Wall clock time and date at job start Sat Mar 6 2021 23:45:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.46949 * 2 1 4 4 C 1.50707 * 109.47031 * 119.99441 * 2 1 3 5 5 C 1.38710 * 120.02521 * 74.97881 * 4 2 1 6 6 O 1.35902 * 120.05675 * 0.02562 * 5 4 2 7 7 C 1.42895 * 117.00232 * 179.97438 * 6 5 4 8 8 C 1.50703 * 109.47516 * 179.97438 * 7 6 5 9 9 O 1.21275 * 119.99706 * 0.02562 * 8 7 6 10 10 N 1.34770 * 120.00036 * 180.02562 * 8 7 6 11 11 C 1.46504 * 120.00021 * 175.26883 * 10 8 7 12 12 C 1.50707 * 112.84773 * 72.62558 * 11 10 8 13 13 C 1.38238 * 119.98589 * 192.97246 * 12 11 10 14 14 C 1.38220 * 120.00546 * 179.77379 * 13 12 11 15 15 C 1.38325 * 119.99021 * 0.49901 * 14 13 12 16 16 Br 1.89100 * 120.00993 * 179.77051 * 15 14 13 17 17 C 1.38323 * 119.98264 * 359.75535 * 15 14 13 18 18 C 1.38223 * 119.98618 * 359.97438 * 17 15 14 19 19 C 1.53776 * 113.61347 * 301.43131 * 11 10 8 20 20 C 1.53775 * 87.08014 * 270.88396 * 19 11 10 21 21 H 1.09003 * 113.61329 * 220.01905 * 20 19 11 22 22 O 1.42897 * 113.61468 * 89.11932 * 20 19 11 23 23 C 1.53774 * 113.61500 * 203.93126 * 11 10 8 24 24 C 1.38753 * 119.88938 * 180.02562 * 5 4 2 25 25 C 1.38128 * 119.94155 * 0.02562 * 24 5 4 26 26 C 1.38286 * 120.05480 * 359.97438 * 25 24 5 27 27 C 1.38163 * 120.03093 * 255.00174 * 4 2 1 28 28 H 0.96705 * 114.00124 * 299.99975 * 1 2 3 29 29 H 1.08992 * 109.47239 * 239.99505 * 2 1 3 30 30 H 1.48504 * 109.99916 * 299.99564 * 3 2 1 31 31 H 1.48500 * 110.00254 * 61.31845 * 3 2 1 32 32 H 1.09003 * 109.47295 * 300.00088 * 7 6 5 33 33 H 1.09009 * 109.47026 * 59.99882 * 7 6 5 34 34 H 0.97000 * 120.00552 * 355.26471 * 10 8 7 35 35 H 1.08003 * 119.99959 * 0.02562 * 13 12 11 36 36 H 1.08000 * 120.00326 * 180.23823 * 14 13 12 37 37 H 1.07999 * 120.01059 * 179.97438 * 17 15 14 38 38 H 1.08005 * 119.99426 * 180.02562 * 18 17 15 39 39 H 1.09007 * 113.61257 * 25.43568 * 19 11 10 40 40 H 1.08998 * 113.61516 * 156.33301 * 19 11 10 41 41 H 0.96704 * 113.99992 * 180.02562 * 22 20 19 42 42 H 1.08996 * 113.61631 * 203.66057 * 23 11 10 43 43 H 1.08994 * 113.61767 * 334.56791 * 23 11 10 44 44 H 1.08000 * 120.02901 * 180.02562 * 24 5 4 45 45 H 1.07994 * 119.96916 * 179.97438 * 25 24 5 46 46 H 1.08000 * 119.93837 * 180.27699 * 26 25 24 47 47 H 1.07999 * 119.97094 * 359.95379 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.8692 -2.0939 1.3073 6 8 1.3560 -2.8106 0.2730 7 6 1.3238 -4.2315 0.4211 8 6 0.7260 -4.8522 -0.8152 9 8 0.3635 -4.1471 -1.7330 10 7 0.5941 -6.1907 -0.9009 11 6 -0.0807 -6.7878 -2.0561 12 6 0.7453 -6.7215 -3.3149 13 6 0.1619 -6.9906 -4.5390 14 6 0.9180 -6.9254 -5.6942 15 6 2.2608 -6.6010 -5.6243 16 35 3.2972 -6.5180 -7.2039 17 6 2.8453 -6.3370 -4.3988 18 6 2.0872 -6.3970 -3.2446 19 6 -1.5280 -6.3026 -2.2427 20 6 -1.9519 -7.4635 -1.3277 21 1 -2.8656 -7.9626 -1.6505 22 8 -1.9644 -7.1233 0.0601 23 6 -0.6672 -8.1811 -1.7745 24 6 2.3320 -2.7450 2.4419 25 6 2.8528 -2.0142 3.4920 26 6 2.9136 -0.6349 3.4129 27 6 2.4537 0.0160 2.2834 28 1 -0.3934 0.4417 0.7651 29 1 1.7923 -0.5139 -0.8899 30 1 1.5615 2.4678 -1.2086 31 1 1.5878 2.4586 1.2242 32 1 2.3381 -4.6053 0.5616 33 1 0.7170 -4.4928 1.2882 34 1 0.9459 -6.7588 -0.1978 35 1 -0.8856 -7.2477 -4.5931 36 1 0.4613 -7.1318 -6.6509 37 1 3.8939 -6.0841 -4.3436 38 1 2.5433 -6.1905 -2.2876 39 1 -1.7170 -5.3180 -1.8149 40 1 -1.8919 -6.3977 -3.2657 41 1 -2.2299 -7.8497 0.6408 42 1 -0.7959 -8.7897 -2.6696 43 1 -0.1615 -8.7131 -0.9688 44 1 2.2851 -3.8222 2.5038 45 1 3.2127 -2.5204 4.3754 46 1 3.3252 -0.0656 4.2332 47 1 2.5026 1.0933 2.2240 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_2989392.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:18 Heat of formation + Delta-G solvation = -44.205422 kcal Electronic energy + Delta-G solvation = -34125.343684 eV Core-core repulsion = 29481.147413 eV Total energy + Delta-G solvation = -4644.196270 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.061 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.26385 -41.41678 -40.00121 -39.40580 -38.43020 -37.61981 -36.28613 -34.26274 -33.19172 -32.75995 -32.04845 -31.24043 -30.40159 -29.31674 -27.00770 -26.70646 -25.56375 -23.99677 -23.55236 -22.65266 -22.47222 -21.67818 -20.36372 -19.49404 -18.74980 -18.51775 -18.08003 -17.74912 -17.37934 -17.07499 -16.93209 -16.59360 -16.42052 -16.14071 -15.88320 -15.70286 -15.58425 -15.19838 -15.14707 -15.03978 -14.71497 -14.55036 -14.38233 -14.20018 -13.81774 -13.72716 -13.47141 -13.31170 -13.09967 -13.05830 -12.60357 -12.54500 -12.43433 -12.27970 -12.13351 -11.89217 -11.70760 -11.69620 -11.46358 -11.33390 -10.97653 -10.87389 -10.54998 -10.15782 -10.08354 -9.98157 -9.58244 -9.21850 -4.97435 -0.02306 0.23150 0.24779 0.41921 0.58368 1.26977 1.40983 1.50215 1.52320 1.91667 2.46496 2.55367 2.69806 3.10113 3.38260 3.43682 3.47481 3.56171 3.61453 3.70427 3.71192 3.84877 3.86003 3.89157 3.96493 4.05049 4.12753 4.24225 4.31180 4.34874 4.37001 4.38337 4.53129 4.58254 4.64817 4.66823 4.79939 4.83019 4.85859 4.95202 4.97657 4.99506 5.12316 5.14274 5.28157 5.28686 5.37387 5.52782 5.58828 5.73004 5.76216 6.27707 6.46339 6.51097 6.91411 7.15174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.083 4.083 3 Si 0.782 3.218 4 C -0.165 4.165 5 C 0.129 3.871 6 O -0.311 6.311 7 C 0.038 3.962 8 C 0.517 3.483 9 O -0.554 6.554 10 N -0.682 5.682 11 C 0.192 3.808 12 C -0.063 4.063 13 C -0.110 4.110 14 C -0.094 4.094 15 C -0.107 4.107 16 Br -0.057 7.057 17 C -0.100 4.100 18 C -0.108 4.108 19 C -0.143 4.143 20 C 0.088 3.912 21 H 0.093 0.907 22 O -0.565 6.565 23 C -0.142 4.142 24 C -0.212 4.212 25 C -0.074 4.074 26 C -0.154 4.154 27 C -0.088 4.088 28 H 0.381 0.619 29 H 0.094 0.906 30 H -0.308 1.308 31 H -0.263 1.263 32 H 0.122 0.878 33 H 0.114 0.886 34 H 0.420 0.580 35 H 0.156 0.844 36 H 0.146 0.854 37 H 0.136 0.864 38 H 0.130 0.870 39 H 0.050 0.950 40 H 0.115 0.885 41 H 0.399 0.601 42 H 0.121 0.879 43 H 0.103 0.897 44 H 0.153 0.847 45 H 0.154 0.846 46 H 0.151 0.849 47 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.913 -7.296 7.987 10.986 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.190 4.190 3 Si 0.686 3.314 4 C -0.166 4.166 5 C 0.084 3.916 6 O -0.224 6.224 7 C -0.040 4.040 8 C 0.303 3.697 9 O -0.430 6.430 10 N -0.336 5.336 11 C 0.104 3.896 12 C -0.065 4.065 13 C -0.129 4.129 14 C -0.114 4.114 15 C -0.186 4.186 16 Br 0.029 6.971 17 C -0.119 4.119 18 C -0.127 4.127 19 C -0.181 4.181 20 C 0.028 3.972 21 H 0.111 0.889 22 O -0.373 6.373 23 C -0.180 4.180 24 C -0.231 4.231 25 C -0.092 4.092 26 C -0.172 4.172 27 C -0.106 4.106 28 H 0.229 0.771 29 H 0.112 0.888 30 H -0.237 1.237 31 H -0.189 1.189 32 H 0.140 0.860 33 H 0.132 0.868 34 H 0.259 0.741 35 H 0.173 0.827 36 H 0.164 0.836 37 H 0.154 0.846 38 H 0.148 0.852 39 H 0.069 0.931 40 H 0.133 0.867 41 H 0.249 0.751 42 H 0.139 0.861 43 H 0.121 0.879 44 H 0.170 0.830 45 H 0.172 0.828 46 H 0.169 0.831 47 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.025 -5.621 5.803 8.329 hybrid contribution -1.280 -0.820 1.000 1.820 sum 0.746 -6.442 6.803 9.399 Atomic orbital electron populations 1.86655 1.19020 1.80361 1.49640 1.25215 0.83231 1.12463 0.98103 0.94063 0.89847 0.70847 0.76648 1.19706 1.06805 0.91430 0.98617 1.19082 0.94053 0.91123 0.87376 1.86190 1.77975 1.18576 1.39663 1.22661 1.04218 0.80005 0.97135 1.20379 0.78497 0.82837 0.88025 1.90788 1.49381 1.62306 1.40527 1.45138 1.59193 1.05359 1.23932 1.20013 0.89970 0.96473 0.83104 1.20177 0.94021 0.97173 0.95114 1.21198 1.01051 1.00025 0.90620 1.21325 0.91729 0.98122 1.00234 1.21961 0.95844 1.08516 0.92271 1.96743 1.70488 1.97684 1.32220 1.21254 1.00904 0.98711 0.91071 1.21039 0.93969 0.99388 0.98259 1.23594 0.94293 0.99153 1.01042 1.22667 0.97503 0.94798 0.82197 0.88902 1.86473 1.91582 1.42971 1.16284 1.24001 0.96370 0.93155 1.04483 1.21581 1.05670 1.01743 0.94080 1.21398 0.95421 0.94203 0.98157 1.21402 1.02020 0.95082 0.98681 1.21188 0.96469 1.00500 0.92406 0.77053 0.88794 1.23673 1.18869 0.86046 0.86846 0.74124 0.82678 0.83607 0.84586 0.85174 0.93085 0.86673 0.75053 0.86067 0.87896 0.82990 0.82824 0.83124 0.83633 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -6.60 12.88 -148.98 -1.92 -8.52 16 2 C -0.08 -0.66 2.38 71.24 0.17 -0.49 16 3 Si 0.78 1.95 30.25 68.60 2.07 4.03 16 4 C -0.16 -0.90 5.27 -19.77 -0.10 -1.00 16 5 C 0.13 0.75 6.66 22.51 0.15 0.90 16 6 O -0.31 -2.94 9.00 -73.41 -0.66 -3.60 16 7 C 0.04 0.02 5.22 71.24 0.37 0.39 16 8 C 0.52 2.74 6.58 87.66 0.58 3.31 16 9 O -0.55 -9.18 14.96 16.02 0.24 -8.94 16 10 N -0.68 1.52 3.64 -423.93 -1.54 -0.02 16 11 C 0.19 -0.25 0.94 3.38 0.00 -0.25 16 12 C -0.06 -0.13 4.86 -19.86 -0.10 -0.23 16 13 C -0.11 -0.10 8.70 22.27 0.19 0.09 16 14 C -0.09 -0.29 9.79 22.29 0.22 -0.07 16 15 C -0.11 -0.59 6.22 22.31 0.14 -0.45 16 16 Br -0.06 -0.31 33.70 -20.37 -0.69 -1.00 16 17 C -0.10 -0.51 9.79 22.29 0.22 -0.29 16 18 C -0.11 -0.41 9.05 22.27 0.20 -0.21 16 19 C -0.14 -0.20 6.55 31.12 0.20 0.01 16 20 C 0.09 -0.47 5.28 31.12 0.16 -0.31 16 21 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 22 O -0.56 2.37 13.09 -148.98 -1.95 0.42 16 23 C -0.14 1.16 7.13 31.12 0.22 1.39 16 24 C -0.21 0.12 9.04 22.37 0.20 0.33 16 25 C -0.07 0.21 10.04 22.25 0.22 0.43 16 26 C -0.15 0.33 10.04 22.28 0.22 0.55 16 27 C -0.09 -0.06 8.66 22.25 0.19 0.13 16 28 H 0.38 1.70 8.70 -74.05 -0.64 1.06 16 29 H 0.09 1.08 7.83 -2.39 -0.02 1.07 16 30 H -0.31 -3.33 7.11 99.48 0.71 -2.63 16 31 H -0.26 -0.74 6.69 99.48 0.67 -0.08 16 32 H 0.12 -0.80 7.66 -2.39 -0.02 -0.82 16 33 H 0.11 -0.46 7.66 -2.38 -0.02 -0.48 16 34 H 0.42 -3.87 8.72 -92.71 -0.81 -4.68 16 35 H 0.16 -0.70 6.55 -2.91 -0.02 -0.72 16 36 H 0.15 -0.01 8.06 -2.91 -0.02 -0.04 16 37 H 0.14 0.42 8.06 -2.91 -0.02 0.40 16 38 H 0.13 0.19 6.86 -2.91 -0.02 0.17 16 39 H 0.05 0.53 6.94 -2.38 -0.02 0.51 16 40 H 0.12 -0.15 6.23 -2.39 -0.01 -0.16 16 41 H 0.40 -5.15 9.12 -74.05 -0.68 -5.82 16 42 H 0.12 -1.25 7.78 -2.39 -0.02 -1.27 16 43 H 0.10 -1.17 8.11 -2.39 -0.02 -1.19 16 44 H 0.15 -0.98 6.30 -2.91 -0.02 -1.00 16 45 H 0.15 -1.27 8.06 -2.91 -0.02 -1.30 16 46 H 0.15 -1.04 8.06 -2.91 -0.02 -1.06 16 47 H 0.15 -0.37 4.86 -2.91 -0.01 -0.39 16 Total: 0.00 -30.62 407.21 -2.04 -32.65 By element: Atomic # 1 Polarization: -18.18 SS G_CDS: -1.07 Total: -19.24 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: 3.47 Total: 4.23 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -1.54 Total: -0.02 kcal Atomic # 8 Polarization: -16.36 SS G_CDS: -4.29 Total: -20.65 kcal Atomic # 14 Polarization: 1.95 SS G_CDS: 2.07 Total: 4.03 kcal Atomic # 35 Polarization: -0.31 SS G_CDS: -0.69 Total: -1.00 kcal Total: -30.62 -2.04 -32.65 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_2989392.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.553 kcal (2) G-P(sol) polarization free energy of solvation -30.616 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.037 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.653 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds