Wall clock time and date at job start Sat Mar 6 2021 23:46:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47258 * 2 1 4 4 C 1.50697 * 109.47340 * 120.00475 * 2 1 3 5 5 C 1.38241 * 119.94270 * 64.99357 * 4 2 1 6 6 C 1.38236 * 120.04907 * 180.02562 * 5 4 2 7 7 Br 1.89094 * 120.04049 * 180.02562 * 6 5 4 8 8 C 1.38795 * 119.92662 * 359.97438 * 6 5 4 9 9 O 1.35911 * 120.05907 * 180.02562 * 8 6 5 10 10 C 1.42905 * 116.99890 * 180.02562 * 9 8 6 11 11 C 1.50698 * 109.47271 * 179.97438 * 10 9 8 12 12 O 1.21285 * 119.99702 * 359.72406 * 11 10 9 13 13 N 1.34769 * 120.00375 * 179.97438 * 11 10 9 14 14 C 1.46503 * 120.00439 * 174.62037 * 13 11 10 15 15 C 1.50692 * 112.85248 * 295.30996 * 14 13 11 16 16 C 1.38235 * 119.99305 * 164.00973 * 15 14 13 17 17 C 1.38221 * 120.01156 * 179.72637 * 16 15 14 18 18 C 1.38331 * 119.98869 * 0.54686 * 17 16 15 19 19 Br 1.89092 * 120.00901 * 179.70567 * 18 17 16 20 20 C 1.38324 * 119.97972 * 359.72770 * 18 17 16 21 21 C 1.38221 * 119.98663 * 359.97438 * 20 18 17 22 22 C 1.53785 * 113.61465 * 164.10761 * 14 13 11 23 23 C 1.53776 * 87.08278 * 270.88786 * 22 14 13 24 24 H 1.08997 * 113.61258 * 219.93533 * 23 22 14 25 25 O 1.42904 * 113.61559 * 89.11789 * 23 22 14 26 26 C 1.53782 * 113.60979 * 66.50314 * 14 13 11 27 27 C 1.38725 * 119.88083 * 0.27138 * 8 6 5 28 28 C 1.38146 * 119.94894 * 359.49593 * 27 8 6 29 29 H 0.96701 * 113.99540 * 300.00135 * 1 2 3 30 30 H 1.09007 * 109.47107 * 240.00026 * 2 1 3 31 31 H 1.48502 * 110.00155 * 178.68205 * 3 2 1 32 32 H 1.48501 * 110.00023 * 300.00168 * 3 2 1 33 33 H 1.08006 * 119.97893 * 0.02562 * 5 4 2 34 34 H 1.08999 * 109.47408 * 59.99242 * 10 9 8 35 35 H 1.09005 * 109.46852 * 299.99349 * 10 9 8 36 36 H 0.97008 * 120.00029 * 354.62683 * 13 11 10 37 37 H 1.08002 * 119.99587 * 359.97438 * 16 15 14 38 38 H 1.07998 * 120.00857 * 180.29408 * 17 16 15 39 39 H 1.07994 * 120.00644 * 179.97438 * 20 18 17 40 40 H 1.08007 * 119.99077 * 179.97438 * 21 20 18 41 41 H 1.08998 * 113.61086 * 25.44062 * 22 14 13 42 42 H 1.09002 * 113.61055 * 156.25278 * 22 14 13 43 43 H 0.96701 * 114.00285 * 180.02562 * 25 23 22 44 44 H 1.08996 * 113.61584 * 203.66355 * 26 14 13 45 45 H 1.08994 * 113.61775 * 334.56831 * 26 14 13 46 46 H 1.07995 * 120.02418 * 179.70910 * 27 8 6 47 47 H 1.08003 * 119.95890 * 180.20804 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6840 -2.0603 1.3970 6 6 2.1434 -2.7141 2.5250 7 35 1.8055 -4.5607 2.7524 8 6 2.8538 -2.0140 3.4901 9 8 3.3071 -2.6542 4.6000 10 6 4.0303 -1.8704 5.5512 11 6 4.4495 -2.7429 6.7062 12 8 4.1534 -3.9190 6.7163 13 7 5.1491 -2.2153 7.7301 14 6 5.4549 -3.0329 8.9067 15 6 4.2223 -3.4448 9.6695 16 6 4.2920 -4.4711 10.5930 17 6 3.1630 -4.8454 11.2971 18 6 1.9606 -4.2005 11.0692 19 35 0.4138 -4.7178 12.0260 20 6 1.8900 -3.1775 10.1409 21 6 3.0210 -2.7997 9.4419 22 6 6.5615 -2.4424 9.7965 23 6 7.5652 -3.2201 8.9290 24 1 8.3787 -3.6692 9.4989 25 8 8.0233 -2.4896 7.7894 26 6 6.4164 -4.1971 8.6147 27 6 3.0960 -0.6584 3.3223 28 6 2.6387 -0.0110 2.1908 29 1 -0.3932 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 3.5346 1.7703 0.0321 32 1 1.5615 2.4679 -1.2085 33 1 1.1314 -2.6046 0.6454 34 1 3.3938 -1.0648 5.9172 35 1 4.9150 -1.4469 5.0755 36 1 5.4501 -1.2941 7.6882 37 1 5.2297 -4.9778 10.7674 38 1 3.2185 -5.6440 12.0220 39 1 0.9515 -2.6740 9.9624 40 1 2.9659 -2.0012 8.7167 41 1 6.6583 -1.3600 9.7123 42 1 6.5192 -2.7845 10.8306 43 1 8.6546 -2.9736 7.2397 44 1 6.3354 -5.0191 9.3259 45 1 6.3962 -4.5303 7.5772 46 1 3.6445 -0.1103 4.0740 47 1 2.8301 1.0437 2.0584 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_6201210.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:46:59 Heat of formation + Delta-G solvation = -40.101218 kcal Electronic energy + Delta-G solvation = -35713.985865 eV Core-core repulsion = 30730.149563 eV Total energy + Delta-G solvation = -4983.836302 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 511.971 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -42.23422 -41.49026 -40.04086 -39.45762 -38.86917 -37.21058 -36.23607 -34.22141 -33.59412 -33.16783 -32.05079 -31.90283 -30.58964 -30.33755 -29.48828 -26.96025 -26.41601 -25.48840 -24.08053 -23.79965 -22.63263 -22.34739 -21.65934 -20.35798 -19.54552 -18.69209 -18.57137 -18.11241 -17.80778 -17.44438 -17.06410 -17.00989 -16.49748 -16.33037 -16.08320 -15.90460 -15.67589 -15.66325 -15.27368 -15.21837 -14.91354 -14.71505 -14.50633 -14.43404 -14.30995 -13.94948 -13.79577 -13.70648 -13.60108 -13.36238 -13.11858 -12.62281 -12.36466 -12.31141 -12.27970 -12.18220 -12.13383 -11.91792 -11.85076 -11.63780 -11.51996 -11.32257 -11.24527 -11.01328 -10.73027 -10.42969 -10.12926 -10.06141 -9.98808 -9.56000 -9.33255 -4.98365 -0.06535 -0.00363 0.10743 0.26901 0.60391 0.62893 1.33202 1.37995 1.50328 1.66652 2.01667 2.38600 2.45618 2.49949 3.10643 3.42193 3.46813 3.48514 3.53795 3.62629 3.66562 3.74739 3.76730 3.83009 3.87628 3.91299 4.02031 4.07454 4.10854 4.25861 4.31729 4.37519 4.41350 4.50243 4.60557 4.63079 4.68844 4.80351 4.83610 4.85258 4.88989 4.99223 5.00710 5.02395 5.14264 5.16723 5.22556 5.30529 5.46954 5.62085 5.75146 6.05674 6.47369 6.78983 6.83704 7.18440 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.076 4.076 3 Si 0.788 3.212 4 C -0.153 4.153 5 C -0.036 4.036 6 C -0.145 4.145 7 Br -0.055 7.055 8 C 0.150 3.850 9 O -0.303 6.303 10 C 0.031 3.969 11 C 0.515 3.485 12 O -0.550 6.550 13 N -0.684 5.684 14 C 0.193 3.807 15 C -0.062 4.062 16 C -0.109 4.109 17 C -0.095 4.095 18 C -0.107 4.107 19 Br -0.059 7.059 20 C -0.099 4.099 21 C -0.108 4.108 22 C -0.114 4.114 23 C 0.087 3.913 24 H 0.092 0.908 25 O -0.561 6.561 26 C -0.172 4.172 27 C -0.190 4.190 28 C -0.052 4.052 29 H 0.396 0.604 30 H 0.104 0.896 31 H -0.277 1.277 32 H -0.304 1.304 33 H 0.135 0.865 34 H 0.130 0.870 35 H 0.126 0.874 36 H 0.421 0.579 37 H 0.155 0.845 38 H 0.145 0.855 39 H 0.136 0.864 40 H 0.133 0.867 41 H 0.096 0.904 42 H 0.126 0.874 43 H 0.395 0.605 44 H 0.107 0.893 45 H 0.059 0.941 46 H 0.179 0.821 47 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.569 9.014 4.111 11.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.185 4.185 3 Si 0.693 3.307 4 C -0.154 4.154 5 C -0.056 4.056 6 C -0.225 4.225 7 Br 0.030 6.970 8 C 0.101 3.899 9 O -0.215 6.215 10 C -0.047 4.047 11 C 0.301 3.699 12 O -0.426 6.426 13 N -0.338 5.338 14 C 0.106 3.894 15 C -0.063 4.063 16 C -0.128 4.128 17 C -0.115 4.115 18 C -0.186 4.186 19 Br 0.027 6.973 20 C -0.119 4.119 21 C -0.126 4.126 22 C -0.151 4.151 23 C 0.028 3.972 24 H 0.109 0.891 25 O -0.368 6.368 26 C -0.211 4.211 27 C -0.208 4.208 28 C -0.070 4.070 29 H 0.246 0.754 30 H 0.121 0.879 31 H -0.203 1.203 32 H -0.233 1.233 33 H 0.152 0.848 34 H 0.148 0.852 35 H 0.144 0.856 36 H 0.260 0.740 37 H 0.173 0.827 38 H 0.162 0.838 39 H 0.154 0.846 40 H 0.151 0.849 41 H 0.115 0.885 42 H 0.144 0.856 43 H 0.245 0.755 44 H 0.125 0.875 45 H 0.078 0.922 46 H 0.196 0.804 47 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 5.783 7.802 3.905 10.467 hybrid contribution 0.488 -0.686 -1.017 1.320 sum 6.271 7.116 2.888 9.915 Atomic orbital electron populations 1.86491 1.17361 1.82237 1.50502 1.25279 0.85280 1.11369 0.96557 0.93801 0.77831 0.74050 0.85034 1.20368 1.02622 0.93695 0.98755 1.20878 0.95821 0.94521 0.94393 1.21272 1.09839 0.91885 0.99506 1.96760 1.94974 1.07574 1.97716 1.18804 0.93204 0.91747 0.86102 1.86251 1.68586 1.37791 1.28862 1.22846 0.99460 0.93821 0.88524 1.20358 0.77941 0.88088 0.83499 1.90808 1.55001 1.18012 1.78789 1.45205 1.55831 1.16575 1.16186 1.19973 0.90263 0.93641 0.85543 1.20131 0.94981 0.95440 0.95790 1.21204 0.99265 0.96582 0.95770 1.21318 0.91020 0.99380 0.99771 1.21965 0.93239 1.01828 1.01587 1.96745 1.35311 1.91483 1.73779 1.21249 0.99830 0.95922 0.94908 1.21053 0.91859 1.00502 0.99235 1.23452 0.90551 1.02414 0.98682 1.22750 0.94798 0.91881 0.87814 0.89052 1.86351 1.65843 1.45024 1.39608 1.24205 0.96446 0.97509 1.02940 1.21571 1.05997 0.91560 1.01718 1.21252 0.93535 1.00639 0.91559 0.75414 0.87868 1.20302 1.23269 0.84759 0.85215 0.85593 0.74027 0.82722 0.83769 0.84635 0.84903 0.88503 0.85563 0.75456 0.87489 0.92226 0.80354 0.81552 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.35 12.83 -148.98 -1.91 -1.56 16 2 C -0.08 0.17 2.80 71.24 0.20 0.37 16 3 Si 0.79 -4.33 29.80 68.60 2.04 -2.29 16 4 C -0.15 0.24 5.35 -19.86 -0.11 0.14 16 5 C -0.04 -0.12 9.42 22.27 0.21 0.09 16 6 C -0.15 -0.86 6.24 22.40 0.14 -0.72 16 7 Br -0.06 -0.56 33.16 -20.37 -0.68 -1.23 16 8 C 0.15 0.33 6.68 22.52 0.15 0.48 16 9 O -0.30 -1.34 9.00 -73.51 -0.66 -2.00 16 10 C 0.03 -0.16 5.22 71.24 0.37 0.22 16 11 C 0.52 0.41 6.29 87.66 0.55 0.97 16 12 O -0.55 -6.52 14.99 15.99 0.24 -6.28 16 13 N -0.68 3.51 3.84 -423.93 -1.63 1.88 16 14 C 0.19 -0.68 0.93 3.38 0.00 -0.67 16 15 C -0.06 -0.02 4.69 -19.87 -0.09 -0.12 16 16 C -0.11 0.03 8.86 22.27 0.20 0.22 16 17 C -0.10 -0.21 9.79 22.29 0.22 0.01 16 18 C -0.11 -0.50 6.22 22.31 0.14 -0.36 16 19 Br -0.06 -0.30 33.70 -20.37 -0.69 -0.98 16 20 C -0.10 -0.39 9.79 22.29 0.22 -0.17 16 21 C -0.11 -0.22 8.80 22.27 0.20 -0.02 16 22 C -0.11 0.93 7.12 31.12 0.22 1.16 16 23 C 0.09 -0.63 5.28 31.21 0.16 -0.47 16 24 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 25 O -0.56 3.57 13.09 -148.98 -1.95 1.62 16 26 C -0.17 0.44 6.62 31.21 0.21 0.65 16 27 C -0.19 1.06 9.04 22.36 0.20 1.26 16 28 C -0.05 0.32 8.66 22.26 0.19 0.51 16 29 H 0.40 -3.57 8.70 -74.06 -0.64 -4.22 16 30 H 0.10 -0.03 7.96 -2.38 -0.02 -0.05 16 31 H -0.28 0.54 7.11 99.48 0.71 1.25 16 32 H -0.30 -0.98 7.11 99.48 0.71 -0.27 16 33 H 0.13 0.52 8.06 -2.91 -0.02 0.50 16 34 H 0.13 -1.57 7.65 -2.39 -0.02 -1.59 16 35 H 0.13 -1.40 7.67 -2.38 -0.02 -1.42 16 36 H 0.42 -4.64 8.66 -92.70 -0.80 -5.44 16 37 H 0.16 -0.85 6.38 -2.91 -0.02 -0.87 16 38 H 0.14 -0.10 8.06 -2.91 -0.02 -0.12 16 39 H 0.14 0.27 8.06 -2.91 -0.02 0.25 16 40 H 0.13 -0.14 6.73 -2.91 -0.02 -0.16 16 41 H 0.10 -0.91 8.09 -2.39 -0.02 -0.93 16 42 H 0.13 -1.33 7.88 -2.39 -0.02 -1.35 16 43 H 0.40 -4.53 9.12 -74.06 -0.68 -5.20 16 44 H 0.11 -0.46 6.09 -2.39 -0.01 -0.47 16 45 H 0.06 0.22 7.30 -2.39 -0.02 0.21 16 46 H 0.18 -2.45 6.30 -2.91 -0.02 -2.47 16 47 H 0.17 -2.09 4.90 -2.91 -0.01 -2.10 16 Total: 0.00 -29.88 428.18 -2.84 -32.72 By element: Atomic # 1 Polarization: -24.42 SS G_CDS: -0.99 Total: -25.42 kcal Atomic # 6 Polarization: 0.16 SS G_CDS: 3.38 Total: 3.54 kcal Atomic # 7 Polarization: 3.51 SS G_CDS: -1.63 Total: 1.88 kcal Atomic # 8 Polarization: -3.94 SS G_CDS: -4.28 Total: -8.23 kcal Atomic # 14 Polarization: -4.33 SS G_CDS: 2.04 Total: -2.29 kcal Atomic # 35 Polarization: -0.85 SS G_CDS: -1.36 Total: -2.22 kcal Total: -29.88 -2.84 -32.72 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_6201210.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.377 kcal (2) G-P(sol) polarization free energy of solvation -29.883 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.841 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.724 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds