Wall clock time and date at job start Sat Mar 6 2021 23:45:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86296 * 109.46803 * 2 1 4 4 C 1.50698 * 109.46882 * 240.00521 * 2 1 3 5 5 C 1.38266 * 119.94745 * 119.72602 * 4 2 1 6 6 C 1.38148 * 120.05711 * 179.72648 * 5 4 2 7 7 C 1.38732 * 119.94258 * 0.53788 * 6 5 4 8 8 O 1.35899 * 120.05417 * 179.74686 * 7 6 5 9 9 C 1.42897 * 116.99847 * 359.97438 * 8 7 6 10 10 C 1.50706 * 109.46946 * 179.97438 * 9 8 7 11 11 O 1.21272 * 120.00172 * 359.97438 * 10 9 8 12 12 N 1.34775 * 119.99887 * 179.97438 * 10 9 8 13 13 C 1.46505 * 120.00254 * 174.77905 * 12 10 9 14 14 C 1.50700 * 112.84944 * 291.82313 * 13 12 10 15 15 C 1.38241 * 119.99037 * 165.25584 * 14 13 12 16 16 C 1.38216 * 120.01225 * 179.76552 * 15 14 13 17 17 C 1.38324 * 119.98622 * 0.51318 * 16 15 14 18 18 Br 1.89108 * 120.00983 * 179.76406 * 17 16 15 19 19 C 1.38328 * 119.98078 * 359.74595 * 17 16 15 20 20 C 1.38215 * 119.99161 * 359.97438 * 19 17 16 21 21 C 1.53776 * 113.61632 * 160.51136 * 13 12 10 22 22 C 1.53778 * 87.08269 * 270.88584 * 21 13 12 23 23 H 1.08997 * 113.69353 * 220.00502 * 22 21 13 24 24 O 1.42902 * 113.61193 * 89.11667 * 22 21 13 25 25 C 1.53780 * 87.08360 * 334.57033 * 22 21 13 26 26 C 1.38732 * 119.88861 * 359.74005 * 7 6 5 27 27 C 1.38145 * 119.94445 * 359.97438 * 26 7 6 28 28 H 0.96703 * 113.99664 * 299.99080 * 1 2 3 29 29 H 1.08999 * 109.47445 * 120.00561 * 2 1 3 30 30 H 1.48498 * 110.00506 * 300.00099 * 3 2 1 31 31 H 1.48502 * 110.00010 * 61.32344 * 3 2 1 32 32 H 1.08005 * 119.97046 * 359.97296 * 5 4 2 33 33 H 1.07998 * 120.02502 * 180.27628 * 6 5 4 34 34 H 1.09000 * 109.47117 * 299.99461 * 9 8 7 35 35 H 1.09003 * 109.47755 * 59.99344 * 9 8 7 36 36 H 0.97005 * 120.00419 * 354.78635 * 12 10 9 37 37 H 1.08008 * 119.99416 * 0.02760 * 15 14 13 38 38 H 1.07991 * 120.00817 * 180.27999 * 16 15 14 39 39 H 1.08004 * 120.00585 * 180.02562 * 19 17 16 40 40 H 1.07998 * 119.99601 * 179.97438 * 20 19 17 41 41 H 1.08997 * 113.61002 * 25.43980 * 21 13 12 42 42 H 1.08999 * 113.60852 * 156.33589 * 21 13 12 43 43 H 0.96700 * 114.00070 * 82.49944 * 24 22 21 44 44 H 1.09003 * 113.61184 * 270.88171 * 25 22 21 45 45 H 1.08997 * 113.69358 * 139.99146 * 25 22 21 46 46 H 1.08000 * 120.02581 * 180.02562 * 26 7 6 47 47 H 1.07999 * 119.96956 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7215 -0.0356 -2.1428 6 6 3.1878 -0.6861 -3.2687 7 6 2.8535 -2.0144 -3.4894 8 8 3.3067 -2.6550 -4.5989 9 6 4.1229 -1.8996 -5.4963 10 6 4.5287 -2.7687 -6.6587 11 8 4.1561 -3.9215 -6.7130 12 7 5.3057 -2.2648 -7.6378 13 6 5.7946 -3.1382 -8.7076 14 6 6.7970 -4.1533 -8.2221 15 6 7.1253 -5.2353 -9.0174 16 6 8.0482 -6.1641 -8.5746 17 6 8.6354 -6.0164 -7.3310 18 35 9.8932 -7.2904 -6.7217 19 6 8.3026 -4.9365 -6.5332 20 6 7.3840 -4.0051 -6.9793 21 6 6.2452 -2.3778 -9.9661 22 6 4.7939 -2.4951 -10.4609 23 1 4.7104 -2.7097 -11.5263 24 8 3.9584 -1.4127 -10.0458 25 6 4.6738 -3.7427 -9.5698 26 6 2.0558 -2.6875 -2.5755 27 6 1.5969 -2.0342 -1.4481 28 1 -0.3933 0.4416 0.7652 29 1 1.7925 -0.5139 0.8899 30 1 1.5615 2.4680 -1.2084 31 1 1.5879 2.4585 1.2243 32 1 2.9776 0.9998 -1.9729 33 1 3.8086 -0.1599 -3.9787 34 1 3.5608 -1.0408 -5.8631 35 1 5.0143 -1.5537 -4.9730 36 1 5.5413 -1.3238 -7.6343 37 1 6.6637 -5.3527 -9.9868 38 1 8.3080 -7.0069 -9.1979 39 1 8.7612 -4.8206 -5.5623 40 1 7.1238 -3.1622 -6.3564 41 1 6.5576 -1.3525 -9.7682 42 1 6.9605 -2.9290 -10.5764 43 1 4.0295 -0.6251 -10.6023 44 1 4.9596 -4.6670 -10.0720 45 1 3.7181 -3.8205 -9.0517 46 1 1.7945 -3.7216 -2.7449 47 1 0.9762 -2.5579 -0.7362 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_2989410.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:22 Heat of formation + Delta-G solvation = -45.755395 kcal Electronic energy + Delta-G solvation = -33233.799320 eV Core-core repulsion = 28589.535838 eV Total energy + Delta-G solvation = -4644.263482 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.061 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.24016 -41.32931 -39.99833 -39.43098 -38.77876 -37.32150 -36.26106 -34.25183 -33.17247 -32.44768 -32.01015 -31.81731 -30.41192 -29.51250 -26.97547 -26.26636 -25.46201 -24.09570 -23.82287 -22.64859 -22.21866 -21.63419 -20.34954 -19.44635 -18.71962 -18.59952 -18.41587 -17.72261 -17.36947 -17.15684 -16.90491 -16.75899 -16.40178 -16.04808 -15.72175 -15.66585 -15.55651 -15.21020 -15.18076 -14.74836 -14.57231 -14.47106 -14.36652 -14.10298 -13.97831 -13.78531 -13.53128 -13.42926 -13.29605 -13.04922 -12.58572 -12.49730 -12.41165 -12.25866 -12.18701 -11.91407 -11.76037 -11.69563 -11.43874 -11.31656 -10.94470 -10.85149 -10.48286 -10.13262 -10.06734 -10.04974 -9.56695 -9.22639 -4.91935 -0.00949 0.25835 0.26453 0.29820 0.60258 1.32259 1.43795 1.48046 1.61918 1.96473 2.48085 2.54748 2.61054 3.13205 3.39510 3.43164 3.47369 3.57816 3.65282 3.73055 3.76146 3.81898 3.87766 3.90551 3.96571 4.02700 4.08271 4.26084 4.28614 4.36564 4.40725 4.41342 4.44477 4.60092 4.67214 4.68284 4.83142 4.85387 4.88545 4.95490 4.98948 5.03101 5.14129 5.14921 5.16435 5.23493 5.30011 5.49202 5.60497 5.68159 5.74661 6.25430 6.47489 6.60106 6.93853 7.16434 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.086 4.086 3 Si 0.769 3.231 4 C -0.124 4.124 5 C -0.077 4.077 6 C -0.199 4.199 7 C 0.121 3.879 8 O -0.317 6.317 9 C 0.035 3.965 10 C 0.516 3.484 11 O -0.556 6.556 12 N -0.683 5.683 13 C 0.192 3.808 14 C -0.064 4.064 15 C -0.109 4.109 16 C -0.094 4.094 17 C -0.107 4.107 18 Br -0.058 7.058 19 C -0.099 4.099 20 C -0.109 4.109 21 C -0.143 4.143 22 C 0.086 3.914 23 H 0.092 0.908 24 O -0.565 6.565 25 C -0.143 4.143 26 C -0.167 4.167 27 C -0.061 4.061 28 H 0.394 0.606 29 H 0.092 0.908 30 H -0.295 1.295 31 H -0.289 1.289 32 H 0.152 0.848 33 H 0.166 0.834 34 H 0.119 0.881 35 H 0.128 0.872 36 H 0.422 0.578 37 H 0.156 0.844 38 H 0.146 0.854 39 H 0.137 0.863 40 H 0.133 0.867 41 H 0.103 0.897 42 H 0.121 0.879 43 H 0.399 0.601 44 H 0.115 0.885 45 H 0.053 0.947 46 H 0.127 0.873 47 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.106 8.138 -3.115 10.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.194 4.194 3 Si 0.674 3.326 4 C -0.124 4.124 5 C -0.095 4.095 6 C -0.218 4.218 7 C 0.076 3.924 8 O -0.231 6.231 9 C -0.043 4.043 10 C 0.302 3.698 11 O -0.432 6.432 12 N -0.337 5.337 13 C 0.104 3.896 14 C -0.065 4.065 15 C -0.128 4.128 16 C -0.114 4.114 17 C -0.186 4.186 18 Br 0.028 6.972 19 C -0.118 4.118 20 C -0.128 4.128 21 C -0.180 4.180 22 C 0.027 3.973 23 H 0.110 0.890 24 O -0.373 6.373 25 C -0.181 4.181 26 C -0.186 4.186 27 C -0.079 4.079 28 H 0.244 0.756 29 H 0.110 0.890 30 H -0.223 1.223 31 H -0.216 1.216 32 H 0.169 0.831 33 H 0.183 0.817 34 H 0.137 0.863 35 H 0.145 0.855 36 H 0.260 0.740 37 H 0.173 0.827 38 H 0.163 0.837 39 H 0.155 0.845 40 H 0.151 0.849 41 H 0.121 0.879 42 H 0.139 0.861 43 H 0.249 0.751 44 H 0.133 0.867 45 H 0.072 0.928 46 H 0.145 0.855 47 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 5.006 6.736 -3.056 8.932 hybrid contribution -1.403 0.530 0.304 1.530 sum 3.604 7.266 -2.751 8.565 Atomic orbital electron populations 1.86554 1.18823 1.80719 1.50968 1.25043 0.83864 1.12108 0.98384 0.94217 0.90162 0.71762 0.76458 1.19458 1.01068 0.94529 0.97382 1.21022 0.95917 0.99936 0.92577 1.21470 1.05939 0.93268 1.01091 1.19191 0.94702 0.91984 0.86560 1.86129 1.65140 1.40156 1.31639 1.22741 0.97647 0.94302 0.89565 1.20406 0.78083 0.87689 0.83578 1.90769 1.54251 1.20084 1.78132 1.45158 1.51224 1.13307 1.23976 1.19997 0.92506 0.90307 0.86755 1.20157 0.96015 0.95836 0.94526 1.21201 0.97327 0.93093 1.01199 1.21320 0.95892 0.99972 0.94212 1.21973 1.00942 0.97253 0.98436 1.96748 1.55854 1.55391 1.89226 1.21260 0.97698 0.93118 0.99771 1.21069 0.96225 0.99444 0.96098 1.23998 0.98242 1.02463 0.93343 1.22680 0.89362 0.87454 0.97797 0.89012 1.86475 1.65601 1.26506 1.58756 1.23613 0.98769 0.98359 0.97404 1.20613 1.01559 1.01330 0.95082 1.20916 0.96881 0.94181 0.95971 0.75588 0.89002 1.22258 1.21646 0.83073 0.81701 0.86306 0.85487 0.73982 0.82697 0.83668 0.84509 0.84870 0.87899 0.86128 0.75072 0.86707 0.92777 0.85518 0.84796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.76 12.74 -148.98 -1.90 -3.66 16 2 C -0.09 0.00 2.81 71.24 0.20 0.20 16 3 Si 0.77 -2.08 29.78 68.60 2.04 -0.03 16 4 C -0.12 -0.39 5.42 -19.85 -0.11 -0.50 16 5 C -0.08 -0.01 8.66 22.26 0.19 0.19 16 6 C -0.20 0.06 9.04 22.37 0.20 0.26 16 7 C 0.12 0.67 6.69 22.51 0.15 0.82 16 8 O -0.32 -2.41 9.67 -73.38 -0.71 -3.12 16 9 C 0.04 -0.06 5.22 71.24 0.37 0.31 16 10 C 0.52 1.76 6.43 87.66 0.56 2.32 16 11 O -0.56 -8.02 14.94 16.03 0.24 -7.78 16 12 N -0.68 2.49 3.76 -423.92 -1.59 0.90 16 13 C 0.19 -0.49 0.94 3.38 0.00 -0.49 16 14 C -0.06 -0.05 4.85 -19.86 -0.10 -0.15 16 15 C -0.11 0.01 8.79 22.27 0.20 0.21 16 16 C -0.09 -0.19 9.79 22.29 0.22 0.02 16 17 C -0.11 -0.48 6.22 22.31 0.14 -0.34 16 18 Br -0.06 -0.27 33.70 -20.37 -0.69 -0.96 16 19 C -0.10 -0.37 9.79 22.29 0.22 -0.16 16 20 C -0.11 -0.25 8.97 22.27 0.20 -0.05 16 21 C -0.14 1.29 7.13 31.12 0.22 1.51 16 22 C 0.09 -0.54 5.28 31.12 0.16 -0.37 16 23 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 24 O -0.56 2.77 13.09 -148.98 -1.95 0.82 16 25 C -0.14 -0.01 6.56 31.12 0.20 0.19 16 26 C -0.17 -1.21 9.99 22.37 0.22 -0.99 16 27 C -0.06 -0.34 9.60 22.25 0.21 -0.12 16 28 H 0.39 -1.96 8.74 -74.06 -0.65 -2.61 16 29 H 0.09 -0.33 7.96 -2.39 -0.02 -0.35 16 30 H -0.30 -1.16 7.11 99.48 0.71 -0.46 16 31 H -0.29 -0.51 7.11 99.48 0.71 0.19 16 32 H 0.15 -0.77 4.87 -2.91 -0.01 -0.78 16 33 H 0.17 -1.31 6.30 -2.91 -0.02 -1.33 16 34 H 0.12 -0.82 7.66 -2.39 -0.02 -0.84 16 35 H 0.13 -1.13 7.66 -2.39 -0.02 -1.15 16 36 H 0.42 -4.45 8.68 -92.70 -0.80 -5.25 16 37 H 0.16 -0.84 6.45 -2.91 -0.02 -0.85 16 38 H 0.15 -0.13 8.06 -2.92 -0.02 -0.16 16 39 H 0.14 0.24 8.06 -2.91 -0.02 0.21 16 40 H 0.13 -0.09 6.78 -2.91 -0.02 -0.11 16 41 H 0.10 -1.25 8.10 -2.39 -0.02 -1.27 16 42 H 0.12 -1.33 7.84 -2.39 -0.02 -1.35 16 43 H 0.40 -5.37 9.12 -74.06 -0.68 -6.05 16 44 H 0.11 -0.30 6.14 -2.39 -0.01 -0.31 16 45 H 0.05 0.47 6.99 -2.39 -0.02 0.45 16 46 H 0.13 0.95 8.06 -2.91 -0.02 0.93 16 47 H 0.13 0.52 8.06 -2.91 -0.02 0.49 16 Total: 0.00 -30.29 407.76 -2.10 -32.39 By element: Atomic # 1 Polarization: -20.43 SS G_CDS: -1.02 Total: -21.45 kcal Atomic # 6 Polarization: -0.59 SS G_CDS: 3.48 Total: 2.89 kcal Atomic # 7 Polarization: 2.49 SS G_CDS: -1.59 Total: 0.90 kcal Atomic # 8 Polarization: -9.41 SS G_CDS: -4.32 Total: -13.73 kcal Atomic # 14 Polarization: -2.08 SS G_CDS: 2.04 Total: -0.03 kcal Atomic # 35 Polarization: -0.27 SS G_CDS: -0.69 Total: -0.96 kcal Total: -30.29 -2.10 -32.39 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_2989410.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.368 kcal (2) G-P(sol) polarization free energy of solvation -30.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.658 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.388 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.755 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds