Wall clock time and date at job start Sat Mar 6 2021 23:47:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47258 * 2 1 4 4 C 1.50697 * 109.47340 * 120.00475 * 2 1 3 5 5 C 1.38241 * 119.94270 * 64.99357 * 4 2 1 6 6 C 1.38236 * 120.04907 * 180.02562 * 5 4 2 7 7 Br 1.89094 * 120.04049 * 180.02562 * 6 5 4 8 8 C 1.38795 * 119.92662 * 359.97438 * 6 5 4 9 9 O 1.35911 * 120.05907 * 180.02562 * 8 6 5 10 10 C 1.42905 * 116.99890 * 180.02562 * 9 8 6 11 11 C 1.50698 * 109.47271 * 179.97438 * 10 9 8 12 12 O 1.21285 * 119.99702 * 359.72406 * 11 10 9 13 13 N 1.34769 * 120.00375 * 179.97438 * 11 10 9 14 14 C 1.46503 * 120.00439 * 174.62037 * 13 11 10 15 15 C 1.50692 * 112.85248 * 295.30996 * 14 13 11 16 16 C 1.38235 * 119.99305 * 164.00973 * 15 14 13 17 17 C 1.38221 * 120.01156 * 179.72637 * 16 15 14 18 18 C 1.38331 * 119.98869 * 0.54686 * 17 16 15 19 19 Br 1.89092 * 120.00901 * 179.70567 * 18 17 16 20 20 C 1.38324 * 119.97972 * 359.72770 * 18 17 16 21 21 C 1.38221 * 119.98663 * 359.97438 * 20 18 17 22 22 C 1.53785 * 113.61465 * 164.10761 * 14 13 11 23 23 C 1.53776 * 87.08278 * 270.88786 * 22 14 13 24 24 H 1.08997 * 113.61258 * 219.93533 * 23 22 14 25 25 O 1.42904 * 113.61559 * 89.11789 * 23 22 14 26 26 C 1.53782 * 113.60979 * 66.50314 * 14 13 11 27 27 C 1.38725 * 119.88083 * 0.27138 * 8 6 5 28 28 C 1.38146 * 119.94894 * 359.49593 * 27 8 6 29 29 H 0.96701 * 113.99540 * 300.00135 * 1 2 3 30 30 H 1.09007 * 109.47107 * 240.00026 * 2 1 3 31 31 H 1.48502 * 110.00155 * 178.68205 * 3 2 1 32 32 H 1.48501 * 110.00023 * 300.00168 * 3 2 1 33 33 H 1.08006 * 119.97893 * 0.02562 * 5 4 2 34 34 H 1.08999 * 109.47408 * 59.99242 * 10 9 8 35 35 H 1.09005 * 109.46852 * 299.99349 * 10 9 8 36 36 H 0.97008 * 120.00029 * 354.62683 * 13 11 10 37 37 H 1.08002 * 119.99587 * 359.97438 * 16 15 14 38 38 H 1.07998 * 120.00857 * 180.29408 * 17 16 15 39 39 H 1.07994 * 120.00644 * 179.97438 * 20 18 17 40 40 H 1.08007 * 119.99077 * 179.97438 * 21 20 18 41 41 H 1.08998 * 113.61086 * 25.44062 * 22 14 13 42 42 H 1.09002 * 113.61055 * 156.25278 * 22 14 13 43 43 H 0.96701 * 114.00285 * 180.02562 * 25 23 22 44 44 H 1.08996 * 113.61584 * 203.66355 * 26 14 13 45 45 H 1.08994 * 113.61775 * 334.56831 * 26 14 13 46 46 H 1.07995 * 120.02418 * 179.70910 * 27 8 6 47 47 H 1.08003 * 119.95890 * 180.20804 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6840 -2.0603 1.3970 6 6 2.1434 -2.7141 2.5250 7 35 1.8055 -4.5607 2.7524 8 6 2.8538 -2.0140 3.4901 9 8 3.3071 -2.6542 4.6000 10 6 4.0303 -1.8704 5.5512 11 6 4.4495 -2.7429 6.7062 12 8 4.1534 -3.9190 6.7163 13 7 5.1491 -2.2153 7.7301 14 6 5.4549 -3.0329 8.9067 15 6 4.2223 -3.4448 9.6695 16 6 4.2920 -4.4711 10.5930 17 6 3.1630 -4.8454 11.2971 18 6 1.9606 -4.2005 11.0692 19 35 0.4138 -4.7178 12.0260 20 6 1.8900 -3.1775 10.1409 21 6 3.0210 -2.7997 9.4419 22 6 6.5615 -2.4424 9.7965 23 6 7.5652 -3.2201 8.9290 24 1 8.3787 -3.6692 9.4989 25 8 8.0233 -2.4896 7.7894 26 6 6.4164 -4.1971 8.6147 27 6 3.0960 -0.6584 3.3223 28 6 2.6387 -0.0110 2.1908 29 1 -0.3932 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 3.5346 1.7703 0.0321 32 1 1.5615 2.4679 -1.2085 33 1 1.1314 -2.6046 0.6454 34 1 3.3938 -1.0648 5.9172 35 1 4.9150 -1.4469 5.0755 36 1 5.4501 -1.2941 7.6882 37 1 5.2297 -4.9778 10.7674 38 1 3.2185 -5.6440 12.0220 39 1 0.9515 -2.6740 9.9624 40 1 2.9659 -2.0012 8.7167 41 1 6.6583 -1.3600 9.7123 42 1 6.5192 -2.7845 10.8306 43 1 8.6546 -2.9736 7.2397 44 1 6.3354 -5.0191 9.3259 45 1 6.3962 -4.5303 7.5772 46 1 3.6445 -0.1103 4.0740 47 1 2.8301 1.0437 2.0584 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_6201210.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:47:01 Heat of formation + Delta-G solvation = -39.148211 kcal Electronic energy + Delta-G solvation = -35713.944539 eV Core-core repulsion = 30730.149563 eV Total energy + Delta-G solvation = -4983.794976 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 511.971 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -42.33252 -41.54796 -40.05099 -39.53362 -38.90443 -37.26555 -36.39418 -34.28398 -33.57986 -33.14632 -32.06571 -31.95171 -30.57477 -30.29301 -29.56580 -27.15387 -26.48334 -25.60201 -24.12882 -23.81047 -22.66672 -22.41235 -21.76531 -20.47059 -19.62549 -18.83942 -18.63153 -18.18913 -17.95650 -17.54085 -17.12469 -17.07301 -16.54556 -16.38945 -16.12105 -15.95914 -15.73321 -15.70569 -15.39470 -15.23449 -14.99015 -14.81399 -14.52629 -14.40315 -14.32566 -14.03434 -13.86570 -13.81543 -13.71295 -13.50719 -13.20087 -12.71460 -12.39558 -12.37146 -12.29310 -12.28841 -12.17976 -11.94065 -11.79733 -11.74239 -11.58379 -11.20663 -11.10558 -11.05581 -10.79813 -10.50307 -10.21363 -10.04074 -9.98777 -9.52968 -9.33842 -5.13445 -0.10120 0.02224 0.06094 0.28934 0.69342 0.72038 1.21208 1.26135 1.45918 1.54355 1.90480 2.33106 2.34098 2.49246 2.82402 3.26781 3.28867 3.36666 3.41190 3.48250 3.56452 3.58025 3.60630 3.65381 3.77951 3.79897 3.81549 3.86474 4.01611 4.14067 4.26715 4.27664 4.36149 4.43528 4.44276 4.51470 4.54829 4.59123 4.68273 4.75772 4.76008 4.88886 4.89969 4.92666 5.13832 5.15879 5.18632 5.24445 5.39046 5.54906 5.74369 5.95970 6.30072 6.46655 6.50934 7.07904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.064 4.064 3 Si 0.686 3.314 4 C -0.152 4.152 5 C -0.024 4.024 6 C -0.123 4.123 7 Br -0.025 7.025 8 C 0.161 3.839 9 O -0.273 6.273 10 C 0.037 3.963 11 C 0.517 3.483 12 O -0.494 6.494 13 N -0.699 5.699 14 C 0.200 3.800 15 C -0.058 4.058 16 C -0.106 4.106 17 C -0.086 4.086 18 C -0.090 4.090 19 Br -0.049 7.049 20 C -0.086 4.086 21 C -0.098 4.098 22 C -0.123 4.123 23 C 0.080 3.920 24 H 0.076 0.924 25 O -0.549 6.549 26 C -0.168 4.168 27 C -0.201 4.201 28 C -0.059 4.059 29 H 0.380 0.620 30 H 0.115 0.885 31 H -0.256 1.256 32 H -0.253 1.253 33 H 0.144 0.856 34 H 0.097 0.903 35 H 0.097 0.903 36 H 0.407 0.593 37 H 0.133 0.867 38 H 0.135 0.865 39 H 0.132 0.868 40 H 0.123 0.877 41 H 0.088 0.912 42 H 0.114 0.886 43 H 0.385 0.615 44 H 0.102 0.898 45 H 0.088 0.912 46 H 0.141 0.859 47 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.797 6.329 3.229 8.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.174 4.174 3 Si 0.588 3.412 4 C -0.154 4.154 5 C -0.044 4.044 6 C -0.203 4.203 7 Br 0.061 6.939 8 C 0.113 3.887 9 O -0.184 6.184 10 C -0.042 4.042 11 C 0.301 3.699 12 O -0.366 6.366 13 N -0.353 5.353 14 C 0.113 3.887 15 C -0.060 4.060 16 C -0.125 4.125 17 C -0.106 4.106 18 C -0.170 4.170 19 Br 0.036 6.964 20 C -0.106 4.106 21 C -0.117 4.117 22 C -0.160 4.160 23 C 0.020 3.980 24 H 0.094 0.906 25 O -0.355 6.355 26 C -0.207 4.207 27 C -0.220 4.220 28 C -0.077 4.077 29 H 0.227 0.773 30 H 0.133 0.867 31 H -0.181 1.181 32 H -0.177 1.177 33 H 0.161 0.839 34 H 0.114 0.886 35 H 0.115 0.885 36 H 0.243 0.757 37 H 0.151 0.849 38 H 0.153 0.847 39 H 0.150 0.850 40 H 0.141 0.859 41 H 0.107 0.893 42 H 0.132 0.868 43 H 0.233 0.767 44 H 0.120 0.880 45 H 0.106 0.894 46 H 0.159 0.841 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.999 5.097 2.990 7.135 hybrid contribution 1.019 0.118 -0.668 1.225 sum 5.018 5.215 2.322 7.601 Atomic orbital electron populations 1.86528 1.16933 1.81678 1.49245 1.25015 0.85378 1.09980 0.97071 0.94896 0.80951 0.77776 0.87594 1.20264 1.02524 0.94399 0.98215 1.20884 0.95206 0.93610 0.94664 1.21163 1.07916 0.93167 0.98092 1.96815 1.94719 1.04782 1.97601 1.18635 0.92999 0.90682 0.86421 1.86289 1.67953 1.36029 1.28122 1.22547 0.97906 0.94109 0.89634 1.19882 0.78628 0.88553 0.82806 1.90827 1.52656 1.15587 1.77507 1.45303 1.56945 1.16075 1.17020 1.19832 0.90620 0.93118 0.85117 1.19862 0.94511 0.95693 0.95939 1.20917 0.98651 0.96710 0.96229 1.21100 0.91015 0.99135 0.99347 1.21843 0.93105 1.01074 1.00964 1.96775 1.34655 1.91385 1.73570 1.21104 0.99258 0.95640 0.94581 1.20865 0.91757 0.99965 0.99078 1.23431 0.92145 1.01991 0.98479 1.22751 0.94806 0.92561 0.87845 0.90617 1.86392 1.65394 1.44506 1.39215 1.24175 0.95015 0.96895 1.04575 1.21172 1.06926 0.92851 1.01054 1.20908 0.95009 0.99335 0.92446 0.77309 0.86730 1.18123 1.17749 0.83867 0.88555 0.88489 0.75695 0.84885 0.84722 0.84974 0.85883 0.89321 0.86803 0.76708 0.87985 0.89367 0.84124 0.84623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.19 12.83 -35.23 -0.45 -0.26 16 2 C -0.06 0.06 2.80 36.00 0.10 0.16 16 3 Si 0.69 -1.42 29.80 -169.99 -5.07 -6.49 16 4 C -0.15 0.08 5.35 -104.61 -0.56 -0.48 16 5 C -0.02 -0.03 9.42 -39.58 -0.37 -0.40 16 6 C -0.12 -0.29 6.24 -39.38 -0.25 -0.54 16 7 Br -0.02 -0.09 33.16 -68.01 -2.26 -2.35 16 8 C 0.16 0.21 6.68 -39.20 -0.26 -0.05 16 9 O -0.27 -0.59 9.00 -39.37 -0.35 -0.94 16 10 C 0.04 -0.06 5.22 36.00 0.19 0.12 16 11 C 0.52 0.25 6.29 -10.99 -0.07 0.18 16 12 O -0.49 -2.55 14.99 -14.36 -0.22 -2.77 16 13 N -0.70 1.45 3.84 -47.92 -0.18 1.27 16 14 C 0.20 -0.29 0.93 -132.16 -0.12 -0.41 16 15 C -0.06 -0.01 4.69 -104.62 -0.49 -0.50 16 16 C -0.11 0.01 8.86 -39.59 -0.35 -0.34 16 17 C -0.09 -0.07 9.79 -39.55 -0.39 -0.46 16 18 C -0.09 -0.17 6.22 -39.52 -0.25 -0.41 16 19 Br -0.05 -0.10 33.70 -68.01 -2.29 -2.39 16 20 C -0.09 -0.13 9.79 -39.56 -0.39 -0.51 16 21 C -0.10 -0.08 8.80 -39.59 -0.35 -0.43 16 22 C -0.12 0.40 7.12 -25.92 -0.18 0.21 16 23 C 0.08 -0.23 5.28 -25.78 -0.14 -0.37 16 24 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 25 O -0.55 1.36 13.09 -35.23 -0.46 0.90 16 26 C -0.17 0.21 6.62 -25.77 -0.17 0.04 16 27 C -0.20 0.30 9.04 -39.44 -0.36 -0.05 16 28 C -0.06 0.11 8.66 -39.60 -0.34 -0.23 16 29 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 30 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H -0.26 -0.03 7.11 56.52 0.40 0.38 16 32 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 33 H 0.14 0.11 8.06 -52.48 -0.42 -0.32 16 34 H 0.10 -0.44 7.65 -51.93 -0.40 -0.84 16 35 H 0.10 -0.40 7.67 -51.93 -0.40 -0.80 16 36 H 0.41 -1.83 8.66 -40.82 -0.35 -2.18 16 37 H 0.13 -0.32 6.38 -52.49 -0.33 -0.66 16 38 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 39 H 0.13 0.05 8.06 -52.49 -0.42 -0.37 16 40 H 0.12 -0.06 6.73 -52.48 -0.35 -0.41 16 41 H 0.09 -0.31 8.09 -51.93 -0.42 -0.73 16 42 H 0.11 -0.48 7.88 -51.93 -0.41 -0.89 16 43 H 0.38 -2.02 9.12 45.56 0.42 -1.60 16 44 H 0.10 -0.21 6.09 -51.93 -0.32 -0.53 16 45 H 0.09 0.11 7.30 -51.93 -0.38 -0.27 16 46 H 0.14 -0.64 6.30 -52.49 -0.33 -0.97 16 47 H 0.14 -0.59 4.90 -52.48 -0.26 -0.84 16 LS Contribution 428.18 15.07 6.45 6.45 Total: 0.00 -10.95 428.18 -14.01 -24.96 By element: Atomic # 1 Polarization: -9.47 SS G_CDS: -4.44 Total: -13.91 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -4.74 Total: -4.47 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.18 Total: 1.27 kcal Atomic # 8 Polarization: -1.60 SS G_CDS: -1.48 Total: -3.08 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.07 Total: -6.49 kcal Atomic # 35 Polarization: -0.19 SS G_CDS: -4.55 Total: -4.74 kcal Total LS contribution 6.45 Total: 6.45 kcal Total: -10.95 -14.01 -24.96 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_6201210.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.185 kcal (2) G-P(sol) polarization free energy of solvation -10.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.138 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.148 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds