Wall clock time and date at job start Sat Mar 6 2021 23:45:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86303 * 109.47047 * 2 1 4 4 C 1.50699 * 109.47176 * 240.00119 * 2 1 3 5 5 C 1.38245 * 119.97421 * 120.00210 * 4 2 1 6 6 C 1.38287 * 120.11156 * 180.02562 * 5 4 2 7 7 C 1.38125 * 120.05351 * 359.97438 * 6 5 4 8 8 C 1.38747 * 119.94898 * 0.02562 * 7 6 5 9 9 O 1.35896 * 120.06114 * 179.97438 * 8 7 6 10 10 C 1.42907 * 116.99779 * 359.97438 * 9 8 7 11 11 C 1.52999 * 109.47232 * 179.97438 * 10 9 8 12 12 C 1.50699 * 109.47168 * 179.97438 * 11 10 9 13 13 O 1.21285 * 119.99848 * 0.02562 * 12 11 10 14 14 N 1.34771 * 119.99880 * 180.02562 * 12 11 10 15 15 C 1.46499 * 120.00093 * 175.27340 * 14 12 11 16 16 C 1.50699 * 112.85331 * 72.61994 * 15 14 12 17 17 C 1.38245 * 119.99123 * 192.96684 * 16 15 14 18 18 C 1.38219 * 120.00393 * 179.77055 * 17 16 15 19 19 C 1.38323 * 119.99339 * 0.50846 * 18 17 16 20 20 Br 1.89104 * 120.01069 * 179.76426 * 19 18 17 21 21 C 1.38327 * 119.98086 * 359.75132 * 19 18 17 22 22 C 1.38212 * 119.98626 * 359.97438 * 21 19 18 23 23 C 1.53788 * 113.61097 * 301.42976 * 15 14 12 24 24 C 1.53788 * 87.07951 * 270.88282 * 23 15 14 25 25 H 1.08999 * 113.61039 * 220.02294 * 24 23 15 26 26 O 1.42898 * 113.61338 * 89.11624 * 24 23 15 27 27 C 1.53778 * 113.61814 * 203.93508 * 15 14 12 28 28 C 1.38171 * 119.96790 * 299.97286 * 4 2 1 29 29 H 0.96702 * 114.00118 * 60.00517 * 1 2 3 30 30 H 1.09000 * 109.47163 * 119.99721 * 2 1 3 31 31 H 1.48497 * 110.00220 * 59.99719 * 3 2 1 32 32 H 1.48500 * 110.00195 * 181.32382 * 3 2 1 33 33 H 1.07991 * 119.94515 * 359.97049 * 5 4 2 34 34 H 1.07999 * 119.97332 * 179.97438 * 6 5 4 35 35 H 1.08000 * 120.02436 * 179.72628 * 7 6 5 36 36 H 1.08997 * 109.47169 * 300.00051 * 10 9 8 37 37 H 1.08998 * 109.46675 * 60.00188 * 10 9 8 38 38 H 1.09001 * 109.47304 * 300.00788 * 11 10 9 39 39 H 1.09003 * 109.46688 * 60.00193 * 11 10 9 40 40 H 0.96999 * 120.00630 * 355.26286 * 14 12 11 41 41 H 1.07988 * 119.99352 * 0.03262 * 17 16 15 42 42 H 1.08008 * 120.00034 * 180.23994 * 18 17 16 43 43 H 1.07998 * 120.00516 * 179.97438 * 21 19 18 44 44 H 1.08004 * 119.99567 * 179.97438 * 22 21 19 45 45 H 1.09001 * 113.61382 * 25.43049 * 23 15 14 46 46 H 1.09000 * 113.61388 * 156.33792 * 23 15 14 47 47 H 0.96698 * 113.99790 * 180.02562 * 26 24 23 48 48 H 1.09000 * 113.61798 * 203.66306 * 27 15 14 49 49 H 1.09003 * 113.60934 * 334.56259 * 27 15 14 50 50 H 1.07994 * 120.03055 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7261 -0.0380 -2.1401 6 6 3.1882 -0.6869 -3.2704 7 6 2.8569 -2.0093 -3.4930 8 6 2.0594 -2.6864 -2.5816 9 8 1.7316 -3.9872 -2.7986 10 6 2.2426 -4.5956 -3.9864 11 6 1.7722 -6.0497 -4.0577 12 6 2.3106 -6.6911 -5.3106 13 8 3.0027 -6.0484 -6.0715 14 7 2.0228 -7.9787 -5.5856 15 6 2.4584 -8.5722 -6.8522 16 6 3.9434 -8.8240 -6.9004 17 6 4.5546 -9.1247 -8.1034 18 6 5.9174 -9.3510 -8.1488 19 6 6.6680 -9.2870 -6.9886 20 35 8.5314 -9.6032 -7.0490 21 6 6.0551 -8.9914 -5.7843 22 6 4.6932 -8.7597 -5.7408 23 6 1.9168 -7.8425 -8.0929 24 6 0.6978 -8.7766 -8.0130 25 1 0.3504 -9.1251 -8.9856 26 8 -0.3581 -8.2710 -7.1935 27 6 1.6124 -9.7794 -7.2901 28 6 1.5976 -2.0334 -1.4482 29 1 -0.3933 0.4416 -0.7651 30 1 1.7923 -0.5138 0.8900 31 1 1.5614 2.4680 1.2084 32 1 3.5345 1.7704 -0.0322 33 1 2.9858 0.9960 -1.9681 34 1 3.8086 -0.1594 -3.9797 35 1 3.2144 -2.5143 -4.3781 36 1 1.8783 -4.0524 -4.8584 37 1 3.3320 -4.5669 -3.9695 38 1 2.1367 -6.5927 -3.1856 39 1 0.6827 -6.0787 -4.0744 40 1 1.5275 -8.5125 -4.9450 41 1 3.9679 -9.1785 -9.0084 42 1 6.3955 -9.5821 -9.0893 43 1 6.6406 -8.9418 -4.8782 44 1 4.2145 -8.5293 -4.8005 45 1 1.6765 -6.7946 -7.9129 46 1 2.5231 -7.9914 -8.9863 47 1 -1.1274 -8.8543 -7.1391 48 1 2.1355 -10.4578 -7.9640 49 1 1.1264 -10.2952 -6.4619 50 1 0.9774 -2.5584 -0.7369 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_4549614.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:35 Heat of formation + Delta-G solvation = -55.670862 kcal Electronic energy + Delta-G solvation = -35025.059862 eV Core-core repulsion = 30224.828794 eV Total energy + Delta-G solvation = -4800.231068 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 448.076 amu Computer time = 1.64 seconds Orbital eigenvalues (eV) -42.20831 -41.32451 -40.08096 -39.42455 -39.03297 -37.27649 -36.27357 -34.26431 -33.19933 -33.07809 -32.47518 -31.97895 -30.84035 -30.30013 -27.14505 -26.96530 -26.14536 -24.84955 -23.85266 -23.69084 -22.54713 -22.08967 -21.40706 -20.29125 -19.38627 -18.72155 -18.20448 -17.84079 -17.65165 -17.44824 -17.21014 -17.08096 -16.78069 -16.40801 -16.21674 -16.08288 -15.86300 -15.47735 -15.38064 -15.15057 -14.91678 -14.65295 -14.56675 -14.45503 -14.34345 -14.21664 -13.99917 -13.69951 -13.36126 -13.18708 -13.06396 -12.93317 -12.85202 -12.58751 -12.42392 -12.38634 -12.26332 -12.00660 -11.84608 -11.69271 -11.64591 -11.45932 -11.33017 -10.94635 -10.89135 -10.51305 -10.10074 -10.07507 -9.94859 -9.57148 -9.29912 -4.98603 -0.01232 0.17363 0.25689 0.36512 0.59223 1.29416 1.53915 1.64370 1.67647 1.96253 2.41728 2.48660 2.64384 3.13341 3.43377 3.49231 3.52243 3.57614 3.64459 3.64597 3.72943 3.77074 3.84548 3.86054 3.87229 4.01581 4.07105 4.21048 4.25076 4.26039 4.34265 4.39029 4.41302 4.49003 4.59057 4.60004 4.64513 4.67523 4.72841 4.82399 4.85044 4.89588 4.95408 4.97718 5.02153 5.14399 5.15645 5.23427 5.31488 5.35499 5.41301 5.63387 5.67865 5.74196 6.30173 6.46584 6.75175 6.92670 7.18577 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.078 4.078 3 Si 0.786 3.214 4 C -0.084 4.084 5 C -0.157 4.157 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.117 3.883 9 O -0.325 6.325 10 C 0.078 3.922 11 C -0.134 4.134 12 C 0.525 3.475 13 O -0.567 6.567 14 N -0.687 5.687 15 C 0.189 3.811 16 C -0.061 4.061 17 C -0.109 4.109 18 C -0.094 4.094 19 C -0.107 4.107 20 Br -0.059 7.059 21 C -0.100 4.100 22 C -0.108 4.108 23 C -0.138 4.138 24 C 0.086 3.914 25 H 0.092 0.908 26 O -0.564 6.564 27 C -0.148 4.148 28 C -0.141 4.141 29 H 0.396 0.604 30 H 0.107 0.893 31 H -0.298 1.298 32 H -0.284 1.284 33 H 0.149 0.851 34 H 0.153 0.847 35 H 0.134 0.866 36 H 0.063 0.937 37 H 0.063 0.937 38 H 0.123 0.877 39 H 0.122 0.878 40 H 0.418 0.582 41 H 0.156 0.844 42 H 0.146 0.854 43 H 0.134 0.866 44 H 0.130 0.870 45 H 0.057 0.943 46 H 0.116 0.884 47 H 0.398 0.602 48 H 0.119 0.881 49 H 0.097 0.903 50 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.913 -3.476 -3.663 7.045 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.187 4.187 3 Si 0.691 3.309 4 C -0.084 4.084 5 C -0.174 4.174 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.072 3.928 9 O -0.239 6.239 10 C 0.003 3.997 11 C -0.173 4.173 12 C 0.312 3.688 13 O -0.446 6.446 14 N -0.339 5.339 15 C 0.102 3.898 16 C -0.063 4.063 17 C -0.128 4.128 18 C -0.114 4.114 19 C -0.186 4.186 20 Br 0.027 6.973 21 C -0.120 4.120 22 C -0.127 4.127 23 C -0.176 4.176 24 C 0.027 3.973 25 H 0.110 0.890 26 O -0.372 6.372 27 C -0.185 4.185 28 C -0.160 4.160 29 H 0.246 0.754 30 H 0.124 0.876 31 H -0.226 1.226 32 H -0.211 1.211 33 H 0.166 0.834 34 H 0.170 0.830 35 H 0.152 0.848 36 H 0.082 0.918 37 H 0.081 0.919 38 H 0.141 0.859 39 H 0.140 0.860 40 H 0.256 0.744 41 H 0.174 0.826 42 H 0.164 0.836 43 H 0.152 0.848 44 H 0.148 0.852 45 H 0.076 0.924 46 H 0.134 0.866 47 H 0.249 0.751 48 H 0.137 0.863 49 H 0.116 0.884 50 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.901 -2.522 -3.073 4.921 hybrid contribution -0.407 -1.200 0.456 1.347 sum -3.309 -3.722 -2.617 5.626 Atomic orbital electron populations 1.86466 1.17119 1.82244 1.50454 1.25303 0.85399 1.11292 0.96744 0.93522 0.77807 0.74863 0.84675 1.20252 0.97610 0.93582 0.96973 1.21174 1.00363 1.00731 0.95177 1.21247 0.97554 0.93396 0.97092 1.21532 1.03200 0.97164 1.01114 1.19150 0.95221 0.83504 0.94958 1.85955 1.71440 1.22845 1.43634 1.22389 0.98727 0.93160 0.85452 1.21429 1.04735 0.94010 0.97149 1.20447 0.79252 0.82009 0.87054 1.90749 1.38939 1.63537 1.51369 1.45334 1.57614 1.11326 1.19647 1.20015 0.88565 0.96223 0.85031 1.20177 0.95592 0.96944 0.93551 1.21198 0.93954 0.99371 0.98243 1.21324 0.94230 0.98422 0.97387 1.21956 0.90816 1.08590 0.97236 1.96748 1.06296 1.95092 1.99187 1.21237 0.95380 0.98479 0.96896 1.21037 0.93009 0.99583 0.99062 1.23566 0.96458 0.99742 0.97810 1.22678 0.87148 0.93440 0.94050 0.89039 1.86466 1.29434 1.50279 1.71055 1.24018 0.97052 0.95256 1.02210 1.20316 1.03812 0.94694 0.97179 0.75432 0.87564 1.22596 1.21120 0.83405 0.82975 0.84770 0.91823 0.91856 0.85854 0.86034 0.74392 0.82608 0.83643 0.84791 0.85226 0.92367 0.86620 0.75135 0.86271 0.88417 0.85482 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.06 12.77 -148.98 -1.90 -2.96 16 2 C -0.08 -0.10 2.82 71.24 0.20 0.10 16 3 Si 0.79 -1.15 29.79 68.60 2.04 0.89 16 4 C -0.08 -0.24 5.39 -19.88 -0.11 -0.34 16 5 C -0.16 -0.09 8.67 22.28 0.19 0.10 16 6 C -0.08 -0.09 10.04 22.25 0.22 0.13 16 7 C -0.21 -0.90 9.04 22.36 0.20 -0.70 16 8 C 0.12 0.76 6.69 22.51 0.15 0.91 16 9 O -0.32 -1.92 10.14 -92.39 -0.94 -2.86 16 10 C 0.08 0.22 4.03 71.98 0.29 0.51 16 11 C -0.13 0.30 6.07 29.85 0.18 0.49 16 12 C 0.53 0.70 6.50 87.66 0.57 1.27 16 13 O -0.57 -5.37 14.45 -3.04 -0.04 -5.41 16 14 N -0.69 2.52 3.64 -423.92 -1.54 0.97 16 15 C 0.19 -0.57 0.94 3.39 0.00 -0.56 16 16 C -0.06 -0.02 4.86 -19.86 -0.10 -0.12 16 17 C -0.11 0.10 8.70 22.27 0.19 0.29 16 18 C -0.09 -0.14 9.79 22.29 0.22 0.08 16 19 C -0.11 -0.45 6.22 22.31 0.14 -0.31 16 20 Br -0.06 -0.27 33.70 -20.37 -0.69 -0.95 16 21 C -0.10 -0.38 9.79 22.28 0.22 -0.16 16 22 C -0.11 -0.25 9.04 22.26 0.20 -0.05 16 23 C -0.14 0.19 6.55 31.13 0.20 0.39 16 24 C 0.09 -0.57 5.28 31.12 0.16 -0.41 16 25 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 26 O -0.56 2.92 13.09 -148.98 -1.95 0.97 16 27 C -0.15 1.28 7.13 31.12 0.22 1.50 16 28 C -0.14 -0.84 9.55 22.37 0.21 -0.63 16 29 H 0.40 -2.46 8.70 -74.06 -0.64 -3.11 16 30 H 0.11 0.27 7.96 -2.39 -0.02 0.25 16 31 H -0.30 -1.71 7.11 99.48 0.71 -1.01 16 32 H -0.28 -0.85 7.11 99.48 0.71 -0.14 16 33 H 0.15 -0.61 4.87 -2.92 -0.01 -0.63 16 34 H 0.15 -0.57 8.06 -2.91 -0.02 -0.59 16 35 H 0.13 0.42 6.30 -2.91 -0.02 0.40 16 36 H 0.06 0.28 7.62 -2.39 -0.02 0.26 16 37 H 0.06 0.26 7.62 -2.39 -0.02 0.25 16 38 H 0.12 -0.75 8.14 -2.39 -0.02 -0.77 16 39 H 0.12 -0.56 8.14 -2.39 -0.02 -0.58 16 40 H 0.42 -3.72 8.72 -92.71 -0.81 -4.53 16 41 H 0.16 -1.00 6.55 -2.92 -0.02 -1.02 16 42 H 0.15 -0.23 8.06 -2.91 -0.02 -0.25 16 43 H 0.13 0.29 8.06 -2.91 -0.02 0.26 16 44 H 0.13 0.03 6.86 -2.91 -0.02 0.01 16 45 H 0.06 0.35 6.94 -2.39 -0.02 0.33 16 46 H 0.12 -0.47 6.23 -2.39 -0.01 -0.48 16 47 H 0.40 -5.27 9.12 -74.06 -0.68 -5.95 16 48 H 0.12 -1.27 7.78 -2.39 -0.02 -1.29 16 49 H 0.10 -1.06 8.11 -2.39 -0.02 -1.08 16 50 H 0.13 0.82 8.06 -2.91 -0.02 0.79 16 Total: 0.00 -24.10 428.93 -2.50 -26.60 By element: Atomic # 1 Polarization: -18.70 SS G_CDS: -1.06 Total: -19.76 kcal Atomic # 6 Polarization: -1.07 SS G_CDS: 3.59 Total: 2.51 kcal Atomic # 7 Polarization: 2.52 SS G_CDS: -1.54 Total: 0.97 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -4.83 Total: -10.26 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: 2.04 Total: 0.89 kcal Atomic # 35 Polarization: -0.27 SS G_CDS: -0.69 Total: -0.95 kcal Total: -24.10 -2.50 -26.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_4549614.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.072 kcal (2) G-P(sol) polarization free energy of solvation -24.103 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.175 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.599 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds