Wall clock time and date at job start Sat Mar 6 2021 23:47:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.47001 * 2 1 4 4 C 1.50697 * 109.47000 * 119.99798 * 2 1 3 5 5 C 1.35452 * 125.56938 * 244.97692 * 4 2 1 6 6 C 1.39831 * 107.86855 * 180.02562 * 5 4 2 7 7 C 1.37870 * 107.08565 * 359.97438 * 6 5 4 8 8 C 1.46682 * 126.23673 * 179.97438 * 7 6 5 9 9 O 1.21700 * 119.99640 * 0.02562 * 8 7 6 10 10 N 1.34778 * 120.00239 * 180.02562 * 8 7 6 11 11 C 1.46496 * 119.99893 * 174.89813 * 10 8 7 12 12 C 1.50700 * 112.85128 * 295.31161 * 11 10 8 13 13 C 1.38243 * 119.98849 * 164.00581 * 12 11 10 14 14 C 1.38222 * 120.00561 * 179.76246 * 13 12 11 15 15 C 1.38325 * 119.99080 * 0.51047 * 14 13 12 16 16 Br 1.89102 * 120.00873 * 179.76651 * 15 14 13 17 17 C 1.38325 * 119.97957 * 359.74711 * 15 14 13 18 18 C 1.38221 * 119.99192 * 359.97438 * 17 15 14 19 19 C 1.53781 * 113.61524 * 164.10955 * 11 10 8 20 20 C 1.54049 * 86.98767 * 270.84396 * 19 11 10 21 21 H 1.08997 * 113.69295 * 220.01305 * 20 19 11 22 22 O 1.42895 * 113.61695 * 89.11074 * 20 19 11 23 23 C 1.53781 * 87.07441 * 334.56516 * 20 19 11 24 24 N 1.35537 * 125.56062 * 65.00115 * 4 2 1 25 25 H 0.96704 * 114.00127 * 59.99861 * 1 2 3 26 26 H 1.08998 * 109.47124 * 240.00424 * 2 1 3 27 27 H 1.48494 * 110.00265 * 298.67866 * 3 2 1 28 28 H 1.48503 * 110.00123 * 60.00253 * 3 2 1 29 29 H 1.08000 * 126.06484 * 359.97438 * 5 4 2 30 30 H 1.08002 * 126.45972 * 179.73955 * 6 5 4 31 31 H 0.97001 * 119.99783 * 354.89847 * 10 8 7 32 32 H 1.07997 * 119.99571 * 0.02562 * 13 12 11 33 33 H 1.08003 * 120.00512 * 180.27880 * 14 13 12 34 34 H 1.07997 * 120.00349 * 180.02562 * 17 15 14 35 35 H 1.07995 * 119.99765 * 180.02562 * 18 17 15 36 36 H 1.09004 * 113.61150 * 25.43869 * 19 11 10 37 37 H 1.08997 * 113.61734 * 156.33187 * 19 11 10 38 38 H 0.96706 * 113.99675 * 82.51154 * 22 20 19 39 39 H 1.09005 * 113.61708 * 270.87972 * 23 20 19 40 40 H 1.09004 * 113.61029 * 139.97995 * 23 20 19 41 41 H 0.97000 * 125.67937 * 359.95553 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6333 -0.1395 2.2384 6 6 2.9083 -1.1311 3.1851 7 6 2.3534 -2.3032 2.7169 8 6 2.3946 -3.6090 3.3837 9 8 2.9589 -3.7274 4.4554 10 7 1.8075 -4.6777 2.8095 11 6 1.9436 -6.0033 3.4182 12 6 3.3649 -6.5043 3.4177 13 6 3.7248 -7.5626 4.2311 14 6 5.0271 -8.0256 4.2272 15 6 5.9728 -7.4231 3.4173 16 35 7.7562 -8.0519 3.4166 17 6 5.6134 -6.3607 2.6076 18 6 4.3095 -5.9021 2.6077 19 6 0.9281 -7.0306 2.8909 20 6 -0.0142 -6.5536 4.0124 21 1 -0.5680 -7.3606 4.4920 22 8 -0.8486 -5.4578 3.6316 23 6 1.2468 -6.1288 4.7833 24 7 1.7547 -2.0250 1.5090 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 1.5879 2.4586 -1.2242 28 1 1.5615 2.4679 1.2085 29 1 2.9290 0.8975 2.2996 30 1 3.4558 -1.0039 4.1074 31 1 1.2948 -4.5692 1.9933 32 1 2.9873 -8.0304 4.8664 33 1 5.3072 -8.8554 4.8594 34 1 6.3513 -5.8903 1.9747 35 1 4.0288 -5.0729 1.9753 36 1 0.5631 -6.8085 1.8881 37 1 1.2538 -8.0645 3.0045 38 1 -1.6434 -5.7188 3.1464 39 1 1.6595 -6.9167 5.4135 40 1 1.1388 -5.1791 5.3074 41 1 1.2843 -2.6634 0.9504 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_6580494.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:47:09 Heat of formation + Delta-G solvation = 2.890189 kcal Electronic energy + Delta-G solvation = -28478.359392 eV Core-core repulsion = 24373.225381 eV Total energy + Delta-G solvation = -4105.134011 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.041 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.66052 -41.89335 -39.76450 -39.27361 -37.81040 -36.33564 -34.32329 -33.18313 -32.22426 -31.96830 -31.41352 -30.31963 -27.21801 -26.95256 -25.45772 -23.95947 -23.33775 -22.34975 -21.62000 -21.14713 -20.30693 -19.70224 -18.67864 -18.63527 -17.87372 -17.13314 -16.90239 -16.42257 -16.32763 -16.00825 -15.93654 -15.46695 -15.43502 -14.97436 -14.83863 -14.66956 -14.58848 -14.33996 -14.11078 -13.91896 -13.71330 -13.53882 -13.37004 -13.06118 -12.72023 -12.63837 -12.43607 -12.27473 -12.01715 -11.72289 -11.54923 -11.31485 -11.11316 -10.99419 -10.63365 -10.21966 -10.08901 -10.07384 -9.57895 -9.28084 -4.84317 -0.01631 0.25558 0.29922 0.59900 1.20891 1.52246 1.64645 1.86890 1.98503 2.16662 2.27922 2.47853 3.08688 3.27234 3.39981 3.47855 3.60459 3.69083 3.71034 3.79646 3.86868 3.92634 4.18943 4.23927 4.26153 4.34542 4.38202 4.46508 4.57854 4.65748 4.77520 4.79543 4.84663 4.93300 4.95094 4.99795 5.08181 5.13134 5.15621 5.27392 5.54696 5.61206 5.73501 5.76794 6.26593 6.44521 6.53960 6.87140 7.06885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.064 4.064 3 Si 0.786 3.214 4 C 0.069 3.931 5 C -0.208 4.208 6 C -0.120 4.120 7 C -0.061 4.061 8 C 0.594 3.406 9 O -0.555 6.555 10 N -0.689 5.689 11 C 0.189 3.811 12 C -0.061 4.061 13 C -0.108 4.108 14 C -0.092 4.092 15 C -0.105 4.105 16 Br -0.056 7.056 17 C -0.097 4.097 18 C -0.109 4.109 19 C -0.145 4.145 20 C 0.085 3.915 21 H 0.096 0.904 22 O -0.567 6.567 23 C -0.141 4.141 24 N -0.511 5.511 25 H 0.401 0.599 26 H 0.107 0.893 27 H -0.278 1.278 28 H -0.301 1.301 29 H 0.163 0.837 30 H 0.144 0.856 31 H 0.409 0.591 32 H 0.158 0.842 33 H 0.148 0.852 34 H 0.136 0.864 35 H 0.124 0.876 36 H 0.097 0.903 37 H 0.125 0.875 38 H 0.398 0.602 39 H 0.121 0.879 40 H 0.053 0.947 41 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.835 -2.542 -7.018 8.392 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.173 4.173 3 Si 0.689 3.311 4 C -0.049 4.049 5 C -0.232 4.232 6 C -0.146 4.146 7 C -0.175 4.175 8 C 0.382 3.618 9 O -0.433 6.433 10 N -0.340 5.340 11 C 0.102 3.898 12 C -0.062 4.062 13 C -0.127 4.127 14 C -0.112 4.112 15 C -0.185 4.185 16 Br 0.030 6.970 17 C -0.117 4.117 18 C -0.128 4.128 19 C -0.183 4.183 20 C 0.026 3.974 21 H 0.114 0.886 22 O -0.376 6.376 23 C -0.179 4.179 24 N -0.108 5.108 25 H 0.252 0.748 26 H 0.125 0.875 27 H -0.205 1.205 28 H -0.228 1.228 29 H 0.180 0.820 30 H 0.162 0.838 31 H 0.246 0.754 32 H 0.175 0.825 33 H 0.166 0.834 34 H 0.154 0.846 35 H 0.142 0.858 36 H 0.115 0.885 37 H 0.143 0.857 38 H 0.248 0.752 39 H 0.139 0.861 40 H 0.072 0.928 41 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -2.504 -2.179 -5.514 6.436 hybrid contribution -2.090 -0.225 -1.107 2.375 sum -4.594 -2.403 -6.621 8.409 Atomic orbital electron populations 1.86541 1.18084 1.80960 1.51568 1.24719 0.84401 1.12114 0.96059 0.93436 0.90357 0.70613 0.76683 1.20176 1.02689 0.83747 0.98335 1.20875 1.06919 1.00619 0.94812 1.21430 1.01742 0.91008 1.00467 1.20339 1.10621 0.95582 0.90972 1.17108 0.78007 0.82568 0.84094 1.90856 1.45745 1.84774 1.21889 1.45245 1.53747 1.05805 1.29172 1.20050 0.90522 0.83156 0.96093 1.20077 0.95128 0.95387 0.95645 1.21204 0.96278 0.96514 0.98661 1.21336 0.92493 0.99821 0.97557 1.21956 0.91850 1.01064 1.03580 1.96746 1.13932 1.87880 1.98467 1.21218 0.97074 0.95214 0.98205 1.20989 0.92482 0.99668 0.99655 1.24072 0.94302 0.99114 1.00770 1.22771 0.90597 0.89120 0.94897 0.88605 1.86497 1.38944 1.33911 1.78203 1.23630 0.95207 1.03030 0.96015 1.41845 1.42445 1.09573 1.16939 0.74771 0.87542 1.20483 1.22791 0.81977 0.83773 0.75418 0.82474 0.83423 0.84632 0.85807 0.88465 0.85734 0.75204 0.86103 0.92796 0.73337 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.03 12.86 -148.98 -1.92 -0.89 16 2 C -0.06 0.27 3.07 71.23 0.22 0.49 16 3 Si 0.79 -3.34 30.56 68.60 2.10 -1.24 16 4 C 0.07 0.06 6.50 41.34 0.27 0.33 16 5 C -0.21 -0.69 9.32 22.01 0.21 -0.48 16 6 C -0.12 -0.87 10.65 22.57 0.24 -0.63 16 7 C -0.06 -0.35 7.05 40.35 0.28 -0.07 16 8 C 0.59 4.48 6.17 86.45 0.53 5.01 16 9 O -0.55 -8.60 15.38 -4.35 -0.07 -8.67 16 10 N -0.69 -0.22 3.84 -427.83 -1.64 -1.86 16 11 C 0.19 -0.12 0.92 3.38 0.00 -0.11 16 12 C -0.06 -0.13 4.69 -19.86 -0.09 -0.22 16 13 C -0.11 -0.03 8.86 22.27 0.20 0.16 16 14 C -0.09 -0.20 9.79 22.29 0.22 0.02 16 15 C -0.11 -0.51 6.22 22.31 0.14 -0.37 16 16 Br -0.06 -0.27 33.70 -20.37 -0.69 -0.95 16 17 C -0.10 -0.47 9.79 22.29 0.22 -0.26 16 18 C -0.11 -0.45 8.80 22.27 0.20 -0.26 16 19 C -0.14 1.07 7.14 31.21 0.22 1.29 16 20 C 0.09 -0.42 5.28 31.21 0.16 -0.25 16 21 H 0.10 -0.83 8.14 -2.39 -0.02 -0.84 16 22 O -0.57 1.48 13.09 -148.98 -1.95 -0.47 16 23 C -0.14 -0.12 6.60 31.12 0.21 0.08 16 24 N -0.51 -0.01 5.99 -171.93 -1.03 -1.04 16 25 H 0.40 -4.01 8.74 -74.05 -0.65 -4.65 16 26 H 0.11 -1.03 7.96 -2.39 -0.02 -1.05 16 27 H -0.28 0.29 7.11 99.48 0.71 1.00 16 28 H -0.30 -1.30 7.11 99.48 0.71 -0.59 16 29 H 0.16 -0.06 6.19 -2.91 -0.02 -0.08 16 30 H 0.14 1.13 8.06 -2.91 -0.02 1.11 16 31 H 0.41 -1.99 7.80 -92.71 -0.72 -2.72 16 32 H 0.16 -0.84 6.38 -2.91 -0.02 -0.86 16 33 H 0.15 -0.17 8.06 -2.91 -0.02 -0.19 16 34 H 0.14 0.40 8.06 -2.91 -0.02 0.38 16 35 H 0.12 0.39 6.74 -2.91 -0.02 0.37 16 36 H 0.10 -0.96 8.09 -2.38 -0.02 -0.98 16 37 H 0.12 -1.25 7.88 -2.39 -0.02 -1.27 16 38 H 0.40 -4.43 9.12 -74.05 -0.68 -5.11 16 39 H 0.12 -0.33 6.09 -2.38 -0.01 -0.35 16 40 H 0.05 0.50 7.30 -2.38 -0.02 0.48 16 41 H 0.43 -2.42 8.20 -92.71 -0.76 -3.18 16 Total: 0.00 -25.33 363.29 -3.60 -28.93 By element: Atomic # 1 Polarization: -16.90 SS G_CDS: -1.63 Total: -18.53 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: 3.22 Total: 4.73 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -2.67 Total: -2.90 kcal Atomic # 8 Polarization: -6.10 SS G_CDS: -3.93 Total: -10.03 kcal Atomic # 14 Polarization: -3.34 SS G_CDS: 2.10 Total: -1.24 kcal Atomic # 35 Polarization: -0.27 SS G_CDS: -0.69 Total: -0.95 kcal Total: -25.33 -3.60 -28.93 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_6580494.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.816 kcal (2) G-P(sol) polarization free energy of solvation -25.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.926 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds