Wall clock time and date at job start Sat Mar 6 2021 23:46:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47184 * 2 1 4 4 C 1.50707 * 109.46699 * 119.99558 * 2 1 3 5 5 C 1.38265 * 119.94076 * 65.00149 * 4 2 1 6 6 C 1.38147 * 120.05258 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.94389 * 0.02562 * 6 5 4 8 8 O 1.35898 * 120.05602 * 180.02562 * 7 6 5 9 9 C 1.42902 * 116.99947 * 180.02562 * 8 7 6 10 10 F 1.39892 * 109.47339 * 60.00247 * 9 8 7 11 11 F 1.39897 * 109.47329 * 299.99559 * 9 8 7 12 12 C 1.50702 * 109.46863 * 179.97438 * 9 8 7 13 13 O 1.21286 * 120.00469 * 0.02562 * 12 9 8 14 14 N 1.34777 * 119.99827 * 179.97438 * 12 9 8 15 15 C 1.46509 * 120.00040 * 174.84612 * 14 12 9 16 16 C 1.50690 * 112.85121 * 290.79213 * 15 14 12 17 17 C 1.38244 * 119.99303 * 165.65229 * 16 15 14 18 18 C 1.38217 * 120.00974 * 179.72466 * 17 16 15 19 19 C 1.38328 * 119.99128 * 0.54427 * 18 17 16 20 20 Br 1.89093 * 120.00879 * 179.70470 * 19 18 17 21 21 C 1.38323 * 119.97635 * 359.72805 * 19 18 17 22 22 C 1.38217 * 119.99357 * 359.97438 * 21 19 18 23 23 C 1.53777 * 113.61474 * 159.47799 * 15 14 12 24 24 C 1.53784 * 87.08366 * 270.88902 * 23 15 14 25 25 H 1.09003 * 113.60934 * 220.01585 * 24 23 15 26 26 O 1.42904 * 113.69167 * 89.12850 * 24 23 15 27 27 C 1.53776 * 87.07805 * 334.56635 * 24 23 15 28 28 C 1.38739 * 119.89096 * 0.27518 * 7 6 5 29 29 C 1.38147 * 119.93775 * 359.42594 * 28 7 6 30 30 H 0.96707 * 114.00135 * 300.00523 * 1 2 3 31 31 H 1.08995 * 109.47192 * 239.99372 * 2 1 3 32 32 H 1.48505 * 109.99770 * 178.68064 * 3 2 1 33 33 H 1.48503 * 109.99985 * 299.99499 * 3 2 1 34 34 H 1.07996 * 119.97733 * 359.97438 * 5 4 2 35 35 H 1.07994 * 120.02995 * 179.97438 * 6 5 4 36 36 H 0.96998 * 120.00371 * 354.84598 * 14 12 9 37 37 H 1.07999 * 119.99172 * 359.97411 * 17 16 15 38 38 H 1.08009 * 120.00114 * 180.29429 * 18 17 16 39 39 H 1.08002 * 120.00099 * 180.02562 * 21 19 18 40 40 H 1.08000 * 119.99514 * 179.97438 * 22 21 19 41 41 H 1.09005 * 113.61364 * 25.44126 * 23 15 14 42 42 H 1.08999 * 113.61256 * 156.33753 * 23 15 14 43 43 H 0.96694 * 113.99826 * 82.46231 * 26 24 23 44 44 H 1.08993 * 113.61733 * 270.88354 * 27 24 23 45 45 H 1.09007 * 113.61189 * 139.98277 * 27 24 23 46 46 H 1.07997 * 120.03054 * 179.72112 * 28 7 6 47 47 H 1.08002 * 119.96853 * 180.28122 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6839 -2.0604 1.3974 6 6 2.1436 -2.7140 2.5243 7 6 2.8536 -2.0145 3.4892 8 8 3.3074 -2.6552 4.5984 9 6 4.0304 -1.8718 5.5501 10 9 3.2130 -0.8387 6.0208 11 9 5.1654 -1.3273 4.9398 12 6 4.4502 -2.7451 6.7043 13 8 4.1594 -3.9226 6.7111 14 7 5.1498 -2.2179 7.7286 15 6 5.4604 -3.0378 8.9023 16 6 4.2421 -3.3654 9.7264 17 6 4.3030 -4.3597 10.6849 18 6 3.1873 -4.6566 11.4449 19 6 2.0064 -3.9664 11.2385 20 35 0.4774 -4.3779 12.2721 21 6 1.9443 -2.9755 10.2754 22 6 3.0622 -2.6750 9.5201 23 6 6.6417 -2.5054 9.7305 24 6 7.5541 -3.3544 8.8296 25 1 8.3638 -3.8466 9.3683 26 8 8.0027 -2.6696 7.6583 27 6 6.3365 -4.2611 8.5847 28 6 3.0951 -0.6585 3.3225 29 6 2.6386 -0.0109 2.1909 30 1 -0.3934 0.4418 0.7651 31 1 1.7923 -0.5139 -0.8899 32 1 3.5347 1.7702 0.0321 33 1 1.5616 2.4679 -1.2086 34 1 1.1308 -2.6045 0.6461 35 1 1.9498 -3.7684 2.6543 36 1 5.4476 -1.2956 7.6887 37 1 5.2237 -4.9018 10.8427 38 1 3.2364 -5.4302 12.1970 39 1 1.0227 -2.4360 10.1142 40 1 3.0137 -1.9016 8.7679 41 1 6.8003 -1.4321 9.6251 42 1 6.6284 -2.8321 10.7703 43 1 8.7682 -2.0977 7.8061 44 1 6.2397 -5.0679 9.3112 45 1 6.2486 -4.6054 7.5542 46 1 3.6437 -0.1107 4.0744 47 1 2.8302 1.0437 2.0584 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_4549640.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:46:21 Heat of formation + Delta-G solvation = -138.724848 kcal Electronic energy + Delta-G solvation = -39835.566230 eV Core-core repulsion = 34248.363339 eV Total energy + Delta-G solvation = -5587.202892 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.042 amu Computer time = 2.96 seconds Orbital eigenvalues (eV) -50.79282 -48.76667 -42.46338 -41.29017 -40.20346 -39.59112 -39.11060 -37.23629 -36.55673 -34.53647 -33.22775 -32.38941 -32.10745 -31.96482 -30.42754 -29.00905 -27.27695 -26.44705 -25.62648 -24.44768 -23.95424 -22.93829 -22.54915 -22.21745 -20.74787 -20.43314 -19.83426 -19.59904 -18.86707 -18.51803 -18.03558 -17.50992 -17.28112 -17.02849 -16.68279 -16.51192 -16.29173 -16.22649 -16.01535 -15.79293 -15.65930 -15.41343 -15.37929 -15.24798 -15.19300 -15.00913 -14.93265 -14.70450 -14.46146 -14.33335 -14.26390 -14.13747 -13.95662 -13.64458 -13.58877 -13.21323 -12.95975 -12.84838 -12.55307 -12.36680 -12.32332 -12.11753 -11.88719 -11.81250 -11.66970 -11.29445 -11.25173 -11.24159 -10.49163 -10.46671 -10.14387 -10.12747 -9.62730 -9.51416 -5.06750 -0.07937 0.08952 0.19914 0.20350 0.49972 0.62823 0.77444 1.26230 1.60895 1.77422 1.95162 2.02579 2.38710 2.51074 2.70340 2.82590 3.13704 3.24024 3.30901 3.39170 3.43322 3.50909 3.55673 3.66943 3.69253 3.75885 3.78603 4.03170 4.11826 4.18140 4.22758 4.26857 4.34963 4.40922 4.44438 4.45775 4.52679 4.54977 4.65904 4.80618 4.83592 4.85980 4.95443 4.98079 5.08486 5.09282 5.12218 5.36588 5.38483 5.43083 5.65337 5.79717 5.90622 6.45229 6.46732 6.54829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.065 4.065 3 Si 0.683 3.317 4 C -0.143 4.143 5 C -0.056 4.056 6 C -0.126 4.126 7 C 0.108 3.892 8 O -0.286 6.286 9 C 0.432 3.568 10 F -0.176 7.176 11 F -0.173 7.173 12 C 0.520 3.480 13 O -0.456 6.456 14 N -0.676 5.676 15 C 0.195 3.805 16 C -0.065 4.065 17 C -0.103 4.103 18 C -0.085 4.085 19 C -0.089 4.089 20 Br -0.047 7.047 21 C -0.084 4.084 22 C -0.102 4.102 23 C -0.159 4.159 24 C 0.079 3.921 25 H 0.080 0.920 26 O -0.546 6.546 27 C -0.132 4.132 28 C -0.187 4.187 29 C -0.076 4.076 30 H 0.380 0.620 31 H 0.115 0.885 32 H -0.257 1.257 33 H -0.253 1.253 34 H 0.139 0.861 35 H 0.141 0.859 36 H 0.413 0.587 37 H 0.136 0.864 38 H 0.137 0.863 39 H 0.135 0.865 40 H 0.125 0.875 41 H 0.087 0.913 42 H 0.113 0.887 43 H 0.384 0.616 44 H 0.113 0.887 45 H 0.095 0.905 46 H 0.136 0.864 47 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.123 3.580 4.663 7.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.176 4.176 3 Si 0.585 3.415 4 C -0.143 4.143 5 C -0.074 4.074 6 C -0.145 4.145 7 C 0.065 3.935 8 O -0.202 6.202 9 C 0.354 3.646 10 F -0.157 7.157 11 F -0.154 7.154 12 C 0.298 3.702 13 O -0.325 6.325 14 N -0.330 5.330 15 C 0.109 3.891 16 C -0.067 4.067 17 C -0.122 4.122 18 C -0.105 4.105 19 C -0.169 4.169 20 Br 0.039 6.961 21 C -0.104 4.104 22 C -0.121 4.121 23 C -0.197 4.197 24 C 0.020 3.980 25 H 0.098 0.902 26 O -0.351 6.351 27 C -0.169 4.169 28 C -0.205 4.205 29 C -0.093 4.093 30 H 0.227 0.773 31 H 0.132 0.868 32 H -0.182 1.182 33 H -0.178 1.178 34 H 0.157 0.843 35 H 0.158 0.842 36 H 0.250 0.750 37 H 0.153 0.847 38 H 0.155 0.845 39 H 0.152 0.848 40 H 0.142 0.858 41 H 0.106 0.894 42 H 0.131 0.869 43 H 0.232 0.768 44 H 0.131 0.869 45 H 0.113 0.887 46 H 0.154 0.846 47 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 3.377 2.359 3.845 5.635 hybrid contribution 1.025 0.700 -0.204 1.257 sum 4.402 3.059 3.641 6.480 Atomic orbital electron populations 1.86513 1.16989 1.81693 1.49270 1.25009 0.85300 1.10001 0.97245 0.94827 0.81150 0.78107 0.87382 1.20367 1.01264 0.95155 0.97549 1.20894 0.96721 0.93512 0.96228 1.20540 0.99904 1.01114 0.92926 1.18982 0.96560 0.91570 0.86427 1.86675 1.67922 1.36251 1.29350 1.21835 0.76533 0.79504 0.86696 1.93181 1.73231 1.60734 1.88565 1.93203 1.51467 1.86533 1.84218 1.19249 0.80604 0.88008 0.82365 1.90880 1.51835 1.13857 1.75974 1.45216 1.54794 1.16367 1.16609 1.20021 0.91315 0.93579 0.84229 1.19838 0.94431 0.96207 0.96181 1.20904 0.98818 0.96993 0.95519 1.21120 0.91159 0.98866 0.99307 1.21883 0.93640 1.01326 1.00016 1.96790 1.35930 1.93946 1.69423 1.21125 0.99220 0.95990 0.94037 1.20928 0.92050 0.99863 0.99259 1.24076 0.93640 1.02061 0.99905 1.22732 0.95573 0.93267 0.86438 0.90241 1.86524 1.52181 1.63714 1.32693 1.23572 0.92112 0.95818 1.05433 1.21472 1.05082 0.93117 1.00856 1.20776 0.96546 0.99282 0.92743 0.77313 0.86761 1.18155 1.17778 0.84286 0.84153 0.75016 0.84670 0.84521 0.84755 0.85757 0.89406 0.86883 0.76836 0.86923 0.88686 0.84621 0.84856 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.12 12.83 -35.23 -0.45 -0.57 16 2 C -0.06 0.01 2.80 36.01 0.10 0.11 16 3 Si 0.68 -0.66 29.80 -169.99 -5.07 -5.72 16 4 C -0.14 -0.07 5.35 -104.60 -0.56 -0.63 16 5 C -0.06 -0.05 9.68 -39.60 -0.38 -0.44 16 6 C -0.13 -0.24 9.99 -39.43 -0.39 -0.63 16 7 C 0.11 0.31 6.48 -39.21 -0.25 0.06 16 8 O -0.29 -1.11 9.60 -39.33 -0.38 -1.49 16 9 C 0.43 0.86 2.05 36.01 0.07 0.94 16 10 F -0.18 -0.15 15.28 2.25 0.03 -0.12 16 11 F -0.17 -0.29 15.31 2.25 0.03 -0.26 16 12 C 0.52 1.07 5.92 -10.98 -0.06 1.00 16 13 O -0.46 -2.33 14.89 -14.36 -0.21 -2.54 16 14 N -0.68 0.65 3.73 -47.92 -0.18 0.47 16 15 C 0.19 -0.29 0.94 -132.16 -0.12 -0.42 16 16 C -0.06 0.02 4.90 -104.62 -0.51 -0.50 16 17 C -0.10 0.10 8.77 -39.59 -0.35 -0.25 16 18 C -0.08 0.00 9.79 -39.56 -0.39 -0.39 16 19 C -0.09 -0.11 6.22 -39.52 -0.25 -0.35 16 20 Br -0.05 -0.07 33.70 -68.01 -2.29 -2.36 16 21 C -0.08 -0.09 9.79 -39.56 -0.39 -0.47 16 22 C -0.10 -0.07 9.00 -39.59 -0.36 -0.42 16 23 C -0.16 0.66 7.13 -25.92 -0.18 0.47 16 24 C 0.08 -0.25 5.27 -25.92 -0.14 -0.39 16 25 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 26 O -0.55 1.17 13.09 -35.23 -0.46 0.71 16 27 C -0.13 0.15 6.55 -25.92 -0.17 -0.02 16 28 C -0.19 -0.30 8.26 -39.43 -0.33 -0.62 16 29 C -0.08 -0.02 8.66 -39.61 -0.34 -0.37 16 30 H 0.38 -1.35 8.70 45.56 0.40 -0.95 16 31 H 0.12 0.01 7.96 -51.93 -0.41 -0.40 16 32 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 33 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 34 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 35 H 0.14 0.12 8.06 -52.49 -0.42 -0.30 16 36 H 0.41 -1.28 8.69 -40.82 -0.35 -1.64 16 37 H 0.14 -0.48 6.47 -52.49 -0.34 -0.81 16 38 H 0.14 -0.20 8.06 -52.48 -0.42 -0.62 16 39 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 40 H 0.12 0.00 6.79 -52.49 -0.36 -0.35 16 41 H 0.09 -0.44 8.10 -51.93 -0.42 -0.86 16 42 H 0.11 -0.58 7.83 -51.93 -0.41 -0.99 16 43 H 0.38 -2.33 9.12 45.56 0.42 -1.92 16 44 H 0.11 -0.32 6.16 -51.93 -0.32 -0.64 16 45 H 0.09 0.19 6.91 -51.93 -0.36 -0.17 16 46 H 0.14 0.10 5.10 -52.49 -0.27 -0.17 16 47 H 0.13 -0.26 4.90 -52.49 -0.26 -0.52 16 LS Contribution 417.12 15.07 6.29 6.29 Total: 0.00 -9.38 417.12 -11.68 -21.06 By element: Atomic # 1 Polarization: -8.16 SS G_CDS: -3.99 Total: -12.15 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -5.00 Total: -3.31 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.18 Total: 0.47 kcal Atomic # 8 Polarization: -2.40 SS G_CDS: -1.50 Total: -3.90 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.07 Total: -0.37 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.07 Total: -5.72 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.29 Total: -2.36 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -9.38 -11.68 -21.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_4549640.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.661 kcal (2) G-P(sol) polarization free energy of solvation -9.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.042 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.96 seconds