Wall clock time and date at job start Sat Mar 6 2021 23:48:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35663 * 116.99521 * 2 1 4 4 C 1.38393 * 120.12406 * 0.02562 * 3 2 1 5 5 C 1.38725 * 120.03471 * 179.97438 * 4 3 2 6 6 O 1.35711 * 119.86501 * 179.97438 * 5 4 3 7 7 C 1.42897 * 117.00220 * 359.97438 * 6 5 4 8 8 C 1.39147 * 120.27355 * 359.97367 * 5 4 3 9 9 C 1.50700 * 119.88069 * 179.74324 * 8 5 4 10 10 O 1.42901 * 109.46703 * 75.00317 * 9 8 5 11 11 Si 1.86295 * 109.47090 * 194.99826 * 9 8 5 12 12 C 1.37584 * 120.23646 * 0.02562 * 8 5 4 13 13 C 1.39815 * 119.96422 * 0.02562 * 12 8 5 14 14 C 1.47308 * 120.13185 * 179.97438 * 13 12 8 15 15 O 1.21624 * 119.99781 * 179.97438 * 14 13 12 16 16 N 1.34770 * 120.00111 * 359.97438 * 14 13 12 17 17 C 1.46506 * 119.99985 * 175.03933 * 16 14 13 18 18 C 1.50699 * 112.85060 * 291.22740 * 17 16 14 19 19 C 1.38241 * 119.99750 * 346.58425 * 18 17 16 20 20 C 1.38230 * 119.99932 * 179.76755 * 19 18 17 21 21 C 1.38234 * 120.00180 * 0.50433 * 20 19 18 22 22 C 1.38235 * 119.99612 * 359.74822 * 21 20 19 23 23 C 1.38230 * 120.00414 * 359.97438 * 22 21 20 24 24 C 1.53778 * 113.61236 * 159.92189 * 17 16 14 25 25 C 1.53784 * 87.08201 * 270.88054 * 24 17 16 26 26 H 1.08999 * 113.61367 * 220.02196 * 25 24 17 27 27 O 1.42905 * 113.68680 * 89.12872 * 25 24 17 28 28 C 1.53773 * 113.61542 * 62.42535 * 17 16 14 29 29 H 1.08999 * 109.47114 * 59.99614 * 1 2 3 30 30 H 1.09000 * 109.46815 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47107 * 299.99619 * 1 2 3 32 32 H 1.08006 * 119.98721 * 359.97438 * 4 3 2 33 33 H 1.09006 * 109.47251 * 299.99938 * 7 6 5 34 34 H 1.09002 * 109.47006 * 59.99961 * 7 6 5 35 35 H 1.08999 * 109.47617 * 179.97438 * 7 6 5 36 36 H 1.08997 * 109.47255 * 315.00605 * 9 8 5 37 37 H 0.96702 * 114.00385 * 59.99807 * 10 9 8 38 38 H 1.48498 * 109.99975 * 179.97438 * 11 9 8 39 39 H 1.48498 * 110.00301 * 301.32261 * 11 9 8 40 40 H 1.08006 * 120.01540 * 179.97438 * 12 8 5 41 41 H 0.96999 * 120.00443 * 355.03215 * 16 14 13 42 42 H 1.08005 * 119.99893 * 359.97438 * 19 18 17 43 43 H 1.08001 * 120.00442 * 180.23364 * 20 19 18 44 44 H 1.07992 * 120.00612 * 179.72683 * 21 20 19 45 45 H 1.08002 * 120.00209 * 179.97438 * 22 21 20 46 46 H 1.07999 * 120.00663 * 179.97438 * 23 22 21 47 47 H 1.09003 * 113.61800 * 25.43184 * 24 17 16 48 48 H 1.09007 * 113.61058 * 156.33443 * 24 17 16 49 49 H 0.96696 * 113.99690 * 82.46765 * 27 25 24 50 50 H 1.08997 * 113.61809 * 203.66496 * 28 17 16 51 51 H 1.09003 * 113.61595 * 334.47995 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 1.2935 2.3710 0.0005 5 6 1.9251 3.6062 0.0011 6 8 1.1850 4.7437 0.0011 7 6 -0.2360 4.5931 -0.0001 8 6 3.3144 3.6836 0.0016 9 6 3.9914 5.0300 -0.0036 10 8 3.8930 5.6176 1.2952 11 14 5.7864 4.8208 -0.4562 12 6 4.0723 2.5353 0.0011 13 6 3.4461 1.2852 -0.0005 14 6 4.2539 0.0534 -0.0016 15 8 3.7066 -1.0327 -0.0026 16 7 5.5994 0.1300 -0.0016 17 6 6.4026 -1.0905 0.1070 18 6 6.2966 -1.7422 1.4616 19 6 5.7367 -1.0504 2.5195 20 6 5.6351 -1.6499 3.7609 21 6 6.1027 -2.9373 3.9471 22 6 6.6673 -3.6271 2.8906 23 6 6.7638 -3.0298 1.6478 24 6 7.8494 -0.9216 -0.3859 25 6 7.3375 -1.3190 -1.7805 26 1 8.0170 -1.9752 -2.3245 27 8 6.8890 -0.2116 -2.5645 28 6 6.2009 -2.0668 -1.0638 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 0.2148 2.3165 0.0005 33 1 -0.5426 4.0443 -0.8906 34 1 -0.5439 4.0434 0.8894 35 1 -0.7057 5.5767 0.0005 36 1 3.5058 5.6779 -0.7333 37 1 4.3048 5.0939 1.9961 38 1 6.4651 6.1415 -0.4655 39 1 6.4522 3.9138 0.5130 40 1 5.1505 2.5995 0.0011 41 1 6.0362 0.9931 -0.0736 42 1 5.3757 -0.0428 2.3752 43 1 5.1942 -1.1109 4.5865 44 1 6.0274 -3.4041 4.9180 45 1 7.0331 -4.6329 3.0361 46 1 7.2053 -3.5685 0.8224 47 1 8.2128 0.1045 -0.3302 48 1 8.5445 -1.6419 0.0456 49 1 7.5993 0.2627 -3.0177 50 1 6.4453 -3.1002 -0.8177 51 1 5.2328 -1.9663 -1.5544 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12891110_12297780.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 23:48:12 Heat of formation + Delta-G solvation = -78.966951 kcal Electronic energy + Delta-G solvation = -37903.552557 eV Core-core repulsion = 33123.447105 eV Total energy + Delta-G solvation = -4780.105452 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -42.21691 -41.64016 -40.10842 -39.36993 -39.03145 -38.40584 -36.95836 -36.11450 -33.95859 -32.17899 -31.85989 -31.54595 -31.24706 -29.04294 -28.23256 -26.92941 -26.14406 -25.82854 -24.40022 -23.41690 -22.82567 -22.27337 -21.41568 -20.17202 -19.95544 -18.82599 -18.52079 -18.18498 -17.94678 -17.63843 -17.16982 -16.81614 -16.57881 -16.47898 -16.31825 -16.27438 -15.83610 -15.72100 -15.61836 -15.46129 -15.34955 -15.07944 -14.83871 -14.44791 -14.26245 -14.22893 -13.97455 -13.85108 -13.60747 -13.40495 -13.26499 -13.13092 -12.82764 -12.73067 -12.58246 -12.49985 -12.30643 -12.17817 -12.11031 -11.81838 -11.77214 -11.63572 -11.34699 -10.93530 -10.53470 -10.47765 -9.88622 -9.83751 -9.69626 -9.44708 -9.07353 -4.99811 -0.12735 0.17256 0.53554 0.62484 1.25659 1.49093 1.90411 1.97143 2.09555 2.17039 2.20926 2.79054 2.90327 3.09911 3.43897 3.47131 3.48566 3.61792 3.66809 3.76497 3.77664 3.80934 3.92518 4.02933 4.08206 4.12518 4.17017 4.17288 4.18951 4.20242 4.28624 4.31873 4.37123 4.46135 4.55311 4.61989 4.63313 4.68300 4.70308 4.77231 4.84447 4.89322 4.98848 5.03218 5.08281 5.18162 5.22418 5.23644 5.35904 5.56899 5.67798 5.74137 5.90892 6.05613 6.19793 6.34745 6.47849 6.68782 6.69725 7.52858 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.273 6.273 3 C 0.234 3.766 4 C -0.315 4.315 5 C 0.222 3.778 6 O -0.296 6.296 7 C 0.022 3.978 8 C -0.195 4.195 9 C -0.057 4.057 10 O -0.524 6.524 11 Si 0.681 3.319 12 C -0.013 4.013 13 C -0.205 4.205 14 C 0.571 3.429 15 O -0.507 6.507 16 N -0.704 5.704 17 C 0.201 3.799 18 C -0.071 4.071 19 C -0.103 4.103 20 C -0.118 4.118 21 C -0.122 4.122 22 C -0.117 4.117 23 C -0.113 4.113 24 C -0.164 4.164 25 C 0.080 3.920 26 H 0.073 0.927 27 O -0.543 6.543 28 C -0.129 4.129 29 H 0.057 0.943 30 H 0.106 0.894 31 H 0.056 0.944 32 H 0.144 0.856 33 H 0.059 0.941 34 H 0.058 0.942 35 H 0.106 0.894 36 H 0.118 0.882 37 H 0.372 0.628 38 H -0.253 1.253 39 H -0.258 1.258 40 H 0.139 0.861 41 H 0.398 0.602 42 H 0.115 0.885 43 H 0.119 0.881 44 H 0.121 0.879 45 H 0.123 0.877 46 H 0.123 0.877 47 H 0.081 0.919 48 H 0.105 0.895 49 H 0.380 0.620 50 H 0.104 0.896 51 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.078 0.652 -1.940 2.313 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.183 6.183 3 C 0.185 3.815 4 C -0.334 4.334 5 C 0.174 3.826 6 O -0.207 6.207 7 C -0.073 4.073 8 C -0.197 4.197 9 C -0.167 4.167 10 O -0.330 6.330 11 Si 0.583 3.417 12 C -0.031 4.031 13 C -0.210 4.210 14 C 0.358 3.642 15 O -0.381 6.381 16 N -0.356 5.356 17 C 0.114 3.886 18 C -0.073 4.073 19 C -0.121 4.121 20 C -0.136 4.136 21 C -0.140 4.140 22 C -0.135 4.135 23 C -0.131 4.131 24 C -0.202 4.202 25 C 0.021 3.979 26 H 0.091 0.909 27 O -0.348 6.348 28 C -0.167 4.167 29 H 0.076 0.924 30 H 0.125 0.875 31 H 0.075 0.925 32 H 0.162 0.838 33 H 0.078 0.922 34 H 0.077 0.923 35 H 0.125 0.875 36 H 0.136 0.864 37 H 0.219 0.781 38 H -0.178 1.178 39 H -0.183 1.183 40 H 0.156 0.844 41 H 0.234 0.766 42 H 0.133 0.867 43 H 0.137 0.863 44 H 0.139 0.861 45 H 0.141 0.859 46 H 0.141 0.859 47 H 0.100 0.900 48 H 0.124 0.876 49 H 0.227 0.773 50 H 0.122 0.878 51 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 0.715 0.246 -1.798 1.950 hybrid contribution -0.205 0.585 1.083 1.248 sum 0.511 0.831 -0.714 1.209 Atomic orbital electron populations 1.23231 0.78342 1.04788 1.01267 1.86413 1.21069 1.25016 1.85769 1.18720 0.90636 0.84387 0.87780 1.21295 1.01079 0.91538 1.19501 1.18698 0.90412 0.84655 0.88815 1.86156 1.19389 1.28511 1.86627 1.23207 0.77901 1.04599 1.01612 1.19347 0.90761 0.96206 1.13347 1.24789 1.10693 0.92844 0.88393 1.86651 1.80107 1.49889 1.16354 0.95172 0.74390 0.81975 0.90180 1.20889 0.99277 0.90111 0.92855 1.19064 0.90620 0.93606 1.17669 1.17693 0.81456 0.88571 0.76434 1.90850 1.71235 1.28449 1.47614 1.45350 1.05532 1.08533 1.76227 1.19766 0.91515 0.85972 0.91357 1.19776 0.98762 0.94483 0.94257 1.20906 0.98737 0.99850 0.92604 1.21136 0.99770 0.95523 0.97188 1.21164 0.98859 0.94927 0.99071 1.21114 0.99608 0.99873 0.92954 1.20891 1.00561 0.94238 0.97421 1.24055 0.94806 1.03667 0.97690 1.22715 0.96462 0.88764 0.90001 0.90893 1.86545 1.37376 1.45144 1.65721 1.23489 1.00590 0.97956 0.94696 0.92392 0.87528 0.92500 0.83843 0.92216 0.92322 0.87541 0.86396 0.78107 1.17801 1.18296 0.84362 0.76639 0.86740 0.86286 0.86142 0.85933 0.85947 0.90030 0.87627 0.77317 0.87806 0.88828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.27 -1.13 8.56 -40.61 -0.35 -1.48 16 3 C 0.23 0.76 6.69 -38.74 -0.26 0.50 16 4 C -0.31 -0.42 8.01 -39.34 -0.32 -0.74 16 5 C 0.22 0.38 6.67 -39.06 -0.26 0.12 16 6 O -0.30 -0.46 9.80 -18.84 -0.18 -0.65 16 7 C 0.02 -0.04 9.80 101.05 0.99 0.95 16 8 C -0.20 -0.20 5.27 -104.52 -0.55 -0.75 16 9 C -0.06 -0.03 2.37 36.01 0.09 0.06 16 10 O -0.52 -0.98 12.88 -35.23 -0.45 -1.43 16 11 Si 0.68 -0.86 30.23 -169.99 -5.14 -6.00 16 12 C -0.01 -0.01 8.13 -39.23 -0.32 -0.33 16 13 C -0.21 -0.61 5.89 -104.83 -0.62 -1.23 16 14 C 0.57 2.41 6.25 -12.58 -0.08 2.33 16 15 O -0.51 -3.89 13.56 -16.67 -0.23 -4.12 16 16 N -0.70 -1.05 3.70 -49.03 -0.18 -1.24 16 17 C 0.20 0.26 0.94 -132.16 -0.12 0.13 16 18 C -0.07 -0.19 4.88 -104.62 -0.51 -0.70 16 19 C -0.10 -0.35 8.98 -39.58 -0.36 -0.70 16 20 C -0.12 -0.33 10.05 -39.59 -0.40 -0.73 16 21 C -0.12 -0.27 10.05 -39.58 -0.40 -0.66 16 22 C -0.12 -0.21 10.05 -39.59 -0.40 -0.61 16 23 C -0.11 -0.20 8.71 -39.59 -0.34 -0.55 16 24 C -0.16 0.24 7.13 -25.92 -0.18 0.06 16 25 C 0.08 -0.08 5.27 -25.92 -0.14 -0.21 16 26 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 27 O -0.54 0.35 13.09 -35.23 -0.46 -0.11 16 28 C -0.13 -0.20 6.56 -25.93 -0.17 -0.37 16 29 H 0.06 -0.10 7.66 -51.93 -0.40 -0.49 16 30 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 32 H 0.14 -0.12 4.50 -52.48 -0.24 -0.36 16 33 H 0.06 -0.17 7.65 -51.93 -0.40 -0.57 16 34 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 35 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 36 H 0.12 0.06 7.82 -51.93 -0.41 -0.35 16 37 H 0.37 -0.43 8.70 45.56 0.40 -0.03 16 38 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 39 H -0.26 0.17 6.69 56.52 0.38 0.55 16 40 H 0.14 -0.21 3.18 -52.48 -0.17 -0.38 16 41 H 0.40 -0.25 6.72 -40.82 -0.27 -0.53 16 42 H 0.11 0.36 6.74 -52.48 -0.35 0.00 16 43 H 0.12 0.15 8.06 -52.49 -0.42 -0.27 16 44 H 0.12 0.05 8.06 -52.49 -0.42 -0.38 16 45 H 0.12 -0.02 8.06 -52.49 -0.42 -0.45 16 46 H 0.12 -0.04 6.55 -52.49 -0.34 -0.38 16 47 H 0.08 -0.20 8.10 -51.93 -0.42 -0.62 16 48 H 0.11 -0.24 7.79 -51.93 -0.40 -0.64 16 49 H 0.38 -1.87 9.12 45.56 0.42 -1.46 16 50 H 0.10 0.03 6.22 -51.93 -0.32 -0.29 16 51 H 0.09 0.45 6.95 -51.93 -0.36 0.09 16 LS Contribution 408.71 15.07 6.16 6.16 Total: 0.00 -10.90 408.71 -10.01 -20.91 By element: Atomic # 1 Polarization: -3.78 SS G_CDS: -5.82 Total: -9.61 kcal Atomic # 6 Polarization: 0.91 SS G_CDS: -3.35 Total: -2.44 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -0.18 Total: -1.24 kcal Atomic # 8 Polarization: -6.11 SS G_CDS: -1.67 Total: -7.79 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.14 Total: -6.00 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -10.90 -10.01 -20.91 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12891110_12297780.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.057 kcal (2) G-P(sol) polarization free energy of solvation -10.897 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.013 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.910 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.52 seconds