Wall clock time and date at job start Sat Mar 6 2021 23:45:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.47207 * 2 1 4 4 C 1.50701 * 109.47106 * 120.00375 * 2 1 3 5 5 C 1.38261 * 119.94434 * 64.99890 * 4 2 1 6 6 C 1.38147 * 120.05315 * 180.02562 * 5 4 2 7 7 C 1.38739 * 119.94359 * 359.97438 * 6 5 4 8 8 O 1.35896 * 120.05478 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00223 * 179.97438 * 8 7 6 10 10 C 1.52998 * 109.47269 * 179.97438 * 9 8 7 11 11 C 1.50703 * 109.47076 * 179.97438 * 10 9 8 12 12 O 1.21281 * 119.99518 * 0.02562 * 11 10 9 13 13 N 1.34774 * 119.99810 * 180.02562 * 11 10 9 14 14 C 1.46500 * 119.99704 * 184.85035 * 13 11 10 15 15 C 1.50696 * 112.85019 * 305.21294 * 14 13 11 16 16 C 1.38244 * 119.99237 * 334.39273 * 15 14 13 17 17 C 1.38213 * 120.01349 * 179.76467 * 16 15 14 18 18 C 1.38324 * 119.99003 * 0.51461 * 17 16 15 19 19 Br 1.89101 * 120.01302 * 179.76515 * 18 17 16 20 20 C 1.38326 * 119.97949 * 359.74203 * 18 17 16 21 21 C 1.38221 * 119.98921 * 359.97438 * 20 18 17 22 22 C 1.53780 * 113.61351 * 174.01572 * 14 13 11 23 23 C 1.53784 * 87.08121 * 270.79794 * 22 14 13 24 24 H 1.08996 * 113.61292 * 220.01963 * 23 22 14 25 25 O 1.42901 * 113.61286 * 89.20339 * 23 22 14 26 26 C 1.53783 * 87.08066 * 334.56552 * 23 22 14 27 27 C 1.38726 * 119.88713 * 0.27629 * 7 6 5 28 28 C 1.38148 * 119.94594 * 359.43140 * 27 7 6 29 29 H 0.96699 * 114.00400 * 59.99870 * 1 2 3 30 30 H 1.09002 * 109.46943 * 240.00257 * 2 1 3 31 31 H 1.48506 * 109.99821 * 298.68277 * 3 2 1 32 32 H 1.48499 * 110.00015 * 60.00233 * 3 2 1 33 33 H 1.07993 * 119.97667 * 359.97300 * 5 4 2 34 34 H 1.08001 * 120.03096 * 179.97438 * 6 5 4 35 35 H 1.09000 * 109.46737 * 59.99625 * 9 8 7 36 36 H 1.09002 * 109.46847 * 299.99837 * 9 8 7 37 37 H 1.09001 * 109.46757 * 60.00159 * 10 9 8 38 38 H 1.09002 * 109.47335 * 299.99883 * 10 9 8 39 39 H 0.96999 * 120.00276 * 4.84368 * 13 11 10 40 40 H 1.08000 * 119.98891 * 0.02562 * 16 15 14 41 41 H 1.08000 * 120.00779 * 180.23107 * 17 16 15 42 42 H 1.07996 * 120.00581 * 180.02562 * 20 18 17 43 43 H 1.07995 * 119.99234 * 179.97438 * 21 20 18 44 44 H 1.09004 * 113.61308 * 156.25259 * 22 14 13 45 45 H 1.08997 * 113.61573 * 25.34877 * 22 14 13 46 46 H 0.96700 * 114.00132 * 181.53132 * 25 23 22 47 47 H 1.09003 * 113.60815 * 139.98012 * 26 23 22 48 48 H 1.08994 * 113.61464 * 270.88349 * 26 23 22 49 49 H 1.08005 * 120.02715 * 179.71862 * 27 7 6 50 50 H 1.08001 * 119.97050 * 180.32043 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6840 -2.0605 1.3971 6 6 2.1430 -2.7140 2.5244 7 6 2.8531 -2.0144 3.4894 8 8 3.3061 -2.6551 4.5990 9 6 4.0302 -1.8721 5.5501 10 6 4.4553 -2.7584 6.7225 11 6 5.2194 -1.9327 7.7252 12 8 5.4052 -0.7515 7.5222 13 7 5.6963 -2.5070 8.8474 14 6 6.3458 -1.6851 9.8716 15 6 7.4851 -0.8631 9.3266 16 6 8.1603 -1.2822 8.1953 17 6 9.2022 -0.5261 7.6922 18 6 9.5763 0.6446 8.3269 19 35 11.0061 1.6761 7.6430 20 6 8.9040 1.0608 9.4619 21 6 7.8584 0.3071 9.9609 22 6 6.7030 -2.4622 11.1497 23 6 5.3031 -2.0951 11.6699 24 1 5.2856 -1.8315 12.7273 25 8 4.2945 -3.0442 11.3178 26 6 5.3601 -0.8774 10.7324 27 6 3.0954 -0.6588 3.3222 28 6 2.6395 -0.0112 2.1903 29 1 -0.3934 0.4417 -0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5878 2.4585 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 1.1308 -2.6045 0.6459 34 1 1.9492 -3.7685 2.6544 35 1 3.3944 -1.0660 5.9163 36 1 4.9150 -1.4493 5.0743 37 1 5.0909 -3.5647 6.3565 38 1 3.5702 -3.1809 7.1982 39 1 5.6094 -3.4643 8.9770 40 1 7.8707 -2.1983 7.7021 41 1 9.7271 -0.8516 6.8063 42 1 9.1955 1.9749 9.9576 43 1 7.3337 0.6317 10.8473 44 1 7.5136 -2.0116 11.7224 45 1 6.8418 -3.5309 10.9865 46 1 3.4078 -2.8070 11.6221 47 1 4.4147 -0.6668 10.2324 48 1 5.8036 0.0063 11.1910 49 1 3.6440 -0.1110 4.0742 50 1 2.8324 1.0431 2.0572 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_4549602.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:28 Heat of formation + Delta-G solvation = -51.595901 kcal Electronic energy + Delta-G solvation = -35114.718900 eV Core-core repulsion = 30314.664535 eV Total energy + Delta-G solvation = -4800.054365 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -42.18928 -41.29361 -40.00612 -39.43507 -39.03448 -37.38485 -36.24098 -34.20323 -33.24182 -33.10582 -32.09589 -31.94458 -31.48423 -30.28240 -27.04709 -26.78195 -25.95729 -25.02840 -23.84883 -23.50067 -22.50359 -22.07281 -21.39291 -20.30018 -19.54110 -18.62829 -18.55849 -17.91896 -17.80999 -17.43886 -17.31932 -16.96282 -16.78497 -16.29720 -16.12906 -15.88847 -15.70116 -15.60527 -15.39844 -15.16625 -14.78316 -14.64999 -14.50621 -14.42805 -14.25885 -14.11633 -13.92611 -13.73100 -13.59977 -13.45580 -13.12269 -12.93737 -12.81126 -12.54838 -12.44440 -12.27095 -12.24019 -12.02851 -11.75498 -11.70551 -11.64851 -11.51713 -11.30350 -11.01644 -10.76245 -10.49073 -10.10672 -10.05680 -10.01926 -9.50782 -9.23074 -4.95750 0.03600 0.25471 0.28923 0.30404 0.62331 1.28294 1.55298 1.55657 1.67828 1.91057 2.41870 2.54539 2.59711 3.10955 3.40888 3.46566 3.53160 3.55312 3.62112 3.74126 3.78411 3.81532 3.84267 3.88895 3.89906 3.94043 4.05366 4.23605 4.26270 4.30861 4.37945 4.41172 4.42399 4.48243 4.61304 4.65122 4.67517 4.70102 4.76592 4.79871 4.86258 4.90300 4.94983 4.96890 5.02976 5.16401 5.16726 5.19444 5.26114 5.34845 5.48412 5.64621 5.69358 5.78457 6.30166 6.48981 6.59461 6.85690 7.20462 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.076 4.076 3 Si 0.753 3.247 4 C -0.124 4.124 5 C -0.059 4.059 6 C -0.158 4.158 7 C 0.124 3.876 8 O -0.320 6.320 9 C 0.076 3.924 10 C -0.133 4.133 11 C 0.521 3.479 12 O -0.562 6.562 13 N -0.689 5.689 14 C 0.188 3.812 15 C -0.052 4.052 16 C -0.102 4.102 17 C -0.100 4.100 18 C -0.106 4.106 19 Br -0.059 7.059 20 C -0.096 4.096 21 C -0.112 4.112 22 C -0.119 4.119 23 C 0.088 3.912 24 H 0.092 0.908 25 O -0.562 6.562 26 C -0.173 4.173 27 C -0.210 4.210 28 C -0.084 4.084 29 H 0.394 0.606 30 H 0.098 0.902 31 H -0.283 1.283 32 H -0.302 1.302 33 H 0.144 0.856 34 H 0.145 0.855 35 H 0.061 0.939 36 H 0.067 0.933 37 H 0.124 0.876 38 H 0.122 0.878 39 H 0.419 0.581 40 H 0.128 0.872 41 H 0.134 0.866 42 H 0.143 0.857 43 H 0.154 0.846 44 H 0.124 0.876 45 H 0.091 0.909 46 H 0.397 0.603 47 H 0.063 0.937 48 H 0.112 0.888 49 H 0.139 0.861 50 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.540 -3.928 3.583 5.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.185 4.185 3 Si 0.659 3.341 4 C -0.124 4.124 5 C -0.077 4.077 6 C -0.176 4.176 7 C 0.078 3.922 8 O -0.234 6.234 9 C 0.001 3.999 10 C -0.172 4.172 11 C 0.308 3.692 12 O -0.440 6.440 13 N -0.341 5.341 14 C 0.101 3.899 15 C -0.053 4.053 16 C -0.121 4.121 17 C -0.119 4.119 18 C -0.186 4.186 19 Br 0.026 6.974 20 C -0.115 4.115 21 C -0.131 4.131 22 C -0.157 4.157 23 C 0.028 3.972 24 H 0.110 0.890 25 O -0.370 6.370 26 C -0.212 4.212 27 C -0.228 4.228 28 C -0.101 4.101 29 H 0.245 0.755 30 H 0.116 0.884 31 H -0.210 1.210 32 H -0.230 1.230 33 H 0.162 0.838 34 H 0.163 0.837 35 H 0.080 0.920 36 H 0.085 0.915 37 H 0.143 0.857 38 H 0.140 0.860 39 H 0.257 0.743 40 H 0.146 0.854 41 H 0.152 0.848 42 H 0.161 0.839 43 H 0.172 0.828 44 H 0.142 0.858 45 H 0.109 0.891 46 H 0.247 0.753 47 H 0.082 0.918 48 H 0.130 0.870 49 H 0.156 0.844 50 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 1.566 -2.707 3.522 4.710 hybrid contribution -1.880 0.053 -0.269 1.900 sum -0.314 -2.654 3.253 4.210 Atomic orbital electron populations 1.86549 1.18612 1.80586 1.51075 1.24860 0.83924 1.11240 0.98518 0.94225 0.90667 0.72893 0.76336 1.19394 1.01543 0.94642 0.96817 1.21013 0.96366 0.93670 0.96673 1.20690 1.01689 1.01493 0.93749 1.19157 0.94636 0.91204 0.87157 1.85956 1.69252 1.38777 1.29414 1.22418 0.95706 0.93489 0.88336 1.21425 1.02890 0.99237 0.93685 1.20505 0.78609 0.87779 0.82305 1.90778 1.58496 1.17631 1.77101 1.45457 1.58838 1.11950 1.17891 1.20026 0.90493 0.92157 0.87216 1.19974 0.95284 0.95114 0.94929 1.20966 0.95042 0.99963 0.96098 1.21206 0.97497 0.93426 0.99804 1.21927 0.98430 0.98060 1.00152 1.96736 1.43755 1.70421 1.86456 1.21293 0.95334 1.00431 0.94474 1.21233 0.96802 0.93831 1.01184 1.23463 0.97006 1.01958 0.93241 1.22668 0.88874 0.88041 0.97578 0.89041 1.86365 1.20928 1.47819 1.81890 1.24231 0.99694 0.99155 0.98108 1.21367 1.06671 0.94037 1.00747 1.20970 0.96651 0.99799 0.92722 0.75530 0.88442 1.20974 1.23044 0.83850 0.83687 0.92046 0.91480 0.85743 0.86027 0.74346 0.85432 0.84807 0.83884 0.82849 0.85790 0.89055 0.75267 0.91830 0.87038 0.84368 0.84471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.01 12.81 -148.98 -1.91 -3.92 16 2 C -0.08 -0.09 2.79 71.24 0.20 0.11 16 3 Si 0.75 0.23 29.84 68.60 2.05 2.28 16 4 C -0.12 -0.58 5.39 -19.85 -0.11 -0.69 16 5 C -0.06 -0.25 9.68 22.25 0.22 -0.03 16 6 C -0.16 -0.73 9.99 22.37 0.22 -0.51 16 7 C 0.12 0.75 6.69 22.51 0.15 0.90 16 8 O -0.32 -1.47 10.14 -92.38 -0.94 -2.40 16 9 C 0.08 0.13 4.03 71.98 0.29 0.42 16 10 C -0.13 0.46 6.07 29.85 0.18 0.64 16 11 C 0.52 0.15 6.67 87.66 0.58 0.73 16 12 O -0.56 -4.58 14.29 -3.03 -0.04 -4.62 16 13 N -0.69 2.61 4.05 -423.92 -1.72 0.89 16 14 C 0.19 -0.58 0.95 3.38 0.00 -0.57 16 15 C -0.05 -0.05 4.07 -19.86 -0.08 -0.13 16 16 C -0.10 -0.30 8.19 22.27 0.18 -0.11 16 17 C -0.10 -0.44 9.79 22.28 0.22 -0.23 16 18 C -0.11 -0.53 6.22 22.31 0.14 -0.39 16 19 Br -0.06 -0.30 33.70 -20.37 -0.69 -0.98 16 20 C -0.10 -0.25 9.79 22.29 0.22 -0.03 16 21 C -0.11 -0.03 9.24 22.27 0.21 0.17 16 22 C -0.12 0.83 7.16 31.12 0.22 1.05 16 23 C 0.09 -0.64 5.27 31.12 0.16 -0.48 16 24 H 0.09 -0.93 8.14 -2.39 -0.02 -0.95 16 25 O -0.56 3.53 13.09 -148.98 -1.95 1.58 16 26 C -0.17 0.71 6.98 31.12 0.22 0.93 16 27 C -0.21 -1.16 9.04 22.37 0.20 -0.96 16 28 C -0.08 -0.41 8.66 22.26 0.19 -0.21 16 29 H 0.39 -1.82 8.74 -74.06 -0.65 -2.46 16 30 H 0.10 -0.33 7.96 -2.39 -0.02 -0.35 16 31 H -0.28 -1.07 7.11 99.48 0.71 -0.36 16 32 H -0.30 -2.43 7.05 99.48 0.70 -1.73 16 33 H 0.14 0.15 8.06 -2.91 -0.02 0.12 16 34 H 0.15 0.21 8.06 -2.91 -0.02 0.19 16 35 H 0.06 0.23 7.61 -2.39 -0.02 0.21 16 36 H 0.07 0.19 7.63 -2.39 -0.02 0.18 16 37 H 0.12 -0.88 8.14 -2.39 -0.02 -0.90 16 38 H 0.12 -0.73 8.14 -2.39 -0.02 -0.75 16 39 H 0.42 -3.16 8.62 -92.71 -0.80 -3.96 16 40 H 0.13 0.11 7.08 -2.91 -0.02 0.09 16 41 H 0.13 0.35 8.06 -2.91 -0.02 0.33 16 42 H 0.14 -0.05 8.06 -2.91 -0.02 -0.07 16 43 H 0.15 -0.75 5.92 -2.91 -0.02 -0.77 16 44 H 0.12 -1.12 8.09 -2.38 -0.02 -1.14 16 45 H 0.09 -0.65 8.10 -2.39 -0.02 -0.67 16 46 H 0.40 -4.78 9.12 -74.06 -0.68 -5.46 16 47 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 48 H 0.11 -0.69 5.77 -2.39 -0.01 -0.70 16 49 H 0.14 0.52 6.30 -2.91 -0.02 0.51 16 50 H 0.14 0.26 4.86 -2.91 -0.01 0.25 16 Total: 0.00 -22.35 429.35 -2.63 -24.98 By element: Atomic # 1 Polarization: -17.35 SS G_CDS: -1.06 Total: -18.42 kcal Atomic # 6 Polarization: -3.01 SS G_CDS: 3.62 Total: 0.62 kcal Atomic # 7 Polarization: 2.61 SS G_CDS: -1.72 Total: 0.89 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -4.84 Total: -9.36 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: 2.05 Total: 2.28 kcal Atomic # 35 Polarization: -0.30 SS G_CDS: -0.69 Total: -0.98 kcal Total: -22.35 -2.63 -24.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_4549602.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.613 kcal (2) G-P(sol) polarization free energy of solvation -22.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.961 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.596 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds