Wall clock time and date at job start Sat Mar 6 2021 23:47:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36770 * 125.79969 * 2 1 4 4 C 1.47264 * 126.94365 * 359.97438 * 3 2 1 5 5 O 1.21629 * 119.99866 * 359.97438 * 4 3 2 6 6 N 1.34773 * 120.00544 * 179.97438 * 4 3 2 7 7 C 1.46503 * 120.00389 * 185.41825 * 6 4 3 8 8 C 1.50696 * 112.84907 * 284.42302 * 7 6 4 9 9 C 1.38241 * 119.98932 * 166.70462 * 8 7 6 10 10 C 1.38216 * 120.00846 * 179.76873 * 9 8 7 11 11 C 1.38323 * 119.99332 * 0.50140 * 10 9 8 12 12 Br 1.89096 * 120.01257 * 179.76910 * 11 10 9 13 13 C 1.38328 * 119.97614 * 359.75210 * 11 10 9 14 14 C 1.38214 * 119.99269 * 359.97438 * 13 11 10 15 15 C 1.53784 * 113.61330 * 153.11434 * 7 6 4 16 16 C 1.53781 * 87.07732 * 270.88640 * 15 7 6 17 17 H 1.09007 * 113.68705 * 220.00624 * 16 15 7 18 18 O 1.42901 * 113.61329 * 89.12145 * 16 15 7 19 19 C 1.53776 * 87.08683 * 334.56812 * 16 15 7 20 20 C 1.46685 * 106.11827 * 180.25082 * 3 2 1 21 21 C 1.34486 * 106.32905 * 359.62346 * 20 3 2 22 22 C 1.50698 * 125.57254 * 180.08964 * 21 20 3 23 23 O 1.42899 * 109.47482 * 65.31312 * 22 21 20 24 24 Si 1.86303 * 109.47187 * 185.31386 * 22 21 20 25 25 N 1.34654 * 125.80359 * 180.02562 * 2 1 3 26 26 H 1.08994 * 109.47277 * 90.00172 * 1 2 3 27 27 H 1.09007 * 109.46758 * 209.99888 * 1 2 3 28 28 H 1.09002 * 109.47141 * 329.99394 * 1 2 3 29 29 H 0.97004 * 119.99304 * 5.41808 * 6 4 3 30 30 H 1.07998 * 119.99286 * 0.02562 * 9 8 7 31 31 H 1.08002 * 120.00384 * 180.27523 * 10 9 8 32 32 H 1.07996 * 120.00155 * 180.02562 * 13 11 10 33 33 H 1.07997 * 119.99657 * 179.97438 * 14 13 11 34 34 H 1.08995 * 113.61388 * 156.33516 * 15 7 6 35 35 H 1.09000 * 113.61181 * 25.43476 * 15 7 6 36 36 H 0.96701 * 114.00506 * 82.50025 * 18 16 15 37 37 H 1.08996 * 113.61865 * 139.98265 * 19 16 15 38 38 H 1.09001 * 113.61381 * 270.89238 * 19 16 15 39 39 H 1.08001 * 126.83505 * 179.75450 * 20 3 2 40 40 H 1.09008 * 109.46876 * 305.31293 * 22 21 20 41 41 H 0.96698 * 113.99725 * 59.99850 * 23 22 21 42 42 H 1.48497 * 109.99980 * 58.68373 * 24 22 21 43 43 H 1.48506 * 109.99892 * 179.97438 * 24 22 21 44 44 H 0.97000 * 124.84991 * 359.95200 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8702 2.5156 -0.0005 5 8 0.6838 2.7839 -0.0015 6 7 2.7848 3.5055 0.0001 7 6 2.3542 4.9008 0.1193 8 6 1.7603 5.4409 -1.1559 9 6 1.0603 6.6329 -1.1416 10 6 0.5194 7.1311 -2.3119 11 6 0.6697 6.4317 -3.4957 12 35 -0.0756 7.1095 -5.0960 13 6 1.3657 5.2363 -3.5087 14 6 1.9111 4.7417 -2.3389 15 6 3.4150 5.8214 0.7454 16 6 2.8076 5.4613 2.1115 17 1 2.7443 6.3051 2.7988 18 8 3.3902 4.3014 2.7092 19 6 1.4943 5.1757 1.3643 20 6 3.6882 0.6153 -0.0062 21 6 3.6096 -0.7273 -0.0008 22 6 4.7820 -1.6741 -0.0023 23 8 5.5113 -1.5311 1.2183 24 14 4.1656 -3.4255 -0.1558 25 7 2.2947 -1.0921 -0.0005 26 1 -0.3633 0.0000 -1.0276 27 1 -0.3633 -0.8901 0.5139 28 1 -0.3633 0.8899 0.5139 29 1 3.7282 3.2940 -0.0785 30 1 0.9396 7.1770 -0.2165 31 1 -0.0236 8.0646 -2.3013 32 1 1.4837 4.6901 -4.4328 33 1 2.4542 3.8082 -2.3489 34 1 3.2953 6.8711 0.4773 35 1 4.4362 5.4637 0.6137 36 1 4.2164 4.4747 3.1807 37 1 0.9649 4.2968 1.7321 38 1 0.8495 6.0489 1.2653 39 1 4.5889 1.2111 -0.0115 40 1 5.4343 -1.4433 -0.8445 41 1 4.9918 -1.7214 2.0114 42 1 3.3787 -3.5792 -1.4057 43 1 5.3124 -4.3691 -0.1590 44 1 1.9734 -2.0073 -0.0002 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12891094_9865296.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:47:46 Heat of formation + Delta-G solvation = -1.664918 kcal Electronic energy + Delta-G solvation = -30734.767982 eV Core-core repulsion = 26473.898828 eV Total energy + Delta-G solvation = -4260.869154 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -42.53853 -41.88205 -39.71064 -39.07850 -37.70887 -36.19104 -34.10579 -33.15076 -32.78351 -32.17004 -31.71989 -30.28832 -28.91494 -26.94489 -26.18216 -25.11177 -23.95479 -23.30886 -22.29555 -21.56197 -20.63130 -20.13699 -18.68429 -18.62413 -17.83893 -17.64869 -17.12428 -16.75058 -16.44416 -16.37011 -16.03800 -15.77884 -15.46214 -15.37808 -15.00358 -14.80967 -14.60231 -14.46398 -14.37366 -14.27286 -14.08505 -13.87870 -13.63019 -13.37346 -13.23199 -13.01344 -12.66697 -12.55429 -12.53894 -12.37136 -12.24247 -12.21724 -11.64753 -11.38902 -11.31030 -10.87812 -10.79303 -10.44809 -10.05342 -10.04745 -9.79419 -9.53681 -9.14350 -5.15944 0.02126 0.28640 0.60732 0.74203 1.14937 1.26268 1.50986 1.83866 2.02076 2.36483 2.51750 2.59296 3.18515 3.44345 3.49654 3.61781 3.69291 3.71969 3.76586 3.83404 3.89862 3.90608 4.18313 4.24544 4.29345 4.40753 4.43498 4.45058 4.52830 4.62990 4.70396 4.70975 4.78901 4.85622 4.88215 4.94050 5.02402 5.04315 5.08125 5.18120 5.18439 5.26271 5.39938 5.70057 5.76257 5.77325 5.87682 6.44225 6.69321 6.71746 6.96464 7.43188 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.115 3.885 3 C -0.261 4.261 4 C 0.595 3.405 5 O -0.573 6.573 6 N -0.688 5.688 7 C 0.190 3.810 8 C -0.059 4.059 9 C -0.108 4.108 10 C -0.093 4.093 11 C -0.106 4.106 12 Br -0.058 7.058 13 C -0.100 4.100 14 C -0.108 4.108 15 C -0.149 4.149 16 C 0.086 3.914 17 H 0.093 0.907 18 O -0.563 6.563 19 C -0.136 4.136 20 C -0.137 4.137 21 C -0.024 4.024 22 C -0.037 4.037 23 O -0.548 6.548 24 Si 0.764 3.236 25 N -0.534 5.534 26 H 0.078 0.922 27 H 0.092 0.908 28 H 0.081 0.919 29 H 0.409 0.591 30 H 0.157 0.843 31 H 0.148 0.852 32 H 0.133 0.867 33 H 0.123 0.877 34 H 0.121 0.879 35 H 0.092 0.908 36 H 0.396 0.604 37 H 0.058 0.942 38 H 0.117 0.883 39 H 0.153 0.847 40 H 0.123 0.877 41 H 0.396 0.604 42 H -0.279 1.279 43 H -0.290 1.290 44 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.886 -1.352 4.846 5.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.004 4.004 3 C -0.271 4.271 4 C 0.385 3.615 5 O -0.454 6.454 6 N -0.338 5.338 7 C 0.103 3.897 8 C -0.061 4.061 9 C -0.127 4.127 10 C -0.112 4.112 11 C -0.186 4.186 12 Br 0.028 6.972 13 C -0.120 4.120 14 C -0.127 4.127 15 C -0.187 4.187 16 C 0.027 3.973 17 H 0.111 0.889 18 O -0.371 6.371 19 C -0.174 4.174 20 C -0.161 4.161 21 C -0.133 4.133 22 C -0.148 4.148 23 O -0.355 6.355 24 Si 0.669 3.331 25 N -0.135 5.135 26 H 0.097 0.903 27 H 0.111 0.889 28 H 0.100 0.900 29 H 0.246 0.754 30 H 0.175 0.825 31 H 0.165 0.835 32 H 0.151 0.849 33 H 0.141 0.859 34 H 0.139 0.861 35 H 0.111 0.889 36 H 0.246 0.754 37 H 0.077 0.923 38 H 0.135 0.865 39 H 0.171 0.829 40 H 0.140 0.860 41 H 0.246 0.754 42 H -0.206 1.206 43 H -0.216 1.216 44 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges 1.761 -1.927 3.138 4.082 hybrid contribution 1.112 -0.048 -0.170 1.126 sum 2.873 -1.975 2.968 4.579 Atomic orbital electron populations 1.20587 0.86239 1.04696 1.03719 1.20518 0.94191 0.85662 1.00057 1.20222 0.94052 0.91889 1.20937 1.17460 0.84998 0.84582 0.74466 1.90733 1.17825 1.84770 1.52068 1.45131 1.10062 1.03932 1.74684 1.19988 0.97163 0.82046 0.90520 1.20218 0.96630 0.94593 0.94676 1.21205 0.97081 0.95670 0.98755 1.21323 0.98983 1.00131 0.90803 1.21930 1.04768 0.98943 0.92913 1.96734 1.83328 1.86436 1.30725 1.21204 0.96839 0.94543 0.99399 1.21002 0.99927 0.99788 0.91941 1.24022 0.98538 1.00360 0.95785 1.22685 0.93179 0.88422 0.92994 0.88896 1.86516 1.43915 1.33480 1.73179 1.23543 0.96674 1.03113 0.94051 1.21919 0.95372 0.93202 1.05624 1.20667 0.84733 0.95608 1.12254 1.24581 0.92147 1.07294 0.90803 1.86513 1.40434 1.92919 1.15677 0.94338 0.81635 0.72556 0.84592 1.41649 1.05153 1.08700 1.57965 0.90303 0.88933 0.90030 0.75424 0.82504 0.83462 0.84945 0.85896 0.86123 0.88921 0.75436 0.92296 0.86475 0.82945 0.86026 0.75422 1.20571 1.21644 0.73270 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.11 9.88 71.24 0.70 0.59 16 2 C 0.12 0.32 7.17 41.78 0.30 0.62 16 3 C -0.26 -1.42 6.29 -19.04 -0.12 -1.54 16 4 C 0.59 4.78 6.69 86.62 0.58 5.36 16 5 O -0.57 -8.03 13.20 -4.12 -0.05 -8.09 16 6 N -0.69 -1.69 3.55 -427.29 -1.52 -3.21 16 7 C 0.19 0.18 0.95 3.38 0.00 0.19 16 8 C -0.06 -0.20 4.98 -19.86 -0.10 -0.30 16 9 C -0.11 -0.13 8.72 22.27 0.19 0.06 16 10 C -0.09 -0.28 9.79 22.28 0.22 -0.06 16 11 C -0.11 -0.62 6.22 22.31 0.14 -0.48 16 12 Br -0.06 -0.32 33.70 -20.37 -0.69 -1.01 16 13 C -0.10 -0.62 9.79 22.29 0.22 -0.40 16 14 C -0.11 -0.62 9.15 22.27 0.20 -0.42 16 15 C -0.15 0.77 7.14 31.12 0.22 1.00 16 16 C 0.09 -0.29 5.28 31.12 0.16 -0.13 16 17 H 0.09 -0.67 8.14 -2.38 -0.02 -0.69 16 18 O -0.56 0.61 13.09 -148.98 -1.95 -1.33 16 19 C -0.14 -0.25 6.52 31.12 0.20 -0.05 16 20 C -0.14 -0.24 10.45 23.62 0.25 0.01 16 21 C -0.02 0.03 6.09 40.98 0.25 0.28 16 22 C -0.04 0.13 2.98 71.24 0.21 0.34 16 23 O -0.55 1.41 12.88 -148.98 -1.92 -0.51 16 24 Si 0.76 -4.32 30.96 68.60 2.12 -2.20 16 25 N -0.53 1.30 5.41 -171.07 -0.93 0.38 16 26 H 0.08 0.09 8.14 -2.39 -0.02 0.07 16 27 H 0.09 -0.42 8.14 -2.38 -0.02 -0.44 16 28 H 0.08 0.53 6.47 -2.39 -0.02 0.51 16 29 H 0.41 -0.41 7.89 -92.71 -0.73 -1.14 16 30 H 0.16 -0.71 6.54 -2.91 -0.02 -0.73 16 31 H 0.15 -0.07 8.06 -2.91 -0.02 -0.09 16 32 H 0.13 0.60 8.06 -2.91 -0.02 0.58 16 33 H 0.12 0.69 6.95 -2.91 -0.02 0.67 16 34 H 0.12 -0.96 7.80 -2.39 -0.02 -0.98 16 35 H 0.09 -0.62 8.13 -2.39 -0.02 -0.64 16 36 H 0.40 -3.72 9.12 -74.06 -0.68 -4.40 16 37 H 0.06 0.57 6.71 -2.39 -0.02 0.56 16 38 H 0.12 -0.20 6.21 -2.39 -0.01 -0.21 16 39 H 0.15 -0.13 7.71 -2.91 -0.02 -0.15 16 40 H 0.12 -0.35 7.96 -2.38 -0.02 -0.37 16 41 H 0.40 -3.93 8.70 -74.06 -0.64 -4.57 16 42 H -0.28 0.27 7.11 99.48 0.71 0.98 16 43 H -0.29 -0.62 7.11 99.48 0.71 0.09 16 44 H 0.43 -3.52 6.72 -92.71 -0.62 -4.14 16 Total: 0.00 -23.21 382.53 -2.82 -26.03 By element: Atomic # 1 Polarization: -13.58 SS G_CDS: -1.53 Total: -15.11 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: 3.64 Total: 5.05 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -2.44 Total: -2.83 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -3.92 Total: -9.93 kcal Atomic # 14 Polarization: -4.32 SS G_CDS: 2.12 Total: -2.20 kcal Atomic # 35 Polarization: -0.32 SS G_CDS: -0.69 Total: -1.01 kcal Total: -23.21 -2.82 -26.03 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891094_9865296.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.362 kcal (2) G-P(sol) polarization free energy of solvation -23.207 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.155 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.027 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.665 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds