Wall clock time and date at job start Sat Mar 6 2021 23:47:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.46980 * 2 1 4 4 C 1.50696 * 109.47358 * 119.99898 * 2 1 3 5 5 C 1.34241 * 126.50373 * 255.02483 * 4 2 1 6 6 N 1.36828 * 109.94060 * 179.97438 * 5 4 2 7 7 C 1.46499 * 125.06160 * 179.97438 * 6 5 4 8 8 C 1.50700 * 109.47460 * 265.02537 * 7 6 5 9 9 O 1.21281 * 119.99714 * 0.02562 * 8 7 6 10 10 N 1.34772 * 120.00087 * 179.97438 * 8 7 6 11 11 C 1.46507 * 119.99883 * 175.05391 * 10 8 7 12 12 C 1.50696 * 112.84873 * 291.19364 * 11 10 8 13 13 C 1.38241 * 119.99353 * 346.61349 * 12 11 10 14 14 C 1.38216 * 120.01273 * 179.77047 * 13 12 11 15 15 C 1.38324 * 119.98982 * 0.49885 * 14 13 12 16 16 Br 1.89101 * 120.01477 * 179.77151 * 15 14 13 17 17 C 1.38326 * 119.97938 * 359.75151 * 15 14 13 18 18 C 1.38223 * 119.99160 * 359.97438 * 17 15 14 19 19 C 1.53778 * 113.61417 * 159.88602 * 11 10 8 20 20 C 1.53775 * 87.08068 * 270.88387 * 19 11 10 21 21 H 1.09002 * 113.68869 * 220.00581 * 20 19 11 22 22 O 1.42904 * 113.61390 * 89.12062 * 20 19 11 23 23 C 1.53770 * 87.08328 * 334.56701 * 20 19 11 24 24 C 1.37695 * 109.87546 * 359.97438 * 6 5 4 25 25 C 1.39083 * 133.51257 * 180.02562 * 24 6 5 26 26 C 1.37788 * 119.77445 * 180.02562 * 25 24 6 27 27 C 1.38788 * 120.66868 * 359.91561 * 26 25 24 28 28 C 1.36659 * 120.52961 * 0.06444 * 27 26 25 29 29 C 1.39595 * 119.76100 * 359.97438 * 28 27 26 30 30 H 0.96702 * 113.99963 * 299.99900 * 1 2 3 31 31 H 1.08998 * 109.47209 * 240.00277 * 2 1 3 32 32 H 1.48502 * 109.99861 * 178.68479 * 3 2 1 33 33 H 1.48504 * 109.99836 * 300.00112 * 3 2 1 34 34 H 1.08002 * 125.02660 * 0.24372 * 5 4 2 35 35 H 1.08999 * 109.47522 * 25.02637 * 7 6 5 36 36 H 1.09007 * 109.47199 * 145.02600 * 7 6 5 37 37 H 0.96997 * 120.00014 * 355.05761 * 10 8 7 38 38 H 1.08001 * 119.99082 * 0.02562 * 13 12 11 39 39 H 1.08002 * 120.00976 * 180.23572 * 14 13 12 40 40 H 1.08003 * 120.00759 * 179.97438 * 17 15 14 41 41 H 1.07995 * 120.00101 * 180.02562 * 18 17 15 42 42 H 1.09002 * 113.61056 * 25.43757 * 19 11 10 43 43 H 1.09000 * 113.61430 * 156.33589 * 19 11 10 44 44 H 0.96698 * 114.00405 * 82.49252 * 22 20 19 45 45 H 1.09001 * 113.61879 * 270.88121 * 23 20 19 46 46 H 1.09007 * 113.68884 * 139.99042 * 23 20 19 47 47 H 1.07991 * 120.11417 * 359.97438 * 25 24 6 48 48 H 1.08006 * 119.66576 * 179.97438 * 26 25 24 49 49 H 1.08006 * 119.73389 * 180.02562 * 27 26 25 50 50 H 1.08003 * 120.11898 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4605 -0.1375 2.3231 6 7 2.8021 -1.0989 3.2349 7 6 3.4069 -0.8402 4.5439 8 6 4.9052 -0.9624 4.4381 9 8 5.4175 -1.2379 3.3739 10 7 5.6760 -0.7645 5.5258 11 6 7.1217 -0.9888 5.4498 12 6 7.4803 -2.4431 5.2841 13 6 6.5242 -3.4190 5.4953 14 6 6.8514 -4.7527 5.3388 15 6 8.1385 -5.1115 4.9809 16 35 8.5885 -6.9364 4.7730 17 6 9.0962 -4.1350 4.7748 18 6 8.7667 -2.8011 4.9259 19 6 7.9144 -0.2796 6.5604 20 6 7.9991 0.9323 5.6176 21 1 8.9674 1.4326 5.6334 22 8 6.9034 1.8398 5.7520 23 6 7.8377 -0.0606 4.4545 24 6 2.4929 -2.3456 2.7388 25 6 2.6271 -3.6360 3.2401 26 6 2.2137 -4.7105 2.4832 27 6 1.6620 -4.5191 1.2241 28 6 1.5204 -3.2599 0.7124 29 6 1.9333 -2.1569 1.4618 30 1 -0.3933 0.4417 0.7651 31 1 1.7923 -0.5138 -0.8900 32 1 3.5346 1.7703 0.0320 33 1 1.5614 2.4679 -1.2085 34 1 2.5925 0.9251 2.4637 35 1 3.1467 0.1662 4.8720 36 1 3.0334 -1.5658 5.2665 37 1 5.2735 -0.4735 6.3590 38 1 5.5203 -3.1389 5.7785 39 1 6.1034 -5.5149 5.5001 40 1 10.1014 -4.4146 4.4957 41 1 9.5142 -2.0386 4.7646 42 1 7.3307 -0.0919 7.4616 43 1 8.8806 -0.7391 6.7688 44 1 6.9992 2.4667 6.4820 45 1 8.7829 -0.4602 4.0871 46 1 7.1924 0.3030 3.6548 47 1 3.0547 -3.7953 4.2189 48 1 2.3191 -5.7119 2.8740 49 1 1.3426 -5.3722 0.6439 50 1 1.0906 -3.1186 -0.2683 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_9818708.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:47:40 Heat of formation + Delta-G solvation = 29.453288 kcal Electronic energy + Delta-G solvation = -37887.393835 eV Core-core repulsion = 33087.658027 eV Total energy + Delta-G solvation = -4799.735808 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 457.072 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -42.60376 -42.03522 -39.94497 -39.34684 -38.09634 -37.58838 -36.24775 -34.39742 -33.78540 -33.19183 -32.05457 -31.39661 -30.36390 -30.23359 -28.93289 -26.98541 -26.12120 -25.21480 -23.96336 -23.72390 -22.87271 -22.40160 -21.67475 -20.66631 -20.30620 -18.76744 -18.68070 -18.32778 -17.84429 -17.59601 -17.27877 -16.88622 -16.44412 -16.42817 -16.17746 -16.01087 -15.99753 -15.54057 -15.46427 -15.31522 -14.93512 -14.80638 -14.70556 -14.61609 -14.39621 -14.35188 -14.07618 -13.80277 -13.62984 -13.37823 -13.11768 -13.07311 -12.72317 -12.59452 -12.57603 -12.42814 -12.29351 -12.26947 -12.13236 -11.83147 -11.70919 -11.47762 -11.34334 -10.96065 -10.93049 -10.54209 -10.32031 -10.10597 -10.09186 -9.58707 -9.15742 -8.62540 -5.07140 -0.02945 0.13695 0.23714 0.58094 0.62889 1.32698 1.41815 1.52655 1.63048 1.74654 1.98076 2.16454 2.46406 2.93944 3.12392 3.43334 3.48954 3.58582 3.63018 3.65131 3.68782 3.71696 3.74270 3.84589 3.86860 3.92666 4.04438 4.15130 4.19920 4.23258 4.28693 4.35460 4.39328 4.47144 4.55019 4.58175 4.65474 4.70834 4.77943 4.81597 4.83017 4.87192 4.89045 4.97385 5.01125 5.11627 5.12575 5.13781 5.28603 5.49472 5.62077 5.65030 5.72173 5.72613 5.74903 6.19663 6.24151 6.51482 6.88136 6.94068 7.20907 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.040 4.040 3 Si 0.800 3.200 4 C -0.225 4.225 5 C 0.080 3.920 6 N -0.463 5.463 7 C 0.087 3.913 8 C 0.495 3.505 9 O -0.557 6.557 10 N -0.684 5.684 11 C 0.193 3.807 12 C -0.061 4.061 13 C -0.106 4.106 14 C -0.098 4.098 15 C -0.107 4.107 16 Br -0.058 7.058 17 C -0.096 4.096 18 C -0.112 4.112 19 C -0.145 4.145 20 C 0.089 3.911 21 H 0.088 0.912 22 O -0.561 6.561 23 C -0.141 4.141 24 C 0.095 3.905 25 C -0.130 4.130 26 C -0.108 4.108 27 C -0.154 4.154 28 C -0.091 4.091 29 C -0.117 4.117 30 H 0.393 0.607 31 H 0.087 0.913 32 H -0.297 1.297 33 H -0.296 1.296 34 H 0.205 0.795 35 H 0.163 0.837 36 H 0.142 0.858 37 H 0.421 0.579 38 H 0.134 0.866 39 H 0.137 0.863 40 H 0.143 0.857 41 H 0.152 0.848 42 H 0.103 0.897 43 H 0.115 0.885 44 H 0.399 0.601 45 H 0.107 0.893 46 H 0.055 0.945 47 H 0.132 0.868 48 H 0.143 0.857 49 H 0.134 0.866 50 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.004 6.824 11.873 13.732 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.149 4.149 3 Si 0.706 3.294 4 C -0.232 4.232 5 C -0.045 4.045 6 N -0.145 5.145 7 C -0.038 4.038 8 C 0.280 3.720 9 O -0.433 6.433 10 N -0.337 5.337 11 C 0.105 3.895 12 C -0.063 4.063 13 C -0.125 4.125 14 C -0.118 4.118 15 C -0.186 4.186 16 Br 0.027 6.973 17 C -0.116 4.116 18 C -0.131 4.131 19 C -0.183 4.183 20 C 0.030 3.970 21 H 0.106 0.894 22 O -0.369 6.369 23 C -0.179 4.179 24 C -0.010 4.010 25 C -0.150 4.150 26 C -0.127 4.127 27 C -0.173 4.173 28 C -0.110 4.110 29 C -0.121 4.121 30 H 0.243 0.757 31 H 0.105 0.895 32 H -0.225 1.225 33 H -0.224 1.224 34 H 0.221 0.779 35 H 0.181 0.819 36 H 0.160 0.840 37 H 0.260 0.740 38 H 0.152 0.848 39 H 0.155 0.845 40 H 0.161 0.839 41 H 0.170 0.830 42 H 0.121 0.879 43 H 0.134 0.866 44 H 0.250 0.750 45 H 0.126 0.874 46 H 0.074 0.926 47 H 0.150 0.850 48 H 0.161 0.839 49 H 0.152 0.848 50 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 1.989 5.966 9.887 11.718 hybrid contribution 0.158 -0.434 -0.028 0.463 sum 2.148 5.532 9.859 11.507 Atomic orbital electron populations 1.86451 1.17689 1.82380 1.50201 1.24544 0.84741 1.10270 0.95386 0.94144 0.76636 0.73713 0.84947 1.20762 1.11986 0.91914 0.98579 1.22021 0.98786 0.95269 0.88435 1.43398 1.51811 1.03748 1.15581 1.21987 0.88821 1.09021 0.83953 1.21352 0.90343 0.76366 0.83935 1.90819 1.75463 1.47657 1.29409 1.45295 1.05676 1.68798 1.13956 1.19939 0.81399 0.88833 0.99280 1.20166 0.93783 0.95327 0.97037 1.21033 0.99929 0.91621 0.99915 1.21260 0.94782 0.97440 0.98279 1.21960 0.97373 0.90888 1.08393 1.96751 1.93742 1.10081 1.96734 1.21311 0.99438 0.92352 0.98509 1.21182 0.96635 0.95831 0.99439 1.23991 1.01424 0.95874 0.96978 1.22623 0.90466 0.89222 0.94730 0.89412 1.86452 1.43924 1.49368 1.57184 1.23551 1.01270 0.95881 0.97220 1.18338 1.01407 0.87011 0.94290 1.20199 1.04456 0.89075 1.01315 1.21094 0.98326 0.98992 0.94334 1.20885 1.02469 0.96927 0.97035 1.20427 0.99348 0.91855 0.99345 1.19345 1.04019 0.93832 0.94911 0.75691 0.89539 1.22457 1.22407 0.77853 0.81928 0.84012 0.74014 0.84808 0.84520 0.83938 0.83024 0.87870 0.86641 0.75042 0.87449 0.92643 0.84996 0.83910 0.84846 0.86721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.75 12.88 -148.98 -1.92 -4.67 16 2 C -0.04 -0.21 3.06 71.23 0.22 0.01 16 3 Si 0.80 0.55 30.76 68.60 2.11 2.66 16 4 C -0.23 -1.48 5.57 -18.63 -0.10 -1.58 16 5 C 0.08 0.11 9.89 83.00 0.82 0.93 16 6 N -0.46 -0.80 2.27 -519.99 -1.18 -1.98 16 7 C 0.09 -0.61 6.48 85.63 0.56 -0.05 16 8 C 0.49 -0.52 6.39 87.66 0.56 0.05 16 9 O -0.56 -5.82 14.84 -3.03 -0.05 -5.87 16 10 N -0.68 4.62 3.75 -423.93 -1.59 3.03 16 11 C 0.19 -0.82 0.94 3.38 0.00 -0.82 16 12 C -0.06 0.01 4.89 -19.86 -0.10 -0.08 16 13 C -0.11 -0.10 8.98 22.27 0.20 0.10 16 14 C -0.10 -0.30 9.79 22.28 0.22 -0.08 16 15 C -0.11 -0.46 6.22 22.31 0.14 -0.32 16 16 Br -0.06 -0.28 33.70 -20.37 -0.69 -0.97 16 17 C -0.10 -0.21 9.79 22.29 0.22 0.01 16 18 C -0.11 0.03 8.71 22.27 0.19 0.22 16 19 C -0.14 1.46 7.12 31.12 0.22 1.68 16 20 C 0.09 -0.68 5.28 31.11 0.16 -0.52 16 21 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 22 O -0.56 4.24 13.09 -148.98 -1.95 2.29 16 23 C -0.14 0.17 6.56 31.12 0.20 0.37 16 24 C 0.09 0.73 6.80 39.03 0.27 0.99 16 25 C -0.13 -0.76 10.00 22.37 0.22 -0.53 16 26 C -0.11 -0.66 10.01 22.29 0.22 -0.44 16 27 C -0.15 -1.27 9.97 22.03 0.22 -1.05 16 28 C -0.09 -1.02 10.05 22.23 0.22 -0.80 16 29 C -0.12 -1.29 6.35 -20.20 -0.13 -1.41 16 30 H 0.39 -1.70 8.70 -74.06 -0.64 -2.34 16 31 H 0.09 0.78 7.96 -2.39 -0.02 0.76 16 32 H -0.30 -2.23 7.11 99.48 0.71 -1.52 16 33 H -0.30 -2.22 7.11 99.48 0.71 -1.51 16 34 H 0.20 -1.41 6.35 -2.91 -0.02 -1.43 16 35 H 0.16 -2.42 8.12 -2.39 -0.02 -2.44 16 36 H 0.14 -1.71 8.14 -2.38 -0.02 -1.73 16 37 H 0.42 -5.68 8.69 -92.71 -0.81 -6.48 16 38 H 0.13 -0.33 6.73 -2.91 -0.02 -0.34 16 39 H 0.14 0.13 8.06 -2.91 -0.02 0.11 16 40 H 0.14 -0.06 8.06 -2.91 -0.02 -0.08 16 41 H 0.15 -0.78 6.54 -2.91 -0.02 -0.79 16 42 H 0.10 -1.37 8.10 -2.39 -0.02 -1.39 16 43 H 0.12 -1.30 7.79 -2.39 -0.02 -1.32 16 44 H 0.40 -6.30 9.12 -74.06 -0.68 -6.98 16 45 H 0.11 -0.28 6.22 -2.39 -0.01 -0.29 16 46 H 0.05 0.38 6.95 -2.38 -0.02 0.37 16 47 H 0.13 0.10 8.06 -2.92 -0.02 0.07 16 48 H 0.14 0.17 8.06 -2.91 -0.02 0.15 16 49 H 0.13 0.58 8.06 -2.91 -0.02 0.56 16 50 H 0.11 1.22 8.06 -2.91 -0.02 1.20 16 Total: 0.00 -33.41 434.25 -1.77 -35.18 By element: Atomic # 1 Polarization: -25.28 SS G_CDS: -1.06 Total: -26.34 kcal Atomic # 6 Polarization: -7.87 SS G_CDS: 4.54 Total: -3.33 kcal Atomic # 7 Polarization: 3.82 SS G_CDS: -2.77 Total: 1.05 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -3.91 Total: -8.25 kcal Atomic # 14 Polarization: 0.55 SS G_CDS: 2.11 Total: 2.66 kcal Atomic # 35 Polarization: -0.28 SS G_CDS: -0.69 Total: -0.97 kcal Total: -33.41 -1.77 -35.18 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_9818708.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.633 kcal (2) G-P(sol) polarization free energy of solvation -33.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.226 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.772 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.180 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds