Wall clock time and date at job start Sat Mar 6 2021 23:47:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33811 * 122.44820 * 2 1 4 4 C 1.50697 * 124.52593 * 359.95926 * 3 2 1 5 5 O 1.42898 * 109.47253 * 42.52902 * 4 3 2 6 6 Si 1.86298 * 109.47127 * 162.53044 * 4 3 2 7 7 S 1.70622 * 110.95256 * 179.97438 * 3 2 1 8 8 C 1.75830 * 91.56140 * 0.02562 * 7 3 2 9 9 C 1.46590 * 125.45769 * 179.97438 * 8 7 3 10 10 O 1.21702 * 119.99956 * 180.02562 * 9 8 7 11 11 N 1.34778 * 119.99816 * 0.02562 * 9 8 7 12 12 C 1.46495 * 119.99826 * 185.16376 * 11 9 8 13 13 C 1.50699 * 112.85045 * 283.64020 * 12 11 9 14 14 C 1.38242 * 119.98792 * 2.26049 * 13 12 11 15 15 C 1.38225 * 120.00493 * 179.72479 * 14 13 12 16 16 C 1.38316 * 119.99281 * 0.55272 * 15 14 13 17 17 Br 1.89099 * 120.01222 * 179.70271 * 16 15 14 18 18 C 1.38329 * 119.97978 * 359.71689 * 16 15 14 19 19 C 1.38220 * 119.99001 * 0.02562 * 18 16 15 20 20 C 1.53780 * 113.61741 * 152.33361 * 12 11 9 21 21 C 1.53784 * 87.08383 * 270.88398 * 20 12 11 22 22 H 1.08991 * 113.61788 * 220.01818 * 21 20 12 23 23 O 1.42902 * 113.69266 * 89.12135 * 21 20 12 24 24 C 1.53781 * 87.07840 * 334.56764 * 21 20 12 25 25 C 1.36645 * 109.08808 * 359.76089 * 8 7 3 26 26 H 1.08999 * 109.47186 * 84.73142 * 1 2 3 27 27 H 1.08999 * 109.46970 * 324.73135 * 1 2 3 28 28 H 1.09006 * 109.47554 * 204.73349 * 1 2 3 29 29 H 1.09004 * 109.47010 * 282.53293 * 4 3 2 30 30 H 0.96701 * 114.00274 * 180.02562 * 5 4 3 31 31 H 1.48502 * 110.00093 * 300.00006 * 6 4 3 32 32 H 1.48500 * 110.00104 * 61.32101 * 6 4 3 33 33 H 0.96999 * 119.99934 * 5.16301 * 11 9 8 34 34 H 1.07999 * 119.99463 * 359.97438 * 14 13 12 35 35 H 1.08004 * 119.99910 * 180.29161 * 15 14 13 36 36 H 1.08001 * 120.00463 * 180.02562 * 18 16 15 37 37 H 1.08001 * 119.99357 * 179.97438 * 19 18 16 38 38 H 1.09005 * 113.61219 * 25.43114 * 20 12 11 39 39 H 1.08999 * 113.61846 * 156.33252 * 20 12 11 40 40 H 0.96699 * 113.99971 * 82.46093 * 23 21 20 41 41 H 1.09005 * 113.61337 * 270.88654 * 24 21 20 42 42 H 1.08996 * 113.69593 * 139.99283 * 24 21 20 43 43 H 1.08003 * 123.35691 * 180.22464 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 -0.0009 5 8 0.5349 2.5665 0.9091 6 14 2.9342 3.7432 0.5267 7 16 3.8970 0.7892 0.0007 8 6 3.5936 -0.9428 0.0002 9 6 4.6230 -1.9864 0.0000 10 8 4.3000 -3.1597 -0.0008 11 7 5.9272 -1.6464 0.0006 12 6 6.9548 -2.6843 -0.1138 13 6 7.1621 -3.4466 1.1695 14 6 6.3829 -3.1624 2.2755 15 6 6.5689 -3.8653 3.4511 16 6 7.5424 -4.8451 3.5243 17 35 7.8030 -5.8012 5.1348 18 6 8.3256 -5.1252 2.4190 19 6 8.1354 -4.4256 1.2422 20 6 8.2613 -2.1896 -0.7565 21 6 7.6471 -2.5732 -2.1132 22 1 8.3572 -3.0347 -2.7992 23 8 6.8927 -1.5220 -2.7198 24 6 6.7830 -3.5880 -1.3462 25 6 2.2446 -1.1602 0.0049 26 1 -0.3633 0.0944 -1.0233 27 1 -0.3633 0.8390 0.5934 28 1 -0.3634 -0.9334 0.4300 29 1 1.2888 2.7629 -1.0044 30 1 0.1058 3.4316 0.9599 31 1 3.4152 3.4176 1.8935 32 1 4.0701 3.7233 -0.4296 33 1 6.1855 -0.7146 0.0768 34 1 5.6261 -2.3940 2.2198 35 1 5.9569 -3.6465 4.3137 36 1 9.0856 -5.8905 2.4755 37 1 8.7471 -4.6440 0.3793 38 1 8.4272 -1.1186 -0.6395 39 1 9.1333 -2.7858 -0.4878 40 1 7.4306 -0.8804 -3.2036 41 1 7.2508 -4.5666 -1.2386 42 1 5.7552 -3.6473 -1.7043 43 1 1.8018 -2.1453 0.0092 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_6739946.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:47:19 Heat of formation + Delta-G solvation = -8.335637 kcal Electronic energy + Delta-G solvation = -30269.423468 eV Core-core repulsion = 26034.617067 eV Total energy + Delta-G solvation = -4234.806401 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.018 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.32321 -40.40478 -39.70205 -39.25523 -37.39224 -36.35387 -34.36512 -33.23889 -32.36900 -31.93951 -30.39718 -30.22623 -27.15480 -26.94571 -25.37815 -24.36294 -23.86221 -22.53446 -21.94701 -20.53373 -20.07105 -19.26765 -18.76364 -18.49396 -17.97153 -17.43616 -16.99486 -16.50928 -16.34287 -16.24063 -15.96401 -15.79569 -15.42982 -15.11222 -14.91248 -14.73090 -14.61610 -14.50081 -14.44214 -14.39062 -13.82782 -13.38845 -13.29020 -13.19818 -13.03471 -12.98970 -12.64289 -12.54588 -12.50390 -12.35996 -12.22914 -12.03916 -11.72298 -11.61765 -11.36561 -11.11038 -11.04753 -10.52974 -10.28082 -10.12904 -9.79868 -9.63756 -9.52693 -5.22493 -0.78055 -0.07635 0.19244 0.19829 0.52806 0.54328 1.04068 1.25364 1.55316 1.78768 1.88046 1.98068 2.41895 3.06216 3.27515 3.35603 3.43223 3.51222 3.58028 3.68268 3.70845 3.81545 3.84930 4.04194 4.20718 4.25004 4.27544 4.34240 4.40136 4.53490 4.55287 4.60111 4.71574 4.74043 4.75930 4.80656 4.82981 4.91941 4.94229 4.95858 5.07187 5.09688 5.23011 5.30183 5.46398 5.51183 5.67831 6.20371 6.86862 6.87312 6.92643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.096 4.096 3 C -0.205 4.205 4 C -0.041 4.041 5 O -0.551 6.551 6 Si 0.754 3.246 7 S 0.198 5.802 8 C -0.276 4.276 9 C 0.596 3.404 10 O -0.552 6.552 11 N -0.687 5.687 12 C 0.183 3.817 13 C -0.065 4.065 14 C -0.110 4.110 15 C -0.101 4.101 16 C -0.104 4.104 17 Br -0.054 7.054 18 C -0.090 4.090 19 C -0.102 4.102 20 C -0.148 4.148 21 C 0.087 3.913 22 H 0.101 0.899 23 O -0.567 6.567 24 C -0.135 4.135 25 C -0.060 4.060 26 H 0.074 0.926 27 H 0.101 0.899 28 H 0.062 0.938 29 H 0.109 0.891 30 H 0.406 0.594 31 H -0.285 1.285 32 H -0.257 1.257 33 H 0.408 0.592 34 H 0.111 0.889 35 H 0.131 0.869 36 H 0.153 0.847 37 H 0.166 0.834 38 H 0.094 0.906 39 H 0.132 0.868 40 H 0.398 0.602 41 H 0.122 0.878 42 H 0.056 0.944 43 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.796 8.571 -4.376 10.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.109 4.109 3 C -0.324 4.324 4 C -0.152 4.152 5 O -0.362 6.362 6 Si 0.656 3.344 7 S 0.465 5.535 8 C -0.396 4.396 9 C 0.384 3.616 10 O -0.432 6.432 11 N -0.338 5.338 12 C 0.097 3.903 13 C -0.066 4.066 14 C -0.130 4.130 15 C -0.120 4.120 16 C -0.183 4.183 17 Br 0.031 6.969 18 C -0.109 4.109 19 C -0.121 4.121 20 C -0.185 4.185 21 C 0.028 3.972 22 H 0.118 0.882 23 O -0.376 6.376 24 C -0.173 4.173 25 C -0.094 4.094 26 H 0.093 0.907 27 H 0.120 0.880 28 H 0.081 0.919 29 H 0.126 0.874 30 H 0.259 0.741 31 H -0.211 1.211 32 H -0.183 1.183 33 H 0.244 0.756 34 H 0.129 0.871 35 H 0.149 0.851 36 H 0.171 0.829 37 H 0.183 0.817 38 H 0.113 0.887 39 H 0.150 0.850 40 H 0.248 0.752 41 H 0.140 0.860 42 H 0.075 0.925 43 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 4.510 7.488 -3.193 9.306 hybrid contribution -1.441 -0.655 -0.358 1.623 sum 3.069 6.833 -3.551 8.290 Atomic orbital electron populations 1.20773 0.87671 1.04253 1.03350 1.18873 0.99385 0.90175 1.02429 1.23625 0.97931 1.00129 1.10704 1.24176 0.97791 0.94981 0.98278 1.86397 1.46682 1.39746 1.63417 0.93849 0.76911 0.85452 0.78157 1.82740 1.03564 0.98012 1.69136 1.24681 0.97935 0.97696 1.19278 1.16998 0.82154 0.87039 0.75457 1.90835 1.82130 1.19330 1.50905 1.45237 1.04032 1.10301 1.74192 1.20175 0.90057 0.89001 0.91103 1.20164 0.95452 0.96624 0.94407 1.20952 0.99266 0.99960 0.92786 1.21178 0.97039 0.95018 0.98799 1.21952 1.02004 1.00580 0.93792 1.96747 1.96680 1.73862 1.29568 1.21379 0.98583 0.99692 0.91258 1.21205 0.97725 0.94638 0.98544 1.24108 0.94892 1.04169 0.95378 1.22720 0.92824 0.88574 0.93124 0.88174 1.86502 1.38409 1.40421 1.72244 1.23550 1.01637 0.98520 0.93605 1.20861 0.91312 1.00372 0.96852 0.90691 0.88022 0.91857 0.87384 0.74082 1.21141 1.18262 0.75599 0.87104 0.85146 0.82905 0.81656 0.88750 0.85035 0.75177 0.86038 0.92537 0.83393 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.28 9.73 71.24 0.69 0.42 16 2 C -0.10 -0.61 5.74 -21.05 -0.12 -0.73 16 3 C -0.20 -0.86 5.64 24.68 0.14 -0.72 16 4 C -0.04 0.12 2.73 71.23 0.19 0.31 16 5 O -0.55 2.13 9.99 -148.98 -1.49 0.64 16 6 Si 0.75 -3.41 31.02 68.60 2.13 -1.28 16 7 S 0.20 0.81 19.42 -56.49 -1.10 -0.29 16 8 C -0.28 -2.47 6.45 24.08 0.16 -2.31 16 9 C 0.60 6.27 5.86 86.42 0.51 6.77 16 10 O -0.55 -9.49 14.81 -4.35 -0.06 -9.55 16 11 N -0.69 -2.87 3.83 -427.93 -1.64 -4.50 16 12 C 0.18 0.29 0.97 3.38 0.00 0.29 16 13 C -0.06 -0.25 5.13 -19.86 -0.10 -0.35 16 14 C -0.11 -0.86 8.80 22.27 0.20 -0.66 16 15 C -0.10 -0.75 9.79 22.29 0.22 -0.54 16 16 C -0.10 -0.62 6.22 22.31 0.14 -0.48 16 17 Br -0.05 -0.31 33.70 -20.37 -0.69 -0.99 16 18 C -0.09 -0.19 9.79 22.29 0.22 0.03 16 19 C -0.10 0.00 8.40 22.27 0.19 0.19 16 20 C -0.15 0.89 7.07 31.12 0.22 1.11 16 21 C 0.09 -0.33 5.27 31.12 0.16 -0.17 16 22 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 23 O -0.57 0.64 13.09 -148.98 -1.95 -1.31 16 24 C -0.14 -0.31 6.56 31.12 0.20 -0.11 16 25 C -0.06 -0.56 9.78 21.72 0.21 -0.35 16 26 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 27 H 0.10 0.20 5.34 -2.39 -0.01 0.19 16 28 H 0.06 0.16 8.10 -2.38 -0.02 0.14 16 29 H 0.11 -0.77 7.96 -2.38 -0.02 -0.79 16 30 H 0.41 -5.90 8.74 -74.06 -0.65 -6.55 16 31 H -0.29 -0.99 7.11 99.48 0.71 -0.28 16 32 H -0.26 0.28 7.11 99.48 0.71 0.98 16 33 H 0.41 0.25 7.88 -92.71 -0.73 -0.48 16 34 H 0.11 1.04 6.18 -2.91 -0.02 1.03 16 35 H 0.13 0.83 8.06 -2.91 -0.02 0.81 16 36 H 0.15 -0.29 8.06 -2.91 -0.02 -0.31 16 37 H 0.17 -1.18 6.73 -2.91 -0.02 -1.20 16 38 H 0.09 -0.71 8.13 -2.38 -0.02 -0.73 16 39 H 0.13 -1.34 6.81 -2.39 -0.02 -1.35 16 40 H 0.40 -3.94 9.12 -74.06 -0.68 -4.61 16 41 H 0.12 -0.18 7.13 -2.38 -0.02 -0.19 16 42 H 0.06 0.61 6.64 -2.39 -0.02 0.59 16 43 H 0.15 1.43 8.06 -2.91 -0.02 1.41 16 Total: 0.00 -24.26 383.29 -2.47 -26.74 By element: Atomic # 1 Polarization: -11.24 SS G_CDS: -0.91 Total: -12.15 kcal Atomic # 6 Polarization: -0.53 SS G_CDS: 3.23 Total: 2.70 kcal Atomic # 7 Polarization: -2.87 SS G_CDS: -1.64 Total: -4.50 kcal Atomic # 8 Polarization: -6.72 SS G_CDS: -3.50 Total: -10.23 kcal Atomic # 14 Polarization: -3.41 SS G_CDS: 2.13 Total: -1.28 kcal Atomic # 16 Polarization: 0.81 SS G_CDS: -1.10 Total: -0.29 kcal Atomic # 35 Polarization: -0.31 SS G_CDS: -0.69 Total: -0.99 kcal Total: -24.26 -2.47 -26.74 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_6739946.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.401 kcal (2) G-P(sol) polarization free energy of solvation -24.263 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.737 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds