Wall clock time and date at job start Sat Mar 6 2021 23:45:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86305 * 109.47055 * 2 1 4 4 C 1.50700 * 109.46999 * 240.00470 * 2 1 3 5 5 C 1.38240 * 119.97631 * 120.02126 * 4 2 1 6 6 C 1.38288 * 120.11824 * 179.97438 * 5 4 2 7 7 C 1.38124 * 120.05050 * 359.76586 * 6 5 4 8 8 C 1.38759 * 119.94588 * 0.51075 * 7 6 5 9 9 O 1.35894 * 120.05703 * 179.74306 * 8 7 6 10 10 C 1.42903 * 117.00266 * 359.72620 * 9 8 7 11 11 C 1.52991 * 109.47460 * 180.02562 * 10 9 8 12 12 C 1.52998 * 109.47268 * 180.02562 * 11 10 9 13 13 C 1.50699 * 109.47069 * 180.02562 * 12 11 10 14 14 O 1.21280 * 120.00459 * 0.02562 * 13 12 11 15 15 N 1.34785 * 119.99839 * 179.97438 * 13 12 11 16 16 C 1.46501 * 119.99701 * 184.86036 * 15 13 12 17 17 C 1.50696 * 112.85194 * 65.45833 * 16 15 13 18 18 C 1.38242 * 119.99372 * 195.62806 * 17 16 15 19 19 C 1.38217 * 120.01253 * 180.29769 * 18 17 16 20 20 C 1.38328 * 119.98521 * 359.46378 * 19 18 17 21 21 Br 1.89106 * 120.00694 * 180.23294 * 20 19 18 22 22 C 1.38326 * 119.98323 * 0.25881 * 20 19 18 23 23 C 1.38213 * 119.98934 * 0.02562 * 22 20 19 24 24 C 1.53782 * 113.61776 * 294.25711 * 16 15 13 25 25 C 1.53950 * 87.01937 * 270.77574 * 24 16 15 26 26 H 1.09003 * 113.74233 * 220.05779 * 25 24 16 27 27 O 1.42894 * 113.54134 * 89.18921 * 25 24 16 28 28 C 1.53781 * 87.11467 * 334.63627 * 25 24 16 29 29 C 1.38172 * 119.97262 * 300.00036 * 4 2 1 30 30 H 0.96702 * 114.00243 * 59.99504 * 1 2 3 31 31 H 1.08994 * 109.46979 * 120.00034 * 2 1 3 32 32 H 1.48506 * 109.99732 * 60.00025 * 3 2 1 33 33 H 1.48492 * 109.99974 * 181.31761 * 3 2 1 34 34 H 1.08001 * 119.94047 * 359.97438 * 5 4 2 35 35 H 1.07997 * 119.97379 * 180.02562 * 6 5 4 36 36 H 1.07999 * 120.02804 * 180.28075 * 7 6 5 37 37 H 1.08999 * 109.46976 * 59.99527 * 10 9 8 38 38 H 1.09005 * 109.46802 * 300.00171 * 10 9 8 39 39 H 1.08999 * 109.47484 * 59.99750 * 11 10 9 40 40 H 1.09005 * 109.47181 * 299.99851 * 11 10 9 41 41 H 1.08994 * 109.47501 * 59.99731 * 12 11 10 42 42 H 1.09006 * 109.47130 * 299.99529 * 12 11 10 43 43 H 0.96996 * 119.99999 * 4.85896 * 15 13 12 44 44 H 1.08002 * 119.99272 * 0.02562 * 18 17 16 45 45 H 1.07993 * 120.00738 * 179.74865 * 19 18 17 46 46 H 1.08003 * 120.00120 * 180.02562 * 22 20 19 47 47 H 1.07999 * 119.99757 * 180.02562 * 23 22 20 48 48 H 1.09008 * 113.61024 * 25.35148 * 24 16 15 49 49 H 1.08997 * 113.61341 * 156.24993 * 24 16 15 50 50 H 0.96704 * 114.00590 * 82.50239 * 27 25 24 51 51 H 1.09002 * 113.61151 * 270.81822 * 28 25 24 52 52 H 1.08997 * 113.62066 * 139.91175 * 28 25 24 53 53 H 1.08004 * 120.02683 * 359.97438 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7264 -0.0381 -2.1399 6 6 3.1894 -0.6872 -3.2698 7 6 2.8622 -2.0109 -3.4899 8 6 2.0595 -2.6863 -2.5817 9 8 1.7319 -3.9872 -2.7987 10 6 2.2439 -4.5958 -3.9859 11 6 1.7725 -6.0495 -4.0579 12 6 2.3211 -6.7013 -5.3287 13 6 1.8563 -8.1331 -5.3999 14 8 1.1548 -8.5873 -4.5210 15 7 2.2193 -8.9085 -6.4408 16 6 1.6820 -10.2657 -6.5655 17 6 0.1937 -10.2866 -6.8010 18 6 -0.5181 -11.4579 -6.6211 19 6 -1.8822 -11.4790 -6.8429 20 6 -2.5369 -10.3250 -7.2342 21 35 -4.4043 -10.3516 -7.5315 22 6 -1.8253 -9.1518 -7.4086 23 6 -0.4603 -9.1331 -7.1922 24 6 2.1421 -11.2157 -5.4472 25 6 3.3478 -11.5556 -6.3420 26 1 3.6173 -12.6117 -6.3327 27 8 4.4701 -10.6947 -6.1388 28 6 2.4724 -11.1539 -7.5409 29 6 1.5972 -2.0331 -1.4487 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5138 0.8899 32 1 1.5614 2.4679 1.2086 33 1 3.5345 1.7703 -0.0321 34 1 2.9865 0.9959 -1.9676 35 1 3.8107 -0.1599 -3.9785 36 1 3.2277 -2.5188 -4.3702 37 1 3.3333 -4.5672 -3.9682 38 1 1.8804 -4.0528 -4.8584 39 1 0.6830 -6.0778 -4.0759 40 1 2.1357 -6.5929 -3.1855 41 1 3.4106 -6.6731 -5.3103 42 1 1.9583 -6.1582 -6.2014 43 1 2.8362 -8.5679 -7.1074 44 1 -0.0075 -12.3578 -6.3114 45 1 -2.4375 -12.3951 -6.7063 46 1 -2.3362 -8.2505 -7.7137 47 1 0.0954 -8.2170 -7.3279 48 1 2.4131 -10.7039 -4.5236 49 1 1.4684 -12.0568 -5.2841 50 1 5.0246 -10.9422 -5.3862 51 1 1.8892 -11.9782 -7.9513 52 1 3.0097 -10.5924 -8.3052 53 1 0.9766 -2.5582 -0.7376 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_4549616.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:45:41 Heat of formation + Delta-G solvation = -62.356431 kcal Electronic energy + Delta-G solvation = -36638.118853 eV Core-core repulsion = 31682.060258 eV Total energy + Delta-G solvation = -4956.058595 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 462.092 amu Computer time = 1.80 seconds Orbital eigenvalues (eV) -42.15769 -41.27492 -40.02895 -39.40808 -39.13073 -37.30399 -36.27257 -34.88923 -33.97476 -33.17288 -32.45036 -32.00871 -31.22868 -30.34163 -28.42087 -26.97325 -26.84803 -25.51934 -23.96740 -23.70992 -23.45777 -22.43850 -21.87194 -21.32777 -20.28861 -19.20627 -18.69450 -18.12902 -17.88937 -17.78356 -17.44874 -17.14779 -17.05749 -16.81876 -16.34962 -16.30011 -16.12849 -15.99485 -15.48244 -15.39030 -15.25589 -14.98435 -14.74104 -14.65644 -14.41289 -14.35821 -14.19091 -14.18119 -13.71890 -13.47616 -13.26313 -13.18848 -13.11296 -13.04274 -12.74832 -12.60207 -12.35120 -12.28657 -12.27624 -12.24767 -11.97829 -11.64678 -11.63102 -11.60004 -11.50866 -11.33123 -10.99261 -10.70399 -10.51268 -10.07672 -10.05556 -9.91709 -9.56305 -9.24937 -4.99372 -0.00926 0.21188 0.25839 0.40427 0.59259 1.29308 1.64417 1.66068 1.88051 1.97552 2.34199 2.48753 2.68281 3.10157 3.46682 3.48906 3.53887 3.56901 3.65559 3.67752 3.80625 3.82596 3.86259 3.87282 3.87532 3.97682 4.10693 4.20181 4.24722 4.25479 4.32892 4.37793 4.38526 4.40906 4.43734 4.52874 4.59535 4.62288 4.66820 4.69099 4.79092 4.85191 4.89611 4.98309 4.99191 5.00282 5.01612 5.14726 5.15594 5.15925 5.28462 5.32918 5.38394 5.44975 5.67591 5.74353 5.74542 6.42282 6.56339 6.73787 6.82839 7.30106 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.085 4.085 3 Si 0.794 3.206 4 C -0.085 4.085 5 C -0.160 4.160 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.116 3.884 9 O -0.339 6.339 10 C 0.058 3.942 11 C -0.098 4.098 12 C -0.129 4.129 13 C 0.513 3.487 14 O -0.572 6.572 15 N -0.691 5.691 16 C 0.189 3.811 17 C -0.060 4.060 18 C -0.111 4.111 19 C -0.095 4.095 20 C -0.107 4.107 21 Br -0.058 7.058 22 C -0.099 4.099 23 C -0.108 4.108 24 C -0.170 4.170 25 C 0.087 3.913 26 H 0.091 0.909 27 O -0.561 6.561 28 C -0.116 4.116 29 C -0.153 4.153 30 H 0.395 0.605 31 H 0.102 0.898 32 H -0.300 1.300 33 H -0.281 1.281 34 H 0.148 0.852 35 H 0.160 0.840 36 H 0.153 0.847 37 H 0.082 0.918 38 H 0.084 0.916 39 H 0.059 0.941 40 H 0.058 0.942 41 H 0.123 0.877 42 H 0.125 0.875 43 H 0.418 0.582 44 H 0.154 0.846 45 H 0.145 0.855 46 H 0.136 0.864 47 H 0.133 0.867 48 H 0.060 0.940 49 H 0.106 0.894 50 H 0.395 0.605 51 H 0.124 0.876 52 H 0.093 0.907 53 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.096 0.659 -8.150 10.826 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.193 4.193 3 Si 0.699 3.301 4 C -0.085 4.085 5 C -0.178 4.178 6 C -0.089 4.089 7 C -0.224 4.224 8 C 0.071 3.929 9 O -0.253 6.253 10 C -0.016 4.016 11 C -0.136 4.136 12 C -0.169 4.169 13 C 0.301 3.699 14 O -0.450 6.450 15 N -0.343 5.343 16 C 0.101 3.899 17 C -0.062 4.062 18 C -0.129 4.129 19 C -0.115 4.115 20 C -0.186 4.186 21 Br 0.027 6.973 22 C -0.119 4.119 23 C -0.127 4.127 24 C -0.209 4.209 25 C 0.027 3.973 26 H 0.109 0.891 27 O -0.369 6.369 28 C -0.154 4.154 29 C -0.172 4.172 30 H 0.245 0.755 31 H 0.119 0.881 32 H -0.229 1.229 33 H -0.207 1.207 34 H 0.166 0.834 35 H 0.178 0.822 36 H 0.171 0.829 37 H 0.100 0.900 38 H 0.102 0.898 39 H 0.077 0.923 40 H 0.077 0.923 41 H 0.141 0.859 42 H 0.143 0.857 43 H 0.255 0.745 44 H 0.172 0.828 45 H 0.162 0.838 46 H 0.154 0.846 47 H 0.151 0.849 48 H 0.079 0.921 49 H 0.124 0.876 50 H 0.245 0.755 51 H 0.142 0.858 52 H 0.111 0.889 53 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 6.092 0.765 -7.100 9.387 hybrid contribution 0.514 -0.917 0.870 1.365 sum 6.606 -0.152 -6.230 9.081 Atomic orbital electron populations 1.86471 1.17359 1.82293 1.50446 1.25402 0.85307 1.11777 0.96853 0.93499 0.77744 0.74336 0.84558 1.20217 0.97825 0.93446 0.97029 1.21190 1.00419 1.00758 0.95412 1.21315 0.97334 0.93508 0.96792 1.21602 1.02632 0.96902 1.01307 1.19206 0.95207 0.83573 0.94940 1.86054 1.71663 1.22906 1.44724 1.22986 0.99551 0.93211 0.85857 1.21108 1.01447 0.92885 0.98153 1.21533 1.04493 0.91005 0.99835 1.21014 0.79281 0.88810 0.80817 1.90752 1.39242 1.75704 1.39302 1.45468 1.48346 1.13123 1.27404 1.19974 0.87949 0.83351 0.98602 1.20151 0.95596 0.93719 0.96714 1.21202 0.93218 0.98793 0.99734 1.21315 0.95079 0.97342 0.97749 1.21961 0.90756 0.97646 1.08278 1.96745 1.05830 1.99222 1.95469 1.21253 0.94582 0.97044 0.99020 1.21064 0.93581 0.98773 0.99299 1.24153 0.99530 0.99406 0.97776 1.22731 0.85267 0.94173 0.95112 0.89120 1.86364 1.39669 1.55945 1.54881 1.23451 0.96147 0.99613 0.96171 1.20313 1.04243 0.94960 0.97651 0.75468 0.88093 1.22879 1.20750 0.83437 0.82245 0.82942 0.90014 0.89810 0.92257 0.92340 0.85851 0.85686 0.74461 0.82832 0.83756 0.84575 0.84920 0.92129 0.87621 0.75483 0.85752 0.88877 0.86800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.90 12.77 -148.98 -1.90 -3.80 16 2 C -0.08 -0.18 2.82 71.24 0.20 0.02 16 3 Si 0.79 -1.25 29.79 68.60 2.04 0.79 16 4 C -0.08 -0.25 5.39 -19.88 -0.11 -0.36 16 5 C -0.16 0.16 8.67 22.28 0.19 0.36 16 6 C -0.07 0.18 10.04 22.25 0.22 0.41 16 7 C -0.21 0.08 9.04 22.37 0.20 0.28 16 8 C 0.12 0.62 6.69 22.51 0.15 0.77 16 9 O -0.34 -2.24 10.14 -92.36 -0.94 -3.17 16 10 C 0.06 -0.11 4.74 71.98 0.34 0.23 16 11 C -0.10 -0.04 4.87 30.59 0.15 0.11 16 12 C -0.13 0.78 5.70 29.85 0.17 0.95 16 13 C 0.51 0.36 6.24 87.66 0.55 0.90 16 14 O -0.57 -6.03 14.47 -3.03 -0.04 -6.08 16 15 N -0.69 2.57 3.83 -423.91 -1.62 0.94 16 16 C 0.19 -0.43 0.93 3.38 0.00 -0.43 16 17 C -0.06 -0.07 4.72 -19.86 -0.09 -0.17 16 18 C -0.11 -0.04 8.84 22.27 0.20 0.15 16 19 C -0.10 -0.24 9.79 22.29 0.22 -0.02 16 20 C -0.11 -0.53 6.22 22.31 0.14 -0.39 16 21 Br -0.06 -0.30 33.70 -20.37 -0.69 -0.98 16 22 C -0.10 -0.41 9.79 22.28 0.22 -0.19 16 23 C -0.11 -0.29 8.84 22.27 0.20 -0.09 16 24 C -0.17 0.29 6.60 31.18 0.21 0.49 16 25 C 0.09 -0.52 5.28 31.18 0.16 -0.35 16 26 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 27 O -0.56 2.78 13.09 -148.98 -1.95 0.83 16 28 C -0.12 0.77 7.13 31.12 0.22 0.99 16 29 C -0.15 -1.07 9.55 22.37 0.21 -0.86 16 30 H 0.40 -2.01 8.70 -74.06 -0.64 -2.65 16 31 H 0.10 0.42 7.96 -2.39 -0.02 0.40 16 32 H -0.30 -1.80 7.11 99.48 0.71 -1.09 16 33 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 34 H 0.15 -0.84 4.87 -2.91 -0.01 -0.85 16 35 H 0.16 -1.38 8.06 -2.91 -0.02 -1.40 16 36 H 0.15 -0.89 6.30 -2.91 -0.02 -0.91 16 37 H 0.08 -0.45 7.65 -2.39 -0.02 -0.47 16 38 H 0.08 -0.49 7.67 -2.38 -0.02 -0.51 16 39 H 0.06 0.30 8.10 -2.39 -0.02 0.28 16 40 H 0.06 0.30 8.10 -2.38 -0.02 0.28 16 41 H 0.12 -1.32 8.14 -2.39 -0.02 -1.34 16 42 H 0.13 -1.42 8.14 -2.38 -0.02 -1.44 16 43 H 0.42 -3.54 8.66 -92.71 -0.80 -4.34 16 44 H 0.15 -0.73 6.40 -2.91 -0.02 -0.75 16 45 H 0.14 -0.05 8.06 -2.91 -0.02 -0.08 16 46 H 0.14 0.29 8.06 -2.91 -0.02 0.26 16 47 H 0.13 -0.02 6.74 -2.91 -0.02 -0.04 16 48 H 0.06 0.26 7.24 -2.38 -0.02 0.24 16 49 H 0.11 -0.36 6.10 -2.39 -0.01 -0.38 16 50 H 0.40 -4.12 9.12 -74.05 -0.68 -4.80 16 51 H 0.12 -1.12 7.87 -2.39 -0.02 -1.14 16 52 H 0.09 -0.68 8.09 -2.39 -0.02 -0.69 16 53 H 0.11 1.10 8.06 -2.91 -0.02 1.08 16 Total: 0.00 -27.30 450.10 -2.44 -29.73 By element: Atomic # 1 Polarization: -19.98 SS G_CDS: -1.10 Total: -21.07 kcal Atomic # 6 Polarization: -0.94 SS G_CDS: 3.75 Total: 2.81 kcal Atomic # 7 Polarization: 2.57 SS G_CDS: -1.62 Total: 0.94 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -4.83 Total: -12.22 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: 2.04 Total: 0.79 kcal Atomic # 35 Polarization: -0.30 SS G_CDS: -0.69 Total: -0.98 kcal Total: -27.30 -2.44 -29.73 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_4549616.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.622 kcal (2) G-P(sol) polarization free energy of solvation -27.296 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.917 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.439 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.356 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.80 seconds