Wall clock time and date at job start Sat Mar 6 2021 23:46:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35990 * 116.99820 * 2 1 4 4 C 1.39152 * 120.07440 * 180.02562 * 3 2 1 5 5 O 1.35993 * 120.07083 * 359.97438 * 4 3 2 6 6 C 1.42901 * 116.99927 * 179.72887 * 5 4 3 7 7 C 1.50700 * 109.47185 * 179.97438 * 6 5 4 8 8 O 1.21280 * 120.00304 * 0.02562 * 7 6 5 9 9 N 1.34778 * 120.00363 * 179.97438 * 7 6 5 10 10 C 1.46499 * 120.00495 * 174.90241 * 9 7 6 11 11 C 1.50702 * 112.84502 * 295.30352 * 10 9 7 12 12 C 1.38246 * 119.98702 * 164.01351 * 11 10 9 13 13 C 1.38213 * 120.00689 * 179.72807 * 12 11 10 14 14 C 1.38329 * 119.99044 * 0.54544 * 13 12 11 15 15 Br 1.89103 * 120.01089 * 179.70546 * 14 13 12 16 16 C 1.38318 * 119.97960 * 359.72792 * 14 13 12 17 17 C 1.38220 * 119.99029 * 0.02562 * 16 14 13 18 18 C 1.53783 * 113.61725 * 164.10721 * 10 9 7 19 19 C 1.54049 * 86.98301 * 270.83805 * 18 10 9 20 20 H 1.09006 * 113.69226 * 220.00524 * 19 18 10 21 21 O 1.42900 * 113.61498 * 89.11979 * 19 18 10 22 22 C 1.53778 * 87.08089 * 334.56736 * 19 18 10 23 23 C 1.38568 * 119.85603 * 179.72685 * 4 3 2 24 24 C 1.38245 * 119.99884 * 0.27075 * 23 4 3 25 25 N 1.48002 * 119.92647 * 179.97438 * 24 23 4 26 26 O 1.21806 * 119.99926 * 0.02562 * 25 24 23 27 27 O 1.21800 * 119.99739 * 180.02562 * 25 24 23 28 28 C 1.38253 * 120.14339 * 359.97438 * 24 23 4 29 29 C 1.50701 * 119.92223 * 179.97438 * 28 24 23 30 30 O 1.42902 * 109.46919 * 74.99926 * 29 28 24 31 31 Si 1.86298 * 109.47125 * 194.99564 * 29 28 24 32 32 C 1.38238 * 120.14722 * 0.02562 * 28 24 23 33 33 H 1.09004 * 109.47061 * 179.97438 * 1 2 3 34 34 H 1.09001 * 109.47011 * 299.99117 * 1 2 3 35 35 H 1.08989 * 109.47807 * 60.00137 * 1 2 3 36 36 H 1.09000 * 109.47241 * 60.00050 * 6 5 4 37 37 H 1.09001 * 109.47459 * 299.99730 * 6 5 4 38 38 H 0.97000 * 119.99666 * 354.89841 * 9 7 6 39 39 H 1.08001 * 119.99407 * 359.97438 * 12 11 10 40 40 H 1.08007 * 120.00519 * 180.24928 * 13 12 11 41 41 H 1.08004 * 120.00619 * 179.97438 * 16 14 13 42 42 H 1.08006 * 119.99009 * 179.97438 * 17 16 14 43 43 H 1.09000 * 113.60716 * 25.43248 * 18 10 9 44 44 H 1.09000 * 113.61271 * 156.33014 * 18 10 9 45 45 H 0.96698 * 114.00194 * 82.49913 * 21 19 18 46 46 H 1.09001 * 113.61509 * 270.88801 * 22 19 18 47 47 H 1.08993 * 113.61502 * 139.97577 * 22 19 18 48 48 H 1.07997 * 119.99801 * 180.25503 * 23 4 3 49 49 H 1.08997 * 109.47466 * 314.99574 * 29 28 24 50 50 H 0.96698 * 114.00191 * 60.00290 * 30 29 28 51 51 H 1.48498 * 110.00491 * 179.97438 * 31 29 28 52 52 H 1.48505 * 110.00282 * 301.32340 * 31 29 28 53 53 H 1.08001 * 119.99928 * 180.02562 * 32 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1795 0.1477 -0.0005 6 6 5.6002 0.3008 -0.0071 7 6 6.2519 -1.0581 -0.0055 8 8 5.5671 -2.0590 0.0003 9 7 7.5957 -1.1611 -0.0114 10 6 8.2301 -2.4766 0.1029 11 6 7.9628 -3.1419 1.4285 12 6 8.1969 -4.4957 1.5817 13 6 7.9572 -5.1052 2.7989 14 6 7.4725 -4.3625 3.8605 15 35 7.1365 -5.1974 5.5236 16 6 7.2331 -3.0091 3.7050 17 6 7.4779 -2.3994 2.4889 18 6 9.7139 -2.4823 -0.3012 19 6 9.2379 -2.7774 -1.7363 20 1 9.8590 -3.5016 -2.2635 21 8 8.9804 -1.6020 -2.5071 22 6 7.9756 -3.3906 -1.1075 23 6 4.0602 2.5234 -0.0063 24 6 3.3028 3.6799 -0.0058 25 7 3.9713 5.0004 -0.0113 26 8 5.1875 5.0672 -0.0168 27 8 3.3053 6.0201 -0.0104 28 6 1.9223 3.6057 -0.0001 29 6 1.1015 4.8696 0.0010 30 8 1.1293 5.4567 -1.3016 31 14 -0.6578 4.4672 0.4632 32 6 1.2932 2.3748 0.0056 33 1 -0.3633 -1.0277 -0.0005 34 1 -0.3633 0.5137 0.8901 35 1 -0.3634 0.5137 -0.8899 36 1 5.9103 0.8531 0.8800 37 1 5.9026 0.8480 -0.9000 38 1 8.1428 -0.3641 -0.0915 39 1 8.5708 -5.0764 0.7514 40 1 8.1439 -6.1621 2.9198 41 1 6.8543 -2.4289 4.5334 42 1 7.2906 -1.3427 2.3673 43 1 10.1998 -1.5128 -0.1915 44 1 10.2849 -3.2962 0.1455 45 1 9.7706 -1.2117 -2.9051 46 1 8.0723 -4.4523 -0.8807 47 1 7.0593 -3.1539 -1.6482 48 1 5.1384 2.5840 -0.0109 49 1 1.5159 5.5713 0.7248 50 1 0.7746 4.8868 -1.9976 51 1 -1.4776 5.7054 0.4685 52 1 -1.2239 3.4867 -0.4978 53 1 0.2146 2.3196 0.0096 There are 82 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 82 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_4549636.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:46:10 Heat of formation + Delta-G solvation = -67.196351 kcal Electronic energy + Delta-G solvation = -45614.937629 eV Core-core repulsion = 39664.508150 eV Total energy + Delta-G solvation = -5950.429478 eV No. of doubly occupied orbitals = 82 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 509.070 amu Computer time = 2.31 seconds Orbital eigenvalues (eV) -43.39746 -42.31774 -41.99405 -40.43880 -39.61629 -39.33848 -39.06785 -37.73560 -37.24384 -36.27422 -34.27626 -33.17847 -32.70756 -32.55078 -32.01921 -30.44351 -29.74933 -28.80091 -27.93132 -26.98860 -25.98351 -25.40106 -24.03150 -23.80148 -23.23349 -22.56995 -21.82049 -20.82241 -20.31147 -19.86395 -19.56074 -18.87051 -18.69163 -18.61653 -18.49258 -17.81406 -17.69896 -17.61491 -17.40366 -16.97368 -16.82751 -16.50758 -16.41890 -16.21311 -16.06211 -15.75105 -15.67433 -15.26192 -15.20463 -14.93459 -14.73690 -14.58384 -14.46657 -14.37341 -13.96861 -13.78277 -13.71810 -13.49771 -13.33573 -13.08630 -13.03596 -12.71270 -12.60577 -12.50536 -12.49380 -12.42037 -12.38699 -12.26611 -12.25391 -12.12294 -11.71595 -11.71037 -11.45585 -11.32095 -10.96276 -10.92442 -10.65919 -10.50193 -10.15896 -10.07383 -9.57187 -9.51386 -5.01239 -1.36196 -0.45637 -0.01467 0.16398 0.25818 0.30438 0.59776 1.12277 1.20324 1.41869 1.45524 1.85232 1.86891 1.92361 2.28321 2.48260 2.96118 3.10692 3.15306 3.24102 3.38796 3.41730 3.44551 3.46912 3.55609 3.64763 3.71993 3.81655 3.86400 3.89611 3.92325 3.93746 4.03898 4.07674 4.23450 4.24784 4.29813 4.35400 4.36309 4.39952 4.58322 4.59129 4.67437 4.69709 4.74560 4.81718 4.84057 4.86686 4.97393 5.01439 5.12921 5.15825 5.26442 5.28310 5.52541 5.60996 5.73879 6.02516 6.39333 6.41989 6.48702 6.92372 7.10446 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.001 4.001 2 O -0.307 6.307 3 C 0.169 3.831 4 C 0.102 3.898 5 O -0.289 6.289 6 C 0.026 3.974 7 C 0.519 3.481 8 O -0.548 6.548 9 N -0.684 5.684 10 C 0.192 3.808 11 C -0.062 4.062 12 C -0.109 4.109 13 C -0.094 4.094 14 C -0.106 4.106 15 Br -0.057 7.057 16 C -0.099 4.099 17 C -0.109 4.109 18 C -0.145 4.145 19 C 0.086 3.914 20 H 0.093 0.907 21 O -0.565 6.565 22 C -0.141 4.141 23 C -0.109 4.109 24 C -0.042 4.042 25 N 0.036 4.964 26 O -0.189 6.189 27 O -0.160 6.160 28 C -0.034 4.034 29 C -0.102 4.102 30 O -0.529 6.529 31 Si 0.774 3.226 32 C -0.172 4.172 33 H 0.122 0.878 34 H 0.089 0.911 35 H 0.075 0.925 36 H 0.127 0.873 37 H 0.122 0.878 38 H 0.421 0.579 39 H 0.156 0.844 40 H 0.146 0.854 41 H 0.136 0.864 42 H 0.131 0.869 43 H 0.101 0.899 44 H 0.121 0.879 45 H 0.399 0.601 46 H 0.117 0.883 47 H 0.054 0.946 48 H 0.182 0.818 49 H 0.129 0.871 50 H 0.383 0.617 51 H -0.294 1.294 52 H -0.250 1.250 53 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.297 -3.469 -0.712 4.221 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.219 6.219 3 C 0.120 3.880 4 C 0.054 3.946 5 O -0.201 6.201 6 C -0.051 4.051 7 C 0.304 3.696 8 O -0.424 6.424 9 N -0.338 5.338 10 C 0.104 3.896 11 C -0.063 4.063 12 C -0.127 4.127 13 C -0.113 4.113 14 C -0.185 4.185 15 Br 0.028 6.972 16 C -0.119 4.119 17 C -0.128 4.128 18 C -0.183 4.183 19 C 0.027 3.973 20 H 0.111 0.889 21 O -0.374 6.374 22 C -0.179 4.179 23 C -0.129 4.129 24 C -0.126 4.126 25 N 0.549 4.451 26 O -0.398 6.398 27 O -0.375 6.375 28 C -0.036 4.036 29 C -0.209 4.209 30 O -0.336 6.336 31 Si 0.675 3.325 32 C -0.191 4.191 33 H 0.140 0.860 34 H 0.108 0.892 35 H 0.093 0.907 36 H 0.145 0.855 37 H 0.140 0.860 38 H 0.260 0.740 39 H 0.174 0.826 40 H 0.164 0.836 41 H 0.154 0.846 42 H 0.149 0.851 43 H 0.119 0.881 44 H 0.139 0.861 45 H 0.250 0.750 46 H 0.135 0.865 47 H 0.073 0.927 48 H 0.199 0.801 49 H 0.147 0.853 50 H 0.232 0.768 51 H -0.221 1.221 52 H -0.175 1.175 53 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 0.246 -5.146 0.184 5.155 hybrid contribution 1.170 1.419 -1.595 2.435 sum 1.416 -3.727 -1.412 4.230 Atomic orbital electron populations 1.23742 0.74975 1.06925 1.03758 1.86328 1.24550 1.24677 1.86302 1.18671 0.89186 0.86298 0.93842 1.17964 0.88739 0.85184 1.02684 1.86305 1.18346 1.26801 1.88672 1.22892 0.78907 0.96392 1.06953 1.20180 0.82925 0.90360 0.76109 1.90793 1.63673 1.39314 1.48601 1.45195 1.05015 1.09358 1.74201 1.20017 0.95577 0.83502 0.90458 1.20115 0.97183 0.94239 0.94811 1.21205 1.00185 0.93799 0.97556 1.21325 0.97474 1.00777 0.91761 1.21963 1.07514 0.95960 0.93110 1.96748 1.94978 1.80472 1.24997 1.21239 0.98923 0.93033 0.98665 1.21038 0.99033 1.00592 0.92168 1.24065 0.91986 1.05670 0.96542 1.22738 0.95898 0.87952 0.90703 0.88943 1.86461 1.38869 1.42871 1.69174 1.23613 0.98759 1.00163 0.95383 1.20892 1.02950 0.88173 1.00890 1.20524 0.92660 0.81971 1.17464 1.43683 1.00821 1.03361 0.97216 1.94509 0.96487 1.94097 1.54739 1.94575 1.64436 1.25332 1.53197 1.20094 0.90988 0.97371 0.95144 1.25777 1.11679 0.93777 0.89640 1.86772 1.85284 1.45021 1.16484 0.94231 0.70198 0.79746 0.88330 1.21215 1.02202 0.88408 1.07243 0.86009 0.89223 0.90693 0.85502 0.86030 0.74039 0.82612 0.83619 0.84641 0.85145 0.88074 0.86099 0.75033 0.86521 0.92686 0.80061 0.85349 0.76807 1.22119 1.17511 0.79621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.12 16 2 O -0.31 -0.42 10.28 -79.57 -0.82 -1.24 16 3 C 0.17 0.04 6.70 22.57 0.15 0.19 16 4 C 0.10 0.15 6.70 22.57 0.15 0.30 16 5 O -0.29 -1.22 9.45 -67.05 -0.63 -1.86 16 6 C 0.03 -0.08 5.22 71.24 0.37 0.29 16 7 C 0.52 1.06 6.29 87.66 0.55 1.61 16 8 O -0.55 -6.70 14.99 16.01 0.24 -6.46 16 9 N -0.68 2.79 3.84 -423.91 -1.63 1.16 16 10 C 0.19 -0.61 0.93 3.39 0.00 -0.61 16 11 C -0.06 -0.02 4.69 -19.86 -0.09 -0.11 16 12 C -0.11 0.08 8.86 22.27 0.20 0.28 16 13 C -0.09 -0.14 9.79 22.29 0.22 0.08 16 14 C -0.11 -0.43 6.22 22.31 0.14 -0.29 16 15 Br -0.06 -0.25 33.70 -20.37 -0.69 -0.93 16 16 C -0.10 -0.35 9.79 22.28 0.22 -0.13 16 17 C -0.11 -0.22 8.80 22.26 0.20 -0.02 16 18 C -0.14 1.34 7.14 31.21 0.22 1.57 16 19 C 0.09 -0.60 5.28 31.21 0.16 -0.44 16 20 H 0.09 -0.92 8.14 -2.38 -0.02 -0.94 16 21 O -0.57 3.15 13.09 -148.98 -1.95 1.20 16 22 C -0.14 0.18 6.60 31.12 0.21 0.38 16 23 C -0.11 0.00 8.54 22.35 0.19 0.19 16 24 C -0.04 -0.14 6.85 36.38 0.25 0.11 16 25 N 0.04 0.33 4.45 -46.46 -0.21 0.12 16 26 O -0.19 -1.97 18.44 18.88 0.35 -1.62 16 27 O -0.16 -1.96 14.62 25.10 0.37 -1.59 16 28 C -0.03 0.01 5.26 -19.86 -0.10 -0.10 16 29 C -0.10 -0.02 1.74 71.24 0.12 0.11 16 30 O -0.53 -1.87 11.80 -129.62 -1.53 -3.40 16 31 Si 0.77 -4.05 30.24 68.60 2.07 -1.97 16 32 C -0.17 0.65 7.64 22.35 0.17 0.82 16 33 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 34 H 0.09 -1.09 7.65 -2.39 -0.02 -1.11 16 35 H 0.07 -0.76 7.67 -2.39 -0.02 -0.78 16 36 H 0.13 -1.18 7.66 -2.39 -0.02 -1.20 16 37 H 0.12 -0.95 7.66 -2.39 -0.02 -0.97 16 38 H 0.42 -4.30 8.66 -92.71 -0.80 -5.11 16 39 H 0.16 -0.96 6.38 -2.91 -0.02 -0.98 16 40 H 0.15 -0.23 8.06 -2.91 -0.02 -0.25 16 41 H 0.14 0.22 8.06 -2.91 -0.02 0.20 16 42 H 0.13 -0.08 6.73 -2.91 -0.02 -0.10 16 43 H 0.10 -1.20 8.09 -2.39 -0.02 -1.22 16 44 H 0.12 -1.36 7.88 -2.39 -0.02 -1.37 16 45 H 0.40 -5.49 9.12 -74.06 -0.68 -6.17 16 46 H 0.12 -0.47 6.09 -2.39 -0.01 -0.49 16 47 H 0.05 0.37 7.30 -2.39 -0.02 0.35 16 48 H 0.18 -0.79 5.85 -2.91 -0.02 -0.81 16 49 H 0.13 0.34 6.07 -2.39 -0.01 0.32 16 50 H 0.38 -1.53 8.70 -74.06 -0.64 -2.17 16 51 H -0.29 -0.92 7.11 99.48 0.71 -0.21 16 52 H -0.25 1.55 6.68 99.48 0.66 2.21 16 53 H 0.19 -1.71 3.09 -2.91 -0.01 -1.72 16 Total: 0.00 -33.87 458.56 -1.04 -34.91 By element: Atomic # 1 Polarization: -22.62 SS G_CDS: -1.06 Total: -23.68 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: 4.44 Total: 5.35 kcal Atomic # 7 Polarization: 3.12 SS G_CDS: -1.84 Total: 1.29 kcal Atomic # 8 Polarization: -10.98 SS G_CDS: -3.98 Total: -14.96 kcal Atomic # 14 Polarization: -4.05 SS G_CDS: 2.07 Total: -1.97 kcal Atomic # 35 Polarization: -0.25 SS G_CDS: -0.69 Total: -0.93 kcal Total: -33.87 -1.04 -34.91 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_4549636.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.285 kcal (2) G-P(sol) polarization free energy of solvation -33.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.156 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.912 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.31 seconds