Wall clock time and date at job start Sat Mar 6 2021 23:47:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37936 * 120.07114 * 2 1 4 4 C 1.38386 * 120.14559 * 179.72155 * 3 2 1 5 5 C 1.50703 * 119.85760 * 180.25138 * 4 3 2 6 6 C 1.38339 * 120.28842 * 0.54948 * 4 3 2 7 7 C 1.50702 * 119.92831 * 179.74503 * 6 4 3 8 8 O 1.42900 * 109.47133 * 284.98261 * 7 6 4 9 9 Si 1.86294 * 109.47198 * 164.97909 * 7 6 4 10 10 C 1.37977 * 120.14616 * 359.72701 * 6 4 3 11 11 C 1.39553 * 119.85344 * 359.97438 * 10 6 4 12 12 C 1.47845 * 120.14749 * 179.97438 * 11 10 6 13 13 O 1.21552 * 120.00559 * 173.82362 * 12 11 10 14 14 N 1.34779 * 119.99546 * 353.82668 * 12 11 10 15 15 C 1.46504 * 119.99758 * 184.53404 * 14 12 11 16 16 C 1.50698 * 112.84847 * 66.40714 * 15 14 12 17 17 C 1.38238 * 119.99339 * 187.41552 * 16 15 14 18 18 C 1.38225 * 120.01374 * 179.76424 * 17 16 15 19 19 C 1.38327 * 119.98591 * 0.51388 * 18 17 16 20 20 Br 1.89093 * 120.00746 * 179.76418 * 19 18 17 21 21 C 1.38325 * 119.97918 * 359.74489 * 19 18 17 22 22 C 1.38218 * 119.99108 * 359.97438 * 21 19 18 23 23 C 1.53778 * 113.61684 * 295.21288 * 15 14 12 24 24 C 1.53784 * 87.07860 * 270.88222 * 23 15 14 25 25 H 1.09003 * 113.61405 * 220.02065 * 24 23 15 26 26 O 1.42901 * 113.61680 * 89.20166 * 24 23 15 27 27 C 1.53775 * 87.08305 * 334.56707 * 24 23 15 28 28 H 1.09000 * 109.47322 * 263.03699 * 1 2 3 29 29 H 1.08999 * 109.47136 * 143.03667 * 1 2 3 30 30 H 1.08993 * 109.47234 * 23.03686 * 1 2 3 31 31 H 1.08003 * 119.93183 * 359.97438 * 3 2 1 32 32 H 1.08998 * 109.46948 * 270.29695 * 5 4 3 33 33 H 1.09006 * 109.46534 * 30.29956 * 5 4 3 34 34 H 1.09000 * 109.46997 * 150.29195 * 5 4 3 35 35 H 1.09003 * 109.46572 * 44.97667 * 7 6 4 36 36 H 0.96698 * 114.00083 * 299.99887 * 8 7 6 37 37 H 1.48504 * 110.00009 * 58.68663 * 9 7 6 38 38 H 1.48502 * 110.00107 * 180.02562 * 9 7 6 39 39 H 1.08004 * 120.07634 * 179.97438 * 10 6 4 40 40 H 0.97002 * 120.00356 * 4.53600 * 14 12 11 41 41 H 1.08004 * 119.99348 * 0.02562 * 17 16 15 42 42 H 1.08001 * 120.00257 * 180.27615 * 18 17 16 43 43 H 1.07996 * 120.00428 * 179.97438 * 21 19 18 44 44 H 1.07998 * 119.99397 * 180.02562 * 22 21 19 45 45 H 1.09001 * 113.61656 * 25.42569 * 23 15 14 46 46 H 1.09000 * 113.61320 * 156.33856 * 23 15 14 47 47 H 0.96698 * 114.00546 * 180.02562 * 26 24 23 48 48 H 1.09003 * 113.61604 * 270.88913 * 27 24 23 49 49 H 1.09000 * 113.61843 * 139.97923 * 27 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1955 0.0058 5 6 4.3306 2.5035 0.0115 6 6 4.2813 0.0019 0.0002 7 6 5.7883 0.0134 0.0008 8 8 6.2624 0.3717 -1.2988 9 14 6.4220 -1.6804 0.4479 10 6 3.6021 -1.1991 -0.0055 11 6 2.2066 -1.2080 -0.0052 12 6 1.4722 -2.4911 -0.0119 13 8 0.2620 -2.4995 0.1017 14 7 2.1447 -3.6517 -0.1439 15 6 1.4111 -4.9153 -0.2505 16 6 0.6050 -5.0187 -1.5195 17 6 -0.2631 -6.0789 -1.7023 18 6 -1.0063 -6.1715 -2.8641 19 6 -0.8733 -5.2089 -3.8485 20 35 -1.8847 -5.3387 -5.4409 21 6 -0.0005 -4.1512 -3.6675 22 6 0.7379 -4.0562 -2.5029 23 6 0.6154 -5.2744 1.0156 24 6 1.8822 -5.9903 1.5134 25 1 1.6799 -6.9344 2.0193 26 8 2.7657 -5.1436 2.2513 27 6 2.2747 -6.1551 0.0358 28 1 -0.3634 -0.1246 1.0201 29 1 -0.3633 -0.8211 -0.6179 30 1 -0.3633 0.9456 -0.4021 31 1 1.6582 2.1291 -0.0004 32 1 4.5107 2.8234 -1.0148 33 1 3.7386 3.2585 0.5290 34 1 5.2836 2.3744 0.5246 35 1 6.1457 0.7395 0.7309 36 1 5.9820 -0.2322 -2.0001 37 1 5.9156 -2.6846 -0.5219 38 1 7.9070 -1.6822 0.4526 39 1 4.1492 -2.1303 -0.0103 40 1 3.1144 -3.6503 -0.1683 41 1 -0.3639 -6.8326 -0.9354 42 1 -1.6878 -6.9975 -3.0048 43 1 0.1040 -3.3996 -4.4360 44 1 1.4191 -3.2302 -2.3614 45 1 0.3382 -4.4088 1.6172 46 1 -0.2215 -5.9473 0.8290 47 1 3.5645 -5.5880 2.5667 48 1 1.8913 -7.0686 -0.4187 49 1 3.3370 -6.0004 -0.1538 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_9599494.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:47:36 Heat of formation + Delta-G solvation = -14.513840 kcal Electronic energy + Delta-G solvation = -34847.319997 eV Core-core repulsion = 30367.555824 eV Total energy + Delta-G solvation = -4479.764174 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.33758 -41.15130 -39.71776 -39.28159 -37.71325 -36.27399 -34.61751 -34.39596 -33.18940 -32.96998 -31.96121 -30.35746 -29.32364 -28.53868 -26.93431 -25.85569 -25.35866 -23.95635 -23.70302 -22.82433 -22.15790 -21.00839 -20.23834 -19.17911 -18.63850 -17.88737 -17.52117 -17.31492 -16.75987 -16.45841 -16.39665 -16.31181 -16.04303 -15.86550 -15.72738 -15.38098 -15.17482 -14.79794 -14.64729 -14.56108 -14.43947 -14.32447 -14.04590 -13.91176 -13.69358 -13.48680 -13.24880 -13.10263 -13.07763 -12.87305 -12.69476 -12.58091 -12.53563 -12.38180 -12.27382 -11.92778 -11.77216 -11.67529 -11.36021 -11.33255 -10.90697 -10.59217 -10.56966 -10.13336 -10.07735 -9.90369 -9.63783 -9.55276 -4.92844 -0.23695 -0.01621 0.16537 0.24919 0.58684 1.27576 1.53075 1.76582 1.92923 1.98663 2.47693 2.65022 3.16766 3.39224 3.44270 3.49225 3.51521 3.62920 3.66523 3.69220 3.74157 3.80024 3.86068 3.90707 4.15772 4.19888 4.25659 4.36525 4.41802 4.48699 4.51203 4.59710 4.60448 4.68139 4.69034 4.75766 4.80389 4.83649 4.84239 4.89231 4.90706 5.00283 5.03868 5.06101 5.12870 5.14116 5.15022 5.25904 5.33034 5.47582 5.50059 5.65992 5.73267 5.80662 6.45496 6.47765 6.99598 7.18931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.024 4.024 3 C -0.137 4.137 4 C -0.030 4.030 5 C -0.119 4.119 6 C -0.134 4.134 7 C -0.080 4.080 8 O -0.542 6.542 9 Si 0.753 3.247 10 C -0.073 4.073 11 C -0.157 4.157 12 C 0.562 3.438 13 O -0.546 6.546 14 N -0.690 5.690 15 C 0.186 3.814 16 C -0.059 4.059 17 C -0.105 4.105 18 C -0.092 4.092 19 C -0.105 4.105 20 Br -0.057 7.057 21 C -0.100 4.100 22 C -0.109 4.109 23 C -0.135 4.135 24 C 0.088 3.912 25 H 0.096 0.904 26 O -0.563 6.563 27 C -0.151 4.151 28 H 0.069 0.931 29 H 0.077 0.923 30 H 0.070 0.930 31 H 0.144 0.856 32 H 0.076 0.924 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.127 0.873 36 H 0.385 0.615 37 H -0.265 1.265 38 H -0.298 1.298 39 H 0.144 0.856 40 H 0.409 0.591 41 H 0.161 0.839 42 H 0.149 0.851 43 H 0.131 0.869 44 H 0.118 0.882 45 H 0.058 0.942 46 H 0.117 0.883 47 H 0.399 0.601 48 H 0.124 0.876 49 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.354 -3.695 3.746 6.829 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.025 4.025 3 C -0.155 4.155 4 C -0.030 4.030 5 C -0.176 4.176 6 C -0.134 4.134 7 C -0.189 4.189 8 O -0.350 6.350 9 Si 0.657 3.343 10 C -0.091 4.091 11 C -0.160 4.160 12 C 0.351 3.649 13 O -0.425 6.425 14 N -0.342 5.342 15 C 0.099 3.901 16 C -0.060 4.060 17 C -0.124 4.124 18 C -0.111 4.111 19 C -0.185 4.185 20 Br 0.028 6.972 21 C -0.119 4.119 22 C -0.128 4.128 23 C -0.173 4.173 24 C 0.029 3.971 25 H 0.113 0.887 26 O -0.371 6.371 27 C -0.188 4.188 28 H 0.088 0.912 29 H 0.096 0.904 30 H 0.089 0.911 31 H 0.161 0.839 32 H 0.095 0.905 33 H 0.097 0.903 34 H 0.097 0.903 35 H 0.144 0.856 36 H 0.234 0.766 37 H -0.191 1.191 38 H -0.226 1.226 39 H 0.161 0.839 40 H 0.247 0.753 41 H 0.178 0.822 42 H 0.166 0.834 43 H 0.149 0.851 44 H 0.136 0.864 45 H 0.077 0.923 46 H 0.135 0.865 47 H 0.249 0.751 48 H 0.142 0.858 49 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 3.401 -3.518 3.169 5.830 hybrid contribution 0.701 0.303 -1.016 1.271 sum 4.102 -3.214 2.153 5.639 Atomic orbital electron populations 1.20997 0.90259 1.02996 1.03021 1.20181 0.96831 0.91972 0.93554 1.21185 0.93764 0.97940 1.02638 1.20208 0.93371 0.95933 0.93512 1.20937 1.00428 0.92993 1.03203 1.20084 0.96441 0.92595 1.04283 1.25181 0.91138 1.14278 0.88328 1.86592 1.76329 1.55109 1.16938 0.94146 0.77458 0.73478 0.89187 1.21299 0.92670 0.98332 0.96819 1.19693 0.93761 0.92889 1.09705 1.18312 0.86897 0.84003 0.75716 1.90750 1.14767 1.87311 1.49697 1.45361 1.10198 1.04471 1.74182 1.20076 0.93624 0.85031 0.91341 1.20126 0.96545 0.94516 0.94852 1.21186 0.95202 0.98415 0.97622 1.21345 0.99278 0.98018 0.92506 1.21935 1.01441 1.00338 0.94752 1.96744 1.71019 1.98388 1.31038 1.21180 0.95388 0.97037 0.98338 1.20966 0.99625 0.99004 0.93211 1.23556 0.97362 1.01302 0.95094 1.22670 0.90229 0.93542 0.90666 0.88669 1.86490 1.36605 1.40619 1.73430 1.24079 1.01044 0.96153 0.97568 0.91241 0.90445 0.91121 0.83866 0.90510 0.90315 0.90345 0.85557 0.76621 1.19141 1.22628 0.83919 0.75300 0.82166 0.83356 0.85110 0.86389 0.92316 0.86522 0.75069 0.85828 0.88750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.68 8.73 71.24 0.62 -0.06 16 2 C -0.02 -0.12 5.91 -19.61 -0.12 -0.23 16 3 C -0.14 -0.27 9.31 22.23 0.21 -0.06 16 4 C -0.03 -0.02 5.89 -19.80 -0.12 -0.13 16 5 C -0.12 0.25 9.53 71.24 0.68 0.93 16 6 C -0.13 0.09 5.25 -19.90 -0.10 -0.01 16 7 C -0.08 0.21 2.04 71.24 0.15 0.36 16 8 O -0.54 0.02 12.80 -148.98 -1.91 -1.88 16 9 Si 0.75 -3.45 30.24 68.60 2.07 -1.38 16 10 C -0.07 0.04 8.14 22.53 0.18 0.23 16 11 C -0.16 -0.62 5.87 -20.09 -0.12 -0.74 16 12 C 0.56 3.11 5.73 86.79 0.50 3.61 16 13 O -0.55 -6.26 11.60 -3.88 -0.05 -6.31 16 14 N -0.69 -0.02 3.88 -426.76 -1.65 -1.68 16 15 C 0.19 -0.24 0.95 3.38 0.00 -0.23 16 16 C -0.06 -0.10 4.88 -19.86 -0.10 -0.20 16 17 C -0.11 0.08 8.47 22.27 0.19 0.26 16 18 C -0.09 -0.15 9.79 22.29 0.22 0.07 16 19 C -0.11 -0.51 6.22 22.31 0.14 -0.37 16 20 Br -0.06 -0.28 33.70 -20.37 -0.69 -0.97 16 21 C -0.10 -0.54 9.79 22.29 0.22 -0.32 16 22 C -0.11 -0.52 8.68 22.27 0.19 -0.32 16 23 C -0.14 0.08 6.60 31.12 0.21 0.29 16 24 C 0.09 -0.56 5.27 31.12 0.16 -0.39 16 25 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 26 O -0.56 2.80 13.09 -148.98 -1.95 0.85 16 27 C -0.15 1.17 7.11 31.12 0.22 1.39 16 28 H 0.07 0.49 8.14 -2.39 -0.02 0.47 16 29 H 0.08 0.77 5.86 -2.39 -0.01 0.75 16 30 H 0.07 0.18 8.04 -2.39 -0.02 0.16 16 31 H 0.14 -0.17 8.05 -2.91 -0.02 -0.19 16 32 H 0.08 -0.10 8.14 -2.39 -0.02 -0.12 16 33 H 0.08 -0.31 8.09 -2.38 -0.02 -0.33 16 34 H 0.08 -0.23 6.22 -2.39 -0.01 -0.25 16 35 H 0.13 -0.52 6.48 -2.39 -0.02 -0.53 16 36 H 0.38 -2.00 8.70 -74.06 -0.64 -2.65 16 37 H -0.27 0.96 6.68 99.48 0.66 1.63 16 38 H -0.30 -0.94 7.11 99.48 0.71 -0.23 16 39 H 0.14 -0.69 3.23 -2.91 -0.01 -0.70 16 40 H 0.41 -1.60 6.73 -92.71 -0.62 -2.22 16 41 H 0.16 -1.11 6.74 -2.91 -0.02 -1.13 16 42 H 0.15 -0.27 8.06 -2.91 -0.02 -0.29 16 43 H 0.13 0.54 8.06 -2.91 -0.02 0.52 16 44 H 0.12 0.58 6.28 -2.91 -0.02 0.56 16 45 H 0.06 0.41 7.17 -2.39 -0.02 0.39 16 46 H 0.12 -0.43 6.52 -2.39 -0.02 -0.45 16 47 H 0.40 -5.45 9.12 -74.06 -0.68 -6.13 16 48 H 0.12 -1.31 7.48 -2.39 -0.02 -1.33 16 49 H 0.09 -0.90 8.09 -2.39 -0.02 -0.92 16 Total: 0.00 -19.52 406.58 -1.74 -21.26 By element: Atomic # 1 Polarization: -13.06 SS G_CDS: -0.90 Total: -13.96 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: 3.33 Total: 4.07 kcal Atomic # 7 Polarization: -0.02 SS G_CDS: -1.65 Total: -1.68 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -3.90 Total: -7.34 kcal Atomic # 14 Polarization: -3.45 SS G_CDS: 2.07 Total: -1.38 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.69 Total: -0.97 kcal Total: -19.52 -1.74 -21.26 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_9599494.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.747 kcal (2) G-P(sol) polarization free energy of solvation -19.524 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.777 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.737 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.261 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.514 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds