830 0.94720 0.77222 0.77178 0.84831 1.20453 1.05735 0.98994 0.99968 1.20185 0.96549 0.95731 0.88151 1.44270 1.68509 1.05532 1.18926 1.21033 1.00283 0.82954 0.92590 1.20655 0.75594 0.82453 0.90787 1.90730 1.51215 1.50500 1.51356 1.45297 1.68538 1.12178 1.07331 1.20034 0.90065 0.98304 0.81421 1.20139 0.94773 0.97380 0.94040 1.21206 0.98136 0.99718 0.93714 1.21328 0.90895 0.98208 1.00905 1.21965 0.91920 1.09239 0.95428 1.96749 1.22909 1.97651 1.79863 1.21243 0.99097 0.98784 0.92811 1.21066 0.91442 0.99806 1.00567 1.24010 0.94124 0.94739 1.05382 1.22675 0.92756 0.94608 0.87223 0.88956 1.86473 1.60624 1.51154 1.39091 1.23590 0.94441 0.98659 1.01134 1.21775 0.94047 1.02687 0.97452 1.19978 1.02397 0.91774 0.94686 0.75197 0.89729 1.21795 1.23639 0.86917 0.76136 0.87313 0.74291 0.82618 0.83578 0.84752 0.85134 0.88122 0.86111 0.75094 0.86654 0.92647 0.87576 0.93117 0.89668 0.90440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.99 12.51 -148.98 -1.86 -2.86 16 2 C -0.05 -0.06 2.82 71.23 0.20 0.14 16 3 Si 0.75 0.52 29.68 68.60 2.04 2.55 16 4 C -0.24 -1.27 5.48 -16.76 -0.09 -1.36 16 5 C 0.11 0.84 9.63 83.41 0.80 1.65 16 6 N -0.74 -4.98 5.47 -329.62 -1.80 -6.78 16 7 C 0.14 0.25 3.35 44.19 0.15 0.40 16 8 C 0.52 2.01 5.60 87.66 0.49 2.50 16 9 O -0.56 -7.01 14.56 -3.03 -0.04 -7.06 16 10 N -0.68 1.66 3.76 -423.91 -1.60 0.06 16 11 C 0.19 -0.40 0.93 3.38 0.00 -0.39 16 12 C -0.06 -0.08 4.83 -19.86 -0.10 -0.18 16 13 C -0.11 -0.02 8.81 22.27 0.20 0.18 16 14 C -0.09 -0.23 9.79 22.28 0.22 -0.01 16 15 C -0.11 -0.55 6.22 22.31 0.14 -0.41 16 16 Br -0.06 -0.31 33.70 -20.37 -0.69 -0.99 16 17 C -0.10 -0.48 9.79 22.29 0.22 -0.26 16 18 C -0.11 -0.36 8.97 22.27 0.20 -0.16 16 19 C -0.14 1.21 7.13 31.12 0.22 1.43 16 20 C 0.09 -0.52 5.27 31.12 0.16 -0.36 16 21 H 0.09 -0.85 8.14 -2.39 -0.02 -0.86 16 22 O -0.57 2.52 13.09 -148.98 -1.95 0.57 16 23 C -0.14 0.03 6.56 31.12 0.20 0.23 16 24 C -0.12 -0.09 5.45 30.65 0.17 0.08 16 25 C -0.05 -0.08 5.84 29.70 0.17 0.09 16 26 H 0.40 -3.36 8.74 -74.05 -0.65 -4.01 16 27 H 0.08 -0.25 7.96 -2.39 -0.02 -0.27 16 28 H -0.29 -1.67 7.11 99.48 0.71 -0.97 16 29 H -0.31 -2.96 7.11 99.48 0.71 -2.26 16 30 H 0.11 0.89 4.37 -2.91 -0.01 0.88 16 31 H 0.40 3.36 8.12 -92.71 -0.75 2.61 16 32 H 0.11 -0.25 8.14 -2.39 -0.02 -0.27 16 33 H 0.42 -3.34 8.68 -92.71 -0.80 -4.14 16 34 H 0.16 -0.82 6.43 -2.91 -0.02 -0.84 16 35 H 0.15 -0.10 8.06 -2.91 -0.02 -0.12 16 36 H 0.13 0.43 8.06 -2.91 -0.02 0.41 16 37 H 0.13 0.14 6.79 -2.91 -0.02 0.12 16 38 H 0.10 -1.11 8.10 -2.39 -0.02 -1.13 16 39 H 0.12 -1.26 7.85 -2.39 -0.02 -1.28 16 40 H 0.40 -5.11 9.12 -74.06 -0.68 -5.78 16 41 H 0.12 -0.34 6.13 -2.39 -0.01 -0.35 16 42 H 0.05 0.43 7.03 -2.38 -0.02 0.41 16 43 H 0.11 -0.55 8.14 -2.39 -0.02 -0.57 16 44 H 0.05 0.33 8.14 -2.39 -0.02 0.31 16 45 H 0.09 -0.18 8.14 -2.39 -0.02 -0.20 16 46 H 0.08 0.25 7.82 -2.38 -0.02 0.23 16 Total: 0.00 -24.68 387.43 -4.32 -29.00 By element: Atomic # 1 Polarization: -16.32 SS G_CDS: -1.77 Total: -18.08 kcal Atomic # 6 Polarization: 0.22 SS G_CDS: 3.36 Total: 3.58 kcal Atomic # 7 Polarization: -3.32 SS G_CDS: -3.40 Total: -6.71 kcal Atomic # 8 Polarization: -5.48 SS G_CDS: -3.86 Total: -9.34 kcal Atomic # 14 Polarization: 0.52 SS G_CDS: 2.04 Total: 2.55 kcal Atomic # 35 Polarization: -0.31 SS G_CDS: -0.69 Total: -0.99 kcal Total: -24.68 -4.32 -29.00 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_15413834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.235 kcal (2) G-P(sol) polarization free energy of solvation -24.684 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.449 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.999 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.764 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds