Wall clock time and date at job start Sat Mar 6 2021 23:47:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33811 * 122.44820 * 2 1 4 4 C 1.50697 * 124.52593 * 359.95926 * 3 2 1 5 5 O 1.42898 * 109.47253 * 42.52902 * 4 3 2 6 6 Si 1.86298 * 109.47127 * 162.53044 * 4 3 2 7 7 S 1.70622 * 110.95256 * 179.97438 * 3 2 1 8 8 C 1.75830 * 91.56140 * 0.02562 * 7 3 2 9 9 C 1.46590 * 125.45769 * 179.97438 * 8 7 3 10 10 O 1.21702 * 119.99956 * 180.02562 * 9 8 7 11 11 N 1.34778 * 119.99816 * 0.02562 * 9 8 7 12 12 C 1.46495 * 119.99826 * 185.16376 * 11 9 8 13 13 C 1.50699 * 112.85045 * 283.64020 * 12 11 9 14 14 C 1.38242 * 119.98792 * 2.26049 * 13 12 11 15 15 C 1.38225 * 120.00493 * 179.72479 * 14 13 12 16 16 C 1.38316 * 119.99281 * 0.55272 * 15 14 13 17 17 Br 1.89099 * 120.01222 * 179.70271 * 16 15 14 18 18 C 1.38329 * 119.97978 * 359.71689 * 16 15 14 19 19 C 1.38220 * 119.99001 * 0.02562 * 18 16 15 20 20 C 1.53780 * 113.61741 * 152.33361 * 12 11 9 21 21 C 1.53784 * 87.08383 * 270.88398 * 20 12 11 22 22 H 1.08991 * 113.61788 * 220.01818 * 21 20 12 23 23 O 1.42902 * 113.69266 * 89.12135 * 21 20 12 24 24 C 1.53781 * 87.07840 * 334.56764 * 21 20 12 25 25 C 1.36645 * 109.08808 * 359.76089 * 8 7 3 26 26 H 1.08999 * 109.47186 * 84.73142 * 1 2 3 27 27 H 1.08999 * 109.46970 * 324.73135 * 1 2 3 28 28 H 1.09006 * 109.47554 * 204.73349 * 1 2 3 29 29 H 1.09004 * 109.47010 * 282.53293 * 4 3 2 30 30 H 0.96701 * 114.00274 * 180.02562 * 5 4 3 31 31 H 1.48502 * 110.00093 * 300.00006 * 6 4 3 32 32 H 1.48500 * 110.00104 * 61.32101 * 6 4 3 33 33 H 0.96999 * 119.99934 * 5.16301 * 11 9 8 34 34 H 1.07999 * 119.99463 * 359.97438 * 14 13 12 35 35 H 1.08004 * 119.99910 * 180.29161 * 15 14 13 36 36 H 1.08001 * 120.00463 * 180.02562 * 18 16 15 37 37 H 1.08001 * 119.99357 * 179.97438 * 19 18 16 38 38 H 1.09005 * 113.61219 * 25.43114 * 20 12 11 39 39 H 1.08999 * 113.61846 * 156.33252 * 20 12 11 40 40 H 0.96699 * 113.99971 * 82.46093 * 23 21 20 41 41 H 1.09005 * 113.61337 * 270.88654 * 24 21 20 42 42 H 1.08996 * 113.69593 * 139.99283 * 24 21 20 43 43 H 1.08003 * 123.35691 * 180.22464 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 -0.0009 5 8 0.5349 2.5665 0.9091 6 14 2.9342 3.7432 0.5267 7 16 3.8970 0.7892 0.0007 8 6 3.5936 -0.9428 0.0002 9 6 4.6230 -1.9864 0.0000 10 8 4.3000 -3.1597 -0.0008 11 7 5.9272 -1.6464 0.0006 12 6 6.9548 -2.6843 -0.1138 13 6 7.1621 -3.4466 1.1695 14 6 6.3829 -3.1624 2.2755 15 6 6.5689 -3.8653 3.4511 16 6 7.5424 -4.8451 3.5243 17 35 7.8030 -5.8012 5.1348 18 6 8.3256 -5.1252 2.4190 19 6 8.1354 -4.4256 1.2422 20 6 8.2613 -2.1896 -0.7565 21 6 7.6471 -2.5732 -2.1132 22 1 8.3572 -3.0347 -2.7992 23 8 6.8927 -1.5220 -2.7198 24 6 6.7830 -3.5880 -1.3462 25 6 2.2446 -1.1602 0.0049 26 1 -0.3633 0.0944 -1.0233 27 1 -0.3633 0.8390 0.5934 28 1 -0.3634 -0.9334 0.4300 29 1 1.2888 2.7629 -1.0044 30 1 0.1058 3.4316 0.9599 31 1 3.4152 3.4176 1.8935 32 1 4.0701 3.7233 -0.4296 33 1 6.1855 -0.7146 0.0768 34 1 5.6261 -2.3940 2.2198 35 1 5.9569 -3.6465 4.3137 36 1 9.0856 -5.8905 2.4755 37 1 8.7471 -4.6440 0.3793 38 1 8.4272 -1.1186 -0.6395 39 1 9.1333 -2.7858 -0.4878 40 1 7.4306 -0.8804 -3.2036 41 1 7.2508 -4.5666 -1.2386 42 1 5.7552 -3.6473 -1.7043 43 1 1.8018 -2.1453 0.0092 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891094_6739946.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:47:20 Heat of formation + Delta-G solvation = -8.827120 kcal Electronic energy + Delta-G solvation = -30269.444780 eV Core-core repulsion = 26034.617067 eV Total energy + Delta-G solvation = -4234.827714 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.018 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.25212 -40.24801 -39.61456 -39.17613 -37.44945 -36.34239 -34.20757 -33.12352 -32.25390 -31.83573 -30.27888 -30.17097 -27.13015 -26.93156 -25.34746 -24.26885 -23.75444 -22.46260 -21.81749 -20.44518 -19.98934 -19.13383 -18.75770 -18.56679 -17.98666 -17.38859 -16.87324 -16.43981 -16.20017 -16.06594 -15.94941 -15.70914 -15.43073 -15.07371 -14.85671 -14.63988 -14.53189 -14.47368 -14.29201 -14.28682 -13.82332 -13.44090 -13.20395 -13.10047 -13.02109 -12.90474 -12.69403 -12.49497 -12.41495 -12.26416 -12.11753 -12.00357 -11.65119 -11.50207 -11.19186 -11.11813 -10.90117 -10.58132 -10.17066 -10.00712 -9.68357 -9.50987 -9.39380 -5.35182 -0.58833 0.04773 0.31885 0.33901 0.68874 0.70642 1.03285 1.33844 1.46985 1.79010 1.90377 2.22453 2.52099 2.92994 3.16847 3.29300 3.39940 3.52481 3.57819 3.64177 3.75481 3.89257 3.91229 4.15877 4.18022 4.28009 4.30836 4.39564 4.42076 4.45884 4.56498 4.62854 4.64172 4.71623 4.81313 4.85462 4.90653 4.93442 5.02615 5.09647 5.17000 5.21802 5.31137 5.43397 5.54935 5.60890 5.77585 6.35829 6.44590 6.55069 7.13641 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C -0.080 4.080 3 C -0.197 4.197 4 C -0.032 4.032 5 O -0.537 6.537 6 Si 0.668 3.332 7 S 0.177 5.823 8 C -0.256 4.256 9 C 0.598 3.402 10 O -0.513 6.513 11 N -0.698 5.698 12 C 0.196 3.804 13 C -0.061 4.061 14 C -0.092 4.092 15 C -0.087 4.087 16 C -0.091 4.091 17 Br -0.050 7.050 18 C -0.087 4.087 19 C -0.108 4.108 20 C -0.164 4.164 21 C 0.080 3.920 22 H 0.077 0.923 23 O -0.544 6.544 24 C -0.126 4.126 25 C -0.048 4.048 26 H 0.067 0.933 27 H 0.098 0.902 28 H 0.064 0.936 29 H 0.085 0.915 30 H 0.384 0.616 31 H -0.237 1.237 32 H -0.236 1.236 33 H 0.401 0.599 34 H 0.123 0.877 35 H 0.132 0.868 36 H 0.135 0.865 37 H 0.133 0.867 38 H 0.083 0.917 39 H 0.109 0.891 40 H 0.381 0.619 41 H 0.108 0.892 42 H 0.095 0.905 43 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.492 7.256 -3.267 8.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.093 4.093 3 C -0.316 4.316 4 C -0.145 4.145 5 O -0.344 6.344 6 Si 0.567 3.433 7 S 0.445 5.555 8 C -0.375 4.375 9 C 0.385 3.615 10 O -0.390 6.390 11 N -0.349 5.349 12 C 0.109 3.891 13 C -0.063 4.063 14 C -0.112 4.112 15 C -0.107 4.107 16 C -0.170 4.170 17 Br 0.036 6.964 18 C -0.107 4.107 19 C -0.127 4.127 20 C -0.202 4.202 21 C 0.021 3.979 22 H 0.095 0.905 23 O -0.349 6.349 24 C -0.164 4.164 25 C -0.081 4.081 26 H 0.086 0.914 27 H 0.116 0.884 28 H 0.083 0.917 29 H 0.103 0.897 30 H 0.233 0.767 31 H -0.161 1.161 32 H -0.160 1.160 33 H 0.236 0.764 34 H 0.141 0.859 35 H 0.150 0.850 36 H 0.153 0.847 37 H 0.151 0.849 38 H 0.102 0.898 39 H 0.128 0.872 40 H 0.228 0.772 41 H 0.126 0.874 42 H 0.113 0.887 43 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 3.206 6.124 -2.066 7.214 hybrid contribution -1.009 -0.296 -0.723 1.276 sum 2.197 5.828 -2.789 6.824 Atomic orbital electron populations 1.20773 0.88639 1.04172 1.02835 1.18716 0.98565 0.90317 1.01718 1.23128 0.97812 0.98639 1.11996 1.23971 0.97013 0.96723 0.96773 1.86452 1.46791 1.37586 1.63583 0.94832 0.78954 0.87203 0.82350 1.82905 1.03412 0.99562 1.69652 1.24597 0.97954 0.96507 1.18457 1.16841 0.81276 0.87448 0.75949 1.90872 1.81434 1.17842 1.48811 1.45293 1.04573 1.09613 1.75471 1.19879 0.88765 0.88876 0.91555 1.19947 0.95545 0.96257 0.94539 1.20933 0.98754 0.99541 0.91925 1.21123 0.96475 0.94415 0.98671 1.21838 1.01487 1.00363 0.93332 1.96768 1.96701 1.73869 1.29095 1.21082 0.98659 0.99454 0.91528 1.20872 0.98156 0.95826 0.97829 1.24100 0.96009 1.03167 0.96969 1.22718 0.93494 0.89354 0.92370 0.90545 1.86541 1.36954 1.39645 1.71776 1.23462 1.03218 0.96948 0.92760 1.20753 0.90882 1.00119 0.96349 0.91444 0.88354 0.91716 0.89722 0.76702 1.16063 1.16038 0.76413 0.85878 0.84999 0.84685 0.84909 0.89802 0.87241 0.77170 0.87413 0.88678 0.82578 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.11 9.73 36.01 0.35 0.24 16 2 C -0.08 -0.20 5.74 -106.45 -0.61 -0.82 16 3 C -0.20 -0.37 5.64 -35.86 -0.20 -0.57 16 4 C -0.03 0.03 2.73 36.00 0.10 0.13 16 5 O -0.54 0.78 9.99 -35.23 -0.35 0.43 16 6 Si 0.67 -1.31 31.02 -169.99 -5.27 -6.58 16 7 S 0.18 0.27 19.42 -107.50 -2.09 -1.81 16 8 C -0.26 -0.84 6.45 -36.79 -0.24 -1.08 16 9 C 0.60 2.36 5.86 -12.89 -0.08 2.28 16 10 O -0.51 -3.52 14.81 5.19 0.08 -3.44 16 11 N -0.70 -0.96 3.83 -49.25 -0.19 -1.15 16 12 C 0.20 0.12 0.97 -132.16 -0.13 -0.01 16 13 C -0.06 -0.10 5.13 -104.62 -0.54 -0.64 16 14 C -0.09 -0.27 8.80 -39.58 -0.35 -0.62 16 15 C -0.09 -0.24 9.79 -39.56 -0.39 -0.63 16 16 C -0.09 -0.23 6.22 -39.52 -0.25 -0.48 16 17 Br -0.05 -0.12 33.70 -68.01 -2.29 -2.42 16 18 C -0.09 -0.11 9.79 -39.55 -0.39 -0.50 16 19 C -0.11 -0.05 8.40 -39.59 -0.33 -0.38 16 20 C -0.16 0.35 7.07 -25.92 -0.18 0.17 16 21 C 0.08 -0.11 5.27 -25.92 -0.14 -0.24 16 22 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 23 O -0.54 0.20 13.09 -35.23 -0.46 -0.26 16 24 C -0.13 -0.12 6.56 -25.92 -0.17 -0.29 16 25 C -0.05 -0.16 9.78 -40.43 -0.40 -0.56 16 26 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 27 H 0.10 0.10 5.34 -51.93 -0.28 -0.18 16 28 H 0.06 0.04 8.10 -51.93 -0.42 -0.38 16 29 H 0.09 -0.22 7.96 -51.93 -0.41 -0.63 16 30 H 0.38 -2.48 8.74 45.56 0.40 -2.08 16 31 H -0.24 -0.32 7.11 56.52 0.40 0.08 16 32 H -0.24 0.04 7.11 56.52 0.40 0.44 16 33 H 0.40 -0.07 7.88 -40.82 -0.32 -0.40 16 34 H 0.12 0.39 6.18 -52.49 -0.32 0.07 16 35 H 0.13 0.24 8.06 -52.48 -0.42 -0.18 16 36 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 37 H 0.13 -0.29 6.73 -52.49 -0.35 -0.65 16 38 H 0.08 -0.23 8.13 -51.93 -0.42 -0.65 16 39 H 0.11 -0.38 6.81 -51.93 -0.35 -0.73 16 40 H 0.38 -1.69 9.12 45.56 0.42 -1.28 16 41 H 0.11 -0.05 7.13 -51.93 -0.37 -0.42 16 42 H 0.09 0.40 6.64 -51.93 -0.34 0.05 16 43 H 0.16 0.47 8.06 -52.48 -0.42 0.04 16 LS Contribution 383.29 15.07 5.78 5.78 Total: 0.00 -9.00 383.29 -12.83 -21.84 By element: Atomic # 1 Polarization: -4.31 SS G_CDS: -4.10 Total: -8.41 kcal Atomic # 6 Polarization: -0.05 SS G_CDS: -3.93 Total: -3.98 kcal Atomic # 7 Polarization: -0.96 SS G_CDS: -0.19 Total: -1.15 kcal Atomic # 8 Polarization: -2.53 SS G_CDS: -0.74 Total: -3.27 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.27 Total: -6.58 kcal Atomic # 16 Polarization: 0.27 SS G_CDS: -2.09 Total: -1.81 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -2.29 Total: -2.42 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -9.00 -12.83 -21.84 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_6739946.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.010 kcal (2) G-P(sol) polarization free energy of solvation -9.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.832 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.837 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds