Wall clock time and date at job start Sat Mar 6 2021 23:46:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47184 * 2 1 4 4 C 1.50707 * 109.46699 * 119.99558 * 2 1 3 5 5 C 1.38265 * 119.94076 * 65.00149 * 4 2 1 6 6 C 1.38147 * 120.05258 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.94389 * 0.02562 * 6 5 4 8 8 O 1.35898 * 120.05602 * 180.02562 * 7 6 5 9 9 C 1.42902 * 116.99947 * 180.02562 * 8 7 6 10 10 F 1.39892 * 109.47339 * 60.00247 * 9 8 7 11 11 F 1.39897 * 109.47329 * 299.99559 * 9 8 7 12 12 C 1.50702 * 109.46863 * 179.97438 * 9 8 7 13 13 O 1.21286 * 120.00469 * 0.02562 * 12 9 8 14 14 N 1.34777 * 119.99827 * 179.97438 * 12 9 8 15 15 C 1.46509 * 120.00040 * 174.84612 * 14 12 9 16 16 C 1.50690 * 112.85121 * 290.79213 * 15 14 12 17 17 C 1.38244 * 119.99303 * 165.65229 * 16 15 14 18 18 C 1.38217 * 120.00974 * 179.72466 * 17 16 15 19 19 C 1.38328 * 119.99128 * 0.54427 * 18 17 16 20 20 Br 1.89093 * 120.00879 * 179.70470 * 19 18 17 21 21 C 1.38323 * 119.97635 * 359.72805 * 19 18 17 22 22 C 1.38217 * 119.99357 * 359.97438 * 21 19 18 23 23 C 1.53777 * 113.61474 * 159.47799 * 15 14 12 24 24 C 1.53784 * 87.08366 * 270.88902 * 23 15 14 25 25 H 1.09003 * 113.60934 * 220.01585 * 24 23 15 26 26 O 1.42904 * 113.69167 * 89.12850 * 24 23 15 27 27 C 1.53776 * 87.07805 * 334.56635 * 24 23 15 28 28 C 1.38739 * 119.89096 * 0.27518 * 7 6 5 29 29 C 1.38147 * 119.93775 * 359.42594 * 28 7 6 30 30 H 0.96707 * 114.00135 * 300.00523 * 1 2 3 31 31 H 1.08995 * 109.47192 * 239.99372 * 2 1 3 32 32 H 1.48505 * 109.99770 * 178.68064 * 3 2 1 33 33 H 1.48503 * 109.99985 * 299.99499 * 3 2 1 34 34 H 1.07996 * 119.97733 * 359.97438 * 5 4 2 35 35 H 1.07994 * 120.02995 * 179.97438 * 6 5 4 36 36 H 0.96998 * 120.00371 * 354.84598 * 14 12 9 37 37 H 1.07999 * 119.99172 * 359.97411 * 17 16 15 38 38 H 1.08009 * 120.00114 * 180.29429 * 18 17 16 39 39 H 1.08002 * 120.00099 * 180.02562 * 21 19 18 40 40 H 1.08000 * 119.99514 * 179.97438 * 22 21 19 41 41 H 1.09005 * 113.61364 * 25.44126 * 23 15 14 42 42 H 1.08999 * 113.61256 * 156.33753 * 23 15 14 43 43 H 0.96694 * 113.99826 * 82.46231 * 26 24 23 44 44 H 1.08993 * 113.61733 * 270.88354 * 27 24 23 45 45 H 1.09007 * 113.61189 * 139.98277 * 27 24 23 46 46 H 1.07997 * 120.03054 * 179.72112 * 28 7 6 47 47 H 1.08002 * 119.96853 * 180.28122 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 1.6839 -2.0604 1.3974 6 6 2.1436 -2.7140 2.5243 7 6 2.8536 -2.0145 3.4892 8 8 3.3074 -2.6552 4.5984 9 6 4.0304 -1.8718 5.5501 10 9 3.2130 -0.8387 6.0208 11 9 5.1654 -1.3273 4.9398 12 6 4.4502 -2.7451 6.7043 13 8 4.1594 -3.9226 6.7111 14 7 5.1498 -2.2179 7.7286 15 6 5.4604 -3.0378 8.9023 16 6 4.2421 -3.3654 9.7264 17 6 4.3030 -4.3597 10.6849 18 6 3.1873 -4.6566 11.4449 19 6 2.0064 -3.9664 11.2385 20 35 0.4774 -4.3779 12.2721 21 6 1.9443 -2.9755 10.2754 22 6 3.0622 -2.6750 9.5201 23 6 6.6417 -2.5054 9.7305 24 6 7.5541 -3.3544 8.8296 25 1 8.3638 -3.8466 9.3683 26 8 8.0027 -2.6696 7.6583 27 6 6.3365 -4.2611 8.5847 28 6 3.0951 -0.6585 3.3225 29 6 2.6386 -0.0109 2.1909 30 1 -0.3934 0.4418 0.7651 31 1 1.7923 -0.5139 -0.8899 32 1 3.5347 1.7702 0.0321 33 1 1.5616 2.4679 -1.2086 34 1 1.1308 -2.6045 0.6461 35 1 1.9498 -3.7684 2.6543 36 1 5.4476 -1.2956 7.6887 37 1 5.2237 -4.9018 10.8427 38 1 3.2364 -5.4302 12.1970 39 1 1.0227 -2.4360 10.1142 40 1 3.0137 -1.9016 8.7679 41 1 6.8003 -1.4321 9.6251 42 1 6.6284 -2.8321 10.7703 43 1 8.7682 -2.0977 7.8061 44 1 6.2397 -5.0679 9.3112 45 1 6.2486 -4.6054 7.5542 46 1 3.6437 -0.1107 4.0744 47 1 2.8302 1.0437 2.0584 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_4549640.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:46:20 Heat of formation + Delta-G solvation = -138.096436 kcal Electronic energy + Delta-G solvation = -39835.538980 eV Core-core repulsion = 34248.363339 eV Total energy + Delta-G solvation = -5587.175642 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 470.042 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -50.92711 -48.89492 -42.39553 -41.40054 -40.27915 -39.51836 -39.18212 -37.26325 -36.42773 -34.52020 -33.21220 -32.46434 -32.10529 -32.00855 -30.42310 -29.10978 -27.05597 -26.46517 -25.57386 -24.49947 -23.92239 -22.98586 -22.57765 -22.18728 -20.74808 -20.47627 -19.88127 -19.73442 -18.73900 -18.54456 -17.88323 -17.59822 -17.26578 -17.04607 -16.74347 -16.43876 -16.36784 -16.25082 -16.01753 -15.82885 -15.69687 -15.44394 -15.41024 -15.30513 -15.23294 -15.14036 -14.90216 -14.64454 -14.42247 -14.42082 -14.37133 -14.25540 -13.82932 -13.64618 -13.41442 -13.10901 -13.05438 -12.64647 -12.49983 -12.39758 -12.32332 -12.17815 -11.93294 -11.77841 -11.69953 -11.32670 -11.24327 -11.08545 -10.46928 -10.40798 -10.22285 -10.10518 -9.62430 -9.62211 -5.02001 -0.06540 -0.01302 0.12321 0.22510 0.41870 0.58433 0.64240 1.29103 1.62195 1.64536 1.93786 1.95163 2.42703 2.42982 2.69607 3.08937 3.18621 3.37418 3.41323 3.47771 3.52212 3.54239 3.63145 3.69620 3.72586 3.77814 3.84532 4.06515 4.17289 4.21351 4.26244 4.36094 4.37098 4.49925 4.55921 4.62658 4.68132 4.79608 4.80387 4.82418 4.87098 4.93029 4.96856 5.01184 5.06335 5.13514 5.17383 5.31346 5.34523 5.42090 5.69838 5.78362 5.83234 6.45186 6.75761 6.91904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.069 4.069 3 Si 0.771 3.229 4 C -0.142 4.142 5 C -0.058 4.058 6 C -0.137 4.137 7 C 0.085 3.915 8 O -0.306 6.306 9 C 0.434 3.566 10 F -0.170 7.170 11 F -0.172 7.172 12 C 0.520 3.480 13 O -0.494 6.494 14 N -0.660 5.660 15 C 0.184 3.816 16 C -0.067 4.067 17 C -0.101 4.101 18 C -0.090 4.090 19 C -0.104 4.104 20 Br -0.056 7.056 21 C -0.097 4.097 22 C -0.115 4.115 23 C -0.142 4.142 24 C 0.084 3.916 25 H 0.100 0.900 26 O -0.568 6.568 27 C -0.141 4.141 28 C -0.193 4.193 29 C -0.075 4.075 30 H 0.396 0.604 31 H 0.111 0.889 32 H -0.285 1.285 33 H -0.297 1.297 34 H 0.149 0.851 35 H 0.143 0.857 36 H 0.424 0.576 37 H 0.164 0.836 38 H 0.150 0.850 39 H 0.136 0.864 40 H 0.124 0.876 41 H 0.101 0.899 42 H 0.131 0.869 43 H 0.400 0.600 44 H 0.128 0.872 45 H 0.059 0.941 46 H 0.142 0.858 47 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.348 4.478 5.544 8.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.179 4.179 3 Si 0.677 3.323 4 C -0.142 4.142 5 C -0.076 4.076 6 C -0.156 4.156 7 C 0.043 3.957 8 O -0.223 6.223 9 C 0.356 3.644 10 F -0.151 7.151 11 F -0.153 7.153 12 C 0.298 3.702 13 O -0.367 6.367 14 N -0.313 5.313 15 C 0.098 3.902 16 C -0.069 4.069 17 C -0.120 4.120 18 C -0.110 4.110 19 C -0.183 4.183 20 Br 0.030 6.970 21 C -0.117 4.117 22 C -0.134 4.134 23 C -0.179 4.179 24 C 0.025 3.975 25 H 0.118 0.882 26 O -0.377 6.377 27 C -0.179 4.179 28 C -0.212 4.212 29 C -0.092 4.092 30 H 0.246 0.754 31 H 0.129 0.871 32 H -0.212 1.212 33 H -0.225 1.225 34 H 0.167 0.833 35 H 0.160 0.840 36 H 0.263 0.737 37 H 0.181 0.819 38 H 0.168 0.832 39 H 0.154 0.846 40 H 0.142 0.858 41 H 0.120 0.880 42 H 0.149 0.851 43 H 0.251 0.749 44 H 0.146 0.854 45 H 0.078 0.922 46 H 0.160 0.840 47 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 4.612 3.287 4.767 7.403 hybrid contribution 0.651 0.434 -0.554 0.959 sum 5.263 3.721 4.213 7.701 Atomic orbital electron populations 1.86480 1.17038 1.82156 1.50501 1.25138 0.85377 1.10676 0.96724 0.93813 0.77949 0.75440 0.85093 1.20504 1.00931 0.95041 0.97765 1.21060 0.96602 0.93932 0.96048 1.20693 1.00186 1.01455 0.93256 1.19254 0.97519 0.92353 0.86596 1.86648 1.68359 1.37301 1.29985 1.21805 0.76491 0.79579 0.86490 1.93186 1.73083 1.60396 1.88442 1.93198 1.51374 1.86495 1.84240 1.19348 0.80604 0.87552 0.82738 1.90856 1.53646 1.15296 1.76875 1.45211 1.53250 1.16904 1.15937 1.20299 0.91611 0.94109 0.84173 1.20048 0.94489 0.96071 0.96272 1.21212 0.99586 0.96540 0.94666 1.21370 0.90976 0.98935 0.99697 1.21995 0.93912 1.02015 1.00413 1.96764 1.36651 1.93991 1.69607 1.21222 0.99584 0.96407 0.94459 1.21032 0.92511 1.00440 0.99463 1.24078 0.90944 1.02800 1.00116 1.22743 0.95574 0.92906 0.86258 0.88199 1.86485 1.53277 1.64301 1.33649 1.23682 0.93841 0.96637 1.03727 1.21618 1.05289 0.92725 1.01539 1.21026 0.95781 1.00364 0.92029 0.75425 0.87116 1.21198 1.22461 0.83313 0.83955 0.73740 0.81900 0.83210 0.84649 0.85778 0.88045 0.85068 0.74930 0.85400 0.92240 0.84022 0.82571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.07 12.83 -148.98 -1.91 -1.84 16 2 C -0.07 0.05 2.80 71.24 0.20 0.25 16 3 Si 0.77 -1.87 29.80 68.60 2.04 0.18 16 4 C -0.14 -0.12 5.35 -19.85 -0.11 -0.22 16 5 C -0.06 -0.14 9.68 22.25 0.22 0.08 16 6 C -0.14 -0.70 9.99 22.37 0.22 -0.48 16 7 C 0.09 0.61 6.48 22.51 0.15 0.76 16 8 O -0.31 -2.99 9.60 -73.37 -0.70 -3.70 16 9 C 0.43 2.31 2.05 71.24 0.15 2.46 16 10 F -0.17 -0.45 15.28 44.97 0.69 0.24 16 11 F -0.17 -0.73 15.31 44.97 0.69 -0.04 16 12 C 0.52 2.88 5.92 87.66 0.52 3.40 16 13 O -0.49 -6.15 14.89 15.99 0.24 -5.91 16 14 N -0.66 1.02 3.73 -423.92 -1.58 -0.56 16 15 C 0.18 -0.62 0.94 3.38 0.00 -0.62 16 16 C -0.07 0.04 4.90 -19.86 -0.10 -0.06 16 17 C -0.10 0.28 8.77 22.27 0.20 0.47 16 18 C -0.09 0.02 9.79 22.29 0.22 0.24 16 19 C -0.10 -0.32 6.22 22.31 0.14 -0.18 16 20 Br -0.06 -0.20 33.70 -20.37 -0.69 -0.89 16 21 C -0.10 -0.31 9.79 22.29 0.22 -0.09 16 22 C -0.12 -0.25 9.00 22.27 0.20 -0.05 16 23 C -0.14 1.46 7.13 31.12 0.22 1.68 16 24 C 0.08 -0.66 5.27 31.12 0.16 -0.49 16 25 H 0.10 -1.16 8.14 -2.39 -0.02 -1.18 16 26 O -0.57 2.87 13.09 -148.98 -1.95 0.92 16 27 C -0.14 0.35 6.55 31.12 0.20 0.55 16 28 C -0.19 -0.70 8.26 22.37 0.18 -0.52 16 29 C -0.07 -0.02 8.66 22.25 0.19 0.18 16 30 H 0.40 -3.17 8.70 -74.05 -0.64 -3.81 16 31 H 0.11 0.00 7.96 -2.39 -0.02 -0.02 16 32 H -0.29 -0.69 7.11 99.48 0.71 0.02 16 33 H -0.30 -1.49 7.11 99.48 0.71 -0.78 16 34 H 0.15 -0.03 8.06 -2.91 -0.02 -0.05 16 35 H 0.14 0.52 8.06 -2.91 -0.02 0.49 16 36 H 0.42 -2.70 8.69 -92.71 -0.81 -3.51 16 37 H 0.16 -1.47 6.47 -2.91 -0.02 -1.49 16 38 H 0.15 -0.52 8.06 -2.91 -0.02 -0.55 16 39 H 0.14 0.24 8.06 -2.91 -0.02 0.21 16 40 H 0.12 0.15 6.79 -2.91 -0.02 0.13 16 41 H 0.10 -1.26 8.10 -2.38 -0.02 -1.28 16 42 H 0.13 -1.76 7.83 -2.39 -0.02 -1.78 16 43 H 0.40 -5.35 9.12 -74.06 -0.68 -6.03 16 44 H 0.13 -0.83 6.16 -2.39 -0.01 -0.84 16 45 H 0.06 0.33 6.91 -2.38 -0.02 0.31 16 46 H 0.14 0.24 5.10 -2.91 -0.01 0.23 16 47 H 0.16 -0.81 4.90 -2.91 -0.01 -0.83 16 Total: 0.00 -24.03 417.12 -0.97 -25.00 By element: Atomic # 1 Polarization: -19.77 SS G_CDS: -0.98 Total: -20.75 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: 3.19 Total: 7.34 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -1.58 Total: -0.56 kcal Atomic # 8 Polarization: -6.20 SS G_CDS: -4.33 Total: -10.52 kcal Atomic # 9 Polarization: -1.18 SS G_CDS: 1.38 Total: 0.20 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: 2.04 Total: 0.18 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.69 Total: -0.89 kcal Total: -24.03 -0.97 -25.00 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_4549640.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.095 kcal (2) G-P(sol) polarization free energy of solvation -24.028 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.123 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.973 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.001 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.096 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds